RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 UBQLN2Q9UHD9 624 aa15.69■□□□□ 0.1
PNKP-212ENST00000599454 TRAV3A0A0B4J244 114 aa15.68■□□□□ 0.1
PNKP-212ENST00000599454 OR4C46A6NHA9 309 aa15.68■□□□□ 0.1
PNKP-212ENST00000599454 NDUFA4O00483 81 aa15.68■□□□□ 0.1
PNKP-212ENST00000599454 ODF3L2Q3SX64 289 aa15.68■□□□□ 0.1
PNKP-212ENST00000599454 SFXN4Q6P4A7 337 aa15.68■□□□□ 0.1
PNKP-212ENST00000599454 GALNT14Q96FL9 552 aa15.68■□□□□ 0.1
PNKP-212ENST00000599454 CNBD2Q96M20 576 aa15.68■□□□□ 0.1
PNKP-212ENST00000599454 COMMD9Q9P000 198 aa15.68■□□□□ 0.1
PNKP-212ENST00000599454 RRP15Q9Y3B9 282 aaKnown RBP15.68■□□□□ 0.1
PNKP-212ENST00000599454 A0A0A6YYH2 397 aa15.67■□□□□ 0.1
PNKP-212ENST00000599454 A6NJ64 397 aa15.67■□□□□ 0.1
PNKP-212ENST00000599454 TRAPPC2P0DI81 140 aa15.67■□□□□ 0.1
PNKP-212ENST00000599454 TRAPPC2BP0DI82 140 aa15.67■□□□□ 0.1
PNKP-212ENST00000599454 GABARAPL2P60520 117 aa15.67■□□□□ 0.1
PNKP-212ENST00000599454 UBE2UQ5VVX9 321 aa15.67■□□□□ 0.1
PNKP-212ENST00000599454 DMBX1Q8NFW5 382 aa15.67■□□□□ 0.1
PNKP-212ENST00000599454 BORCS5Q969J3 196 aa15.67■□□□□ 0.1
PNKP-212ENST00000599454 FRAS1Q86XX4 4008 aa15.66■□□□□ 0.1
PNKP-212ENST00000599454 OR2T8A6NH00 312 aa15.66■□□□□ 0.1
PNKP-212ENST00000599454 K7EMT4 169 aa15.66■□□□□ 0.1
PNKP-212ENST00000599454 SERPINE2P07093 398 aa15.66■□□□□ 0.1
PNKP-212ENST00000599454 OR13C7P0DN81 318 aa15.66■□□□□ 0.1
PNKP-212ENST00000599454 SLC25A24Q6NUK1 477 aa15.66■□□□□ 0.1
PNKP-212ENST00000599454 ZNF773Q6PK81 442 aa15.66■□□□□ 0.1
PNKP-212ENST00000599454 OR10W1Q8NGF6 305 aa15.66■□□□□ 0.1
PNKP-212ENST00000599454 C6orf62Q9GZU0 229 aaPredicted RBP15.66■□□□□ 0.1
PNKP-212ENST00000599454 ETV7Q9Y603 341 aa15.66■□□□□ 0.1
PNKP-212ENST00000599454 TRAV18A0A075B6X5 111 aa15.65■□□□□ 0.1
PNKP-212ENST00000599454 ANKRD65E5RJM6 399 aa15.65■□□□□ 0.1
PNKP-212ENST00000599454 PTHLHP12272 177 aa15.65■□□□□ 0.1
PNKP-212ENST00000599454 ERVK-16P61578 105 aa15.65■□□□□ 0.1
PNKP-212ENST00000599454 GVQW1Q8N7I0 195 aa15.65■□□□□ 0.1
PNKP-212ENST00000599454 OR1L8Q8NGR8 309 aa15.65■□□□□ 0.1
PNKP-212ENST00000599454 OR51H1Q8NH63 302 aa15.65■□□□□ 0.1
PNKP-212ENST00000599454 GIMAP1Q8WWP7 306 aa15.65■□□□□ 0.1
PNKP-212ENST00000599454 MAP6D1Q9H9H5 199 aa15.65■□□□□ 0.1
PNKP-212ENST00000599454 C21orf62Q9NYP8 219 aa15.65■□□□□ 0.1
PNKP-212ENST00000599454 SSR3Q9UNL2 185 aa15.65■□□□□ 0.1
PNKP-212ENST00000599454 S1PR2O95136 353 aa15.64■□□□□ 0.09
PNKP-212ENST00000599454 RPA2P15927 270 aa15.64■□□□□ 0.09
PNKP-212ENST00000599454 CMC4P56277 68 aaPredicted RBP15.64■□□□□ 0.09
PNKP-212ENST00000599454 FXYD4P59646 89 aa15.64■□□□□ 0.09
PNKP-212ENST00000599454 KMT2AQ03164 3969 aa15.64■□□□□ 0.09
PNKP-212ENST00000599454 WT1-ASQ06250 92 aa15.64■□□□□ 0.09
PNKP-212ENST00000599454 AADACL3Q5VUY0 350 aa15.64■□□□□ 0.09
PNKP-212ENST00000599454 IZUMO2Q6UXV1 221 aa15.64■□□□□ 0.09
PNKP-212ENST00000599454 ZNF818PQ6ZRF7 136 aa15.64■□□□□ 0.09
PNKP-212ENST00000599454 PHLDA1Q8WV24 401 aaPredicted RBP15.64■□□□□ 0.09
PNKP-212ENST00000599454 FCGR1BQ92637 280 aa15.64■□□□□ 0.09
PNKP-212ENST00000599454 LSM10Q969L4 123 aaKnown RBP15.64■□□□□ 0.09
PNKP-212ENST00000599454 C20orf24Q9BUV8 137 aa15.64■□□□□ 0.09
PNKP-212ENST00000599454 F11RQ9Y624 299 aaKnown RBP15.64■□□□□ 0.09
PNKP-212ENST00000599454 TEX50A0A1B0GTY4 177 aa15.63■□□□□ 0.09
PNKP-212ENST00000599454 C15orf62A8K5M9 175 aa15.63■□□□□ 0.09
PNKP-212ENST00000599454 RPL35AP18077 110 aaKnown RBP15.63■□□□□ 0.09
PNKP-212ENST00000599454 PSMB9P28065 219 aa15.63■□□□□ 0.09
PNKP-212ENST00000599454 CBX5P45973 191 aa15.63■□□□□ 0.09
PNKP-212ENST00000599454 LGALS9CQ6DKI2 356 aa15.63■□□□□ 0.09
PNKP-212ENST00000599454 CADM3Q8N126 398 aa15.63■□□□□ 0.09
PNKP-212ENST00000599454 OR5AP2Q8NGF4 316 aa15.63■□□□□ 0.09
PNKP-212ENST00000599454 NDUFA4L2Q9NRX3 87 aa15.63■□□□□ 0.09
PNKP-212ENST00000599454 MARCH11A6NNE9 402 aa15.62■□□□□ 0.09
PNKP-212ENST00000599454 CTSDP07339 412 aaPredicted RBP15.62■□□□□ 0.09
PNKP-212ENST00000599454 HERV-K104P61576 105 aa15.62■□□□□ 0.09
PNKP-212ENST00000599454 RPP25LQ8N5L8 163 aaKnown RBP15.62■□□□□ 0.09
PNKP-212ENST00000599454 SCARB1Q8WTV0 552 aa15.62■□□□□ 0.09
PNKP-212ENST00000599454 GATAD1Q8WUU5 269 aa15.62■□□□□ 0.09
PNKP-212ENST00000599454 SLC25A38Q96DW6 304 aa15.62■□□□□ 0.09
PNKP-212ENST00000599454 CHRDL1Q9BU40 450 aa15.62■□□□□ 0.09
PNKP-212ENST00000599454 AUNIPQ9H7T9 357 aa15.62■□□□□ 0.09
PNKP-212ENST00000599454 DIABLOQ9NR28 239 aa15.62■□□□□ 0.09
PNKP-212ENST00000599454 RAB26Q9ULW5 256 aa15.62■□□□□ 0.09
PNKP-212ENST00000599454 SDC2P34741 201 aa15.61■□□□□ 0.09
PNKP-212ENST00000599454 TMEM17Q86X19 198 aa15.61■□□□□ 0.09
PNKP-212ENST00000599454 OR5H6Q8NGV6 325 aa15.61■□□□□ 0.09
PNKP-212ENST00000599454 F2RP25116 425 aa15.6■□□□□ 0.09
PNKP-212ENST00000599454 GNRHRP30968 328 aa15.6■□□□□ 0.09
PNKP-212ENST00000599454 ADMP35318 185 aa15.6■□□□□ 0.09
PNKP-212ENST00000599454 MFAP2P55001 183 aa15.6■□□□□ 0.09
PNKP-212ENST00000599454 Q56UQ5 140 aa15.6■□□□□ 0.09
PNKP-212ENST00000599454 SPARTQ8N0X7 666 aa15.6■□□□□ 0.09
PNKP-212ENST00000599454 OR5B3Q8NH48 314 aa15.6■□□□□ 0.09
PNKP-212ENST00000599454 HINT2Q9BX68 163 aa15.6■□□□□ 0.09
PNKP-212ENST00000599454 KRTAP17-1Q9BYP8 105 aa15.6■□□□□ 0.09
PNKP-212ENST00000599454 MFFQ9GZY8 342 aa15.6■□□□□ 0.09
PNKP-212ENST00000599454 CSTL1Q9H114 145 aa15.6■□□□□ 0.09
PNKP-212ENST00000599454 SMPXQ9UHP9 88 aa15.6■□□□□ 0.09
PNKP-212ENST00000599454 MPTX1A8MV57 137 aa15.59■□□□□ 0.09
PNKP-212ENST00000599454 F8W735 103 aaPredicted RBP15.59■□□□□ 0.09
PNKP-212ENST00000599454 K7EIM0 57 aa15.59■□□□□ 0.09
PNKP-212ENST00000599454 SNAPC5O75971 98 aa15.59■□□□□ 0.09
PNKP-212ENST00000599454 FCGR2BP31994 310 aaPredicted RBP15.59■□□□□ 0.09
PNKP-212ENST00000599454 RELQ04864 619 aaPredicted RBP15.59■□□□□ 0.09
PNKP-212ENST00000599454 UBAC2Q8NBM4 344 aa15.59■□□□□ 0.09
PNKP-212ENST00000599454 TMEM56Q96MV1 263 aa15.59■□□□□ 0.09
PNKP-212ENST00000599454 FKBP11Q9NYL4 201 aa15.59■□□□□ 0.09
PNKP-212ENST00000599454 OR51B2Q9Y5P1 312 aa15.59■□□□□ 0.09
PNKP-212ENST00000599454 IGHV3-21A0A0B4J1V1 117 aa15.58■□□□□ 0.08
PNKP-212ENST00000599454 ZNF207O43670 478 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms