RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 NBEAL1Q6ZS30 2694 aa13.12□□□□□ -0.31
USHBP1-210ENST00000600286 TCRBV4S1A1TA0A5B7 111 aa13.11□□□□□ -0.31
USHBP1-210ENST00000600286 IGHG4P01861 327 aa13.11□□□□□ -0.31
USHBP1-210ENST00000600286 PF4V1P10720 104 aa13.11□□□□□ -0.31
USHBP1-210ENST00000600286 DEFA4P12838 97 aa13.11□□□□□ -0.31
USHBP1-210ENST00000600286 SMCO1Q147U7 214 aa13.11□□□□□ -0.31
USHBP1-210ENST00000600286 C10orf55Q5SWW7 151 aa13.11□□□□□ -0.31
USHBP1-210ENST00000600286 C12orf45Q8N5I9 185 aaPredicted RBP13.11□□□□□ -0.31
USHBP1-210ENST00000600286 MINDY2Q8NBR6 621 aa13.11□□□□□ -0.31
USHBP1-210ENST00000600286 OR5T1Q8NG75 326 aa13.11□□□□□ -0.31
USHBP1-210ENST00000600286 OR1S1Q8NH92 325 aa13.11□□□□□ -0.31
USHBP1-210ENST00000600286 COA4Q9NYJ1 87 aa13.11□□□□□ -0.31
USHBP1-210ENST00000600286 FBXO7Q9Y3I1 522 aa13.11□□□□□ -0.31
USHBP1-210ENST00000600286 A0A0B4J293 547 aa13.1□□□□□ -0.31
USHBP1-210ENST00000600286 H3BUA1 57 aa13.1□□□□□ -0.31
USHBP1-210ENST00000600286 P0C879 139 aa13.1□□□□□ -0.31
USHBP1-210ENST00000600286 SLC25A6P12236 298 aa13.1□□□□□ -0.31
USHBP1-210ENST00000600286 PPIFP30405 207 aaKnown RBP13.1□□□□□ -0.31
USHBP1-210ENST00000600286 ERHP84090 104 aaKnown RBP13.1□□□□□ -0.31
USHBP1-210ENST00000600286 IZUMO4Q1ZYL8 232 aa13.1□□□□□ -0.31
USHBP1-210ENST00000600286 KHDC1LQ5JSQ8 128 aa13.1□□□□□ -0.31
USHBP1-210ENST00000600286 TTC9CQ8N5M4 171 aa13.1□□□□□ -0.31
USHBP1-210ENST00000600286 SEC22CQ9BRL7 303 aa13.1□□□□□ -0.31
USHBP1-210ENST00000600286 SLA2Q9H6Q3 261 aa13.1□□□□□ -0.31
USHBP1-210ENST00000600286 PLEKHA3Q9HB20 300 aa13.1□□□□□ -0.31
USHBP1-210ENST00000600286 NDUFA4L2Q9NRX3 87 aa13.1□□□□□ -0.31
USHBP1-210ENST00000600286 ZFP57Q9NU63 452 aa13.1□□□□□ -0.31
USHBP1-210ENST00000600286 HMX3A6NHT5 357 aa13.09□□□□□ -0.31
USHBP1-210ENST00000600286 SNRPGP15A8MWD9 76 aa13.09□□□□□ -0.31
USHBP1-210ENST00000600286 APELAP0DMC3 54 aa13.09□□□□□ -0.31
USHBP1-210ENST00000600286 SPCS3P61009 180 aa13.09□□□□□ -0.31
USHBP1-210ENST00000600286 SSBP2P81877 361 aaPredicted RBP13.09□□□□□ -0.31
USHBP1-210ENST00000600286 NMSQ5H8A3 153 aa13.09□□□□□ -0.31
USHBP1-210ENST00000600286 GGNBP1Q5YKI7 109 aa13.09□□□□□ -0.31
USHBP1-210ENST00000600286 C11orf44Q8N8P7 122 aa13.09□□□□□ -0.31
USHBP1-210ENST00000600286 OR52B4Q8NGK2 314 aa13.09□□□□□ -0.31
USHBP1-210ENST00000600286 OR52E5Q8NH55 327 aa13.09□□□□□ -0.31
USHBP1-210ENST00000600286 FAM110DQ8TAY7 271 aaPredicted RBP13.09□□□□□ -0.31
USHBP1-210ENST00000600286 TSSC4Q9Y5U2 329 aaPredicted RBP13.09□□□□□ -0.31
USHBP1-210ENST00000600286 A0A0G2JRQ6 117 aa13.08□□□□□ -0.32
USHBP1-210ENST00000600286 NPIPB5A8MRT5 1133 aa13.08□□□□□ -0.32
USHBP1-210ENST00000600286 TEX22C9J3V5 150 aa13.08□□□□□ -0.32
USHBP1-210ENST00000600286 ST8SIA3O43173 380 aa13.08□□□□□ -0.32
USHBP1-210ENST00000600286 OR13C7P0DN81 318 aa13.08□□□□□ -0.32
USHBP1-210ENST00000600286 CD28P10747 220 aa13.08□□□□□ -0.32
USHBP1-210ENST00000600286 MYOD1P15172 320 aa13.08□□□□□ -0.32
USHBP1-210ENST00000600286 HIST1H1BP16401 226 aaKnown RBP13.08□□□□□ -0.32
USHBP1-210ENST00000600286 PSMB6P28072 239 aa13.08□□□□□ -0.32
USHBP1-210ENST00000600286 SNCAP37840 140 aa13.08□□□□□ -0.32
USHBP1-210ENST00000600286 HOXA1P49639 335 aaPredicted RBP13.08□□□□□ -0.32
USHBP1-210ENST00000600286 PRCDQ00LT1 54 aa13.08□□□□□ -0.32
USHBP1-210ENST00000600286 CFHR3Q02985 330 aa13.08□□□□□ -0.32
USHBP1-210ENST00000600286 OR1L6Q8NGR2 347 aa13.08□□□□□ -0.32
USHBP1-210ENST00000600286 CITED1Q99966 193 aa13.08□□□□□ -0.32
USHBP1-210ENST00000600286 THYN1Q9P016 225 aa13.08□□□□□ -0.32
USHBP1-210ENST00000600286 A0A0G2JLM5 398 aa13.07□□□□□ -0.32
USHBP1-210ENST00000600286 CEBPZOSA8MTT3 80 aa13.07□□□□□ -0.32
USHBP1-210ENST00000600286 MED6O75586 246 aa13.07□□□□□ -0.32
USHBP1-210ENST00000600286 IGLV1-40P01703 118 aa13.07□□□□□ -0.32
USHBP1-210ENST00000600286 TRGV3P03979 118 aa13.07□□□□□ -0.32
USHBP1-210ENST00000600286 RAB9AP51151 201 aa13.07□□□□□ -0.32
USHBP1-210ENST00000600286 SUB1P53999 127 aaKnown RBP eCLIP13.07□□□□□ -0.32
USHBP1-210ENST00000600286 CD83Q01151 205 aa13.07□□□□□ -0.32
USHBP1-210ENST00000600286 Q6ZRM9 215 aa13.07□□□□□ -0.32
USHBP1-210ENST00000600286 WIPF2Q8TF74 440 aaPredicted RBP13.07□□□□□ -0.32
USHBP1-210ENST00000600286 MS4A10Q96PG2 267 aa13.07□□□□□ -0.32
USHBP1-210ENST00000600286 HIPK2Q9H2X6 1198 aa13.07□□□□□ -0.32
USHBP1-210ENST00000600286 C13orf42A0A1B0GVH6 325 aa13.06□□□□□ -0.32
USHBP1-210ENST00000600286 C5orf51A6NDU8 294 aa13.06□□□□□ -0.32
USHBP1-210ENST00000600286 NUDT19A8MXV4 375 aa13.06□□□□□ -0.32
USHBP1-210ENST00000600286 E7EUB6 86 aa13.06□□□□□ -0.32
USHBP1-210ENST00000600286 SSNA1O43805 119 aa13.06□□□□□ -0.32
USHBP1-210ENST00000600286 ADAP1O75689 374 aa13.06□□□□□ -0.32
USHBP1-210ENST00000600286 BRI3O95415 125 aa13.06□□□□□ -0.32
USHBP1-210ENST00000600286 PSMB8P28062 276 aa13.06□□□□□ -0.32
USHBP1-210ENST00000600286 TPPP2P59282 170 aa13.06□□□□□ -0.32
USHBP1-210ENST00000600286 C19orf54Q5BKX5 351 aa13.06□□□□□ -0.32
USHBP1-210ENST00000600286 ASPHD1Q5U4P2 390 aa13.06□□□□□ -0.32
USHBP1-210ENST00000600286 C10orf99Q6UWK7 81 aa13.06□□□□□ -0.32
USHBP1-210ENST00000600286 NDUFA11Q86Y39 141 aa13.06□□□□□ -0.32
USHBP1-210ENST00000600286 OR10W1Q8NGF6 305 aa13.06□□□□□ -0.32
USHBP1-210ENST00000600286 CITED2Q99967 270 aaPredicted RBP13.06□□□□□ -0.32
USHBP1-210ENST00000600286 HEYLQ9NQ87 328 aaPredicted RBP13.06□□□□□ -0.32
USHBP1-210ENST00000600286 TRRAPQ9Y4A5 3859 aa13.05□□□□□ -0.32
USHBP1-210ENST00000600286 IGLC7A0M8Q6 106 aa13.05□□□□□ -0.32
USHBP1-210ENST00000600286 DBX1A6NMT0 343 aa13.05□□□□□ -0.32
USHBP1-210ENST00000600286 FAM25EA8MYX2 175 aa13.05□□□□□ -0.32
USHBP1-210ENST00000600286 FAM90A26D6RGX4 464 aa13.05□□□□□ -0.32
USHBP1-210ENST00000600286 CRYGCP07315 174 aa13.05□□□□□ -0.32
USHBP1-210ENST00000600286 AREGP15514 252 aa13.05□□□□□ -0.32
USHBP1-210ENST00000600286 SPNP16150 400 aa13.05□□□□□ -0.32
USHBP1-210ENST00000600286 CTRB1P17538 263 aa13.05□□□□□ -0.32
USHBP1-210ENST00000600286 IAH1Q2TAA2 248 aaPredicted RBP13.05□□□□□ -0.32
USHBP1-210ENST00000600286 AARDQ4LEZ3 155 aa13.05□□□□□ -0.32
USHBP1-210ENST00000600286 CTRB2Q6GPI1 263 aa13.05□□□□□ -0.32
USHBP1-210ENST00000600286 NOXA1Q86UR1 476 aa13.05□□□□□ -0.32
USHBP1-210ENST00000600286 RNF152Q8N8N0 203 aa13.05□□□□□ -0.32
USHBP1-210ENST00000600286 USMG5Q96IX5 58 aa13.05□□□□□ -0.32
USHBP1-210ENST00000600286 CMYA5Q8N3K9 4069 aa13.04□□□□□ -0.32
USHBP1-210ENST00000600286 M0QZ24 198 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms