RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 H2AFB1P0C5Y9 115 aa16.14■□□□□ 0.17
PNKP-214ENST00000600573 CHRNA7P36544 502 aa16.14■□□□□ 0.17
PNKP-214ENST00000600573 RAB2AP61019 212 aa16.14■□□□□ 0.17
PNKP-214ENST00000600573 ETV3LQ6ZN32 361 aa16.14■□□□□ 0.17
PNKP-214ENST00000600573 CENPVQ7Z7K6 275 aaPredicted RBP16.14■□□□□ 0.17
PNKP-214ENST00000600573 MRPL41Q8IXM3 137 aaKnown RBP16.14■□□□□ 0.17
PNKP-214ENST00000600573 MMD2Q8IY49 270 aa16.14■□□□□ 0.17
PNKP-214ENST00000600573 TBX15Q96SF7 602 aa16.14■□□□□ 0.17
PNKP-214ENST00000600573 NPY1RP25929 384 aa16.13■□□□□ 0.17
PNKP-214ENST00000600573 DLK1P80370 383 aa16.13■□□□□ 0.17
PNKP-214ENST00000600573 PEA15Q15121 130 aa16.13■□□□□ 0.17
PNKP-214ENST00000600573 TMEM41BQ5BJD5 291 aa16.13■□□□□ 0.17
PNKP-214ENST00000600573 SLC24A4Q8NFF2 622 aa16.13■□□□□ 0.17
PNKP-214ENST00000600573 C1orf159Q96HA4 380 aa16.13■□□□□ 0.17
PNKP-214ENST00000600573 GCN1Q92616 2671 aaKnown RBP16.13■□□□□ 0.17
PNKP-214ENST00000600573 GATA3P23771 443 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 KLRD1Q13241 179 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 GUK1Q16774 197 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 HINT2Q9BX68 163 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 NDUFA4L2Q9NRX3 87 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 CARHSP1Q9Y2V2 147 aaKnown RBP16.12■□□□□ 0.17
PNKP-214ENST00000600573 A0A1B0GW64 132 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 B4DSR2 109 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 C17orf112F2Z3M2 114 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 F8W036 122 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 TIMM23O14925 209 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 SCO1O75880 301 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 CRYGBP07316 175 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 ERHP84090 104 aaKnown RBP16.12■□□□□ 0.17
PNKP-214ENST00000600573 PRB3Q04118 309 aaPredicted RBP16.12■□□□□ 0.17
PNKP-214ENST00000600573 PSG5Q15238 335 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 C10orf91Q5T1B1 145 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 SPSB3Q6PJ21 355 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 ZNF709Q8N972 641 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 PSMG3-AS1Q96PY0 264 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 DCHS2Q6V1P9 2916 aa16.12■□□□□ 0.17
PNKP-214ENST00000600573 IGHV3-72A0A0B4J1Y9 119 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 PRSS46E5RG02 174 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 RRHO14718 337 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 SLC25A17O43808 307 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 VENTXO95231 258 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 MOSP00540 346 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 IFNA4P05014 189 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 MDKP21741 143 aaPredicted RBP16.11■□□□□ 0.17
PNKP-214ENST00000600573 DEFB113Q30KQ7 82 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 LDLRAD2Q5SZI1 272 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 CFHR4Q92496 578 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 NRGNQ92686 78 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 MBD6Q96DN6 1003 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 SEC11CQ9BY50 192 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 KIAA1456Q9P272 454 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 WDR83OSQ9Y284 106 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 HILPDAQ9Y5L2 63 aa16.11■□□□□ 0.17
PNKP-214ENST00000600573 TRAV1-1A0A0B4J248 108 aa16.1■□□□□ 0.17
PNKP-214ENST00000600573 MPDU1O75352 247 aa16.1■□□□□ 0.17
PNKP-214ENST00000600573 ACTL6BO94805 426 aa16.1■□□□□ 0.17
PNKP-214ENST00000600573 MSMBP08118 114 aa16.1■□□□□ 0.17
PNKP-214ENST00000600573 MYOD1P15172 320 aa16.1■□□□□ 0.17
PNKP-214ENST00000600573 ADCYAP1P18509 176 aa16.1■□□□□ 0.17
PNKP-214ENST00000600573 COL8A1P27658 744 aa16.1■□□□□ 0.17
PNKP-214ENST00000600573 ELLP55199 621 aaPredicted RBP16.1■□□□□ 0.17
PNKP-214ENST00000600573 DEFA5Q01523 94 aa16.1■□□□□ 0.17
PNKP-214ENST00000600573 OR2T10Q8NGZ9 312 aa16.1■□□□□ 0.17
PNKP-214ENST00000600573 TMEM170AQ8WVE7 144 aa16.1■□□□□ 0.17
PNKP-214ENST00000600573 RBMXL1Q96E39 390 aaKnown RBP16.1■□□□□ 0.17
PNKP-214ENST00000600573 NPCDR1Q9BY65 106 aa16.1■□□□□ 0.17
PNKP-214ENST00000600573 RPRMQ9NS64 109 aa16.1■□□□□ 0.17
PNKP-214ENST00000600573 SIGLEC9Q9Y336 463 aa16.1■□□□□ 0.17
PNKP-214ENST00000600573 A0A1B0GV50 99 aa16.09■□□□□ 0.17
PNKP-214ENST00000600573 SOX15O60248 233 aa16.09■□□□□ 0.17
PNKP-214ENST00000600573 MBP02144 154 aa16.09■□□□□ 0.17
PNKP-214ENST00000600573 SFTA3P0C7M3 94 aa16.09■□□□□ 0.17
PNKP-214ENST00000600573 EBI3Q14213 229 aa16.09■□□□□ 0.17
PNKP-214ENST00000600573 PRSS8Q16651 343 aa16.09■□□□□ 0.17
PNKP-214ENST00000600573 LHFPL4Q7Z7J7 247 aa16.09■□□□□ 0.17
PNKP-214ENST00000600573 NPBQ8NG41 125 aa16.09■□□□□ 0.17
PNKP-214ENST00000600573 SFT2D1Q8WV19 159 aa16.09■□□□□ 0.17
PNKP-214ENST00000600573 SCRT1Q9BWW7 348 aa16.09■□□□□ 0.17
PNKP-214ENST00000600573 EIF5A2Q9GZV4 153 aaKnown RBP16.09■□□□□ 0.17
PNKP-214ENST00000600573 ZNF430Q9H8G1 570 aaPredicted RBP16.09■□□□□ 0.17
PNKP-214ENST00000600573 TRAV20A0A0B4J274 112 aa16.08■□□□□ 0.17
PNKP-214ENST00000600573 SMCO3A2RU48 225 aa16.08■□□□□ 0.17
PNKP-214ENST00000600573 FNDC10F2Z333 226 aa16.08■□□□□ 0.17
PNKP-214ENST00000600573 CA2P00918 260 aa16.08■□□□□ 0.17
PNKP-214ENST00000600573 BRS3P32247 399 aa16.08■□□□□ 0.17
PNKP-214ENST00000600573 SUB1P53999 127 aaKnown RBP eCLIP16.08■□□□□ 0.17
PNKP-214ENST00000600573 SSX2Q16385 188 aa16.08■□□□□ 0.17
PNKP-214ENST00000600573 PRSS57Q6UWY2 283 aa16.08■□□□□ 0.17
PNKP-214ENST00000600573 PPP1R27Q86WC6 154 aa16.08■□□□□ 0.17
PNKP-214ENST00000600573 SVBPQ8N300 66 aa16.08■□□□□ 0.17
PNKP-214ENST00000600573 HELZ2Q9BYK8 2649 aaKnown RBP16.08■□□□□ 0.16
PNKP-214ENST00000600573 C2orf83Q53S99 150 aa16.08■□□□□ 0.16
PNKP-214ENST00000600573 MBD3L1Q8WWY6 194 aa16.08■□□□□ 0.16
PNKP-214ENST00000600573 RCC1LQ96I51 464 aaKnown RBP16.08■□□□□ 0.16
PNKP-214ENST00000600573 RITA1Q96K30 269 aa16.08■□□□□ 0.16
PNKP-214ENST00000600573 SRSF8Q9BRL6 282 aaKnown RBP16.08■□□□□ 0.16
PNKP-214ENST00000600573 SMDT1Q9H4I9 107 aa16.08■□□□□ 0.16
PNKP-214ENST00000600573 VSIRQ9H7M9 311 aa16.08■□□□□ 0.16
PNKP-214ENST00000600573 METTL1Q9UBP6 276 aaKnown RBP16.08■□□□□ 0.16
PNKP-214ENST00000600573 NPFFO15130 113 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms