RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 OR5T1Q8NG75 326 aa11.23□□□□□ -0.61
VRK3-213ENST00000597215 COQ8AQ8NI60 647 aa11.23□□□□□ -0.61
VRK3-213ENST00000597215 FAM110DQ8TAY7 271 aaPredicted RBP11.23□□□□□ -0.61
VRK3-213ENST00000597215 ZFP57Q9NU63 452 aa11.23□□□□□ -0.61
VRK3-213ENST00000597215 ZNF257Q9Y2Q1 563 aa11.23□□□□□ -0.61
VRK3-213ENST00000597215 TSSC4Q9Y5U2 329 aaPredicted RBP11.23□□□□□ -0.61
VRK3-213ENST00000597215 A0A0B4J293 547 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 A0A1B0GW64 132 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 CGB1A6NKQ9 187 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 DBX1A6NMT0 343 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 H3BUA1 57 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 SOX15O60248 233 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 DUS4LO95620 317 aaKnown RBP11.22□□□□□ -0.61
VRK3-213ENST00000597215 PLET1Q6UQ28 207 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 LYZL2Q7Z4W2 148 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 HSD17B13Q7Z5P4 300 aaPredicted RBP11.22□□□□□ -0.61
VRK3-213ENST00000597215 MRPL41Q8IXM3 137 aaKnown RBP11.22□□□□□ -0.61
VRK3-213ENST00000597215 TTC9CQ8N5M4 171 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 GPR146Q96CH1 333 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 PDCD10Q9BUL8 212 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 HINT2Q9BX68 163 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 NDUFA4L2Q9NRX3 87 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 ZNF355PQ9NSJ1 428 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 COA4Q9NYJ1 87 aa11.22□□□□□ -0.61
VRK3-213ENST00000597215 NPIPB5A8MRT5 1133 aa11.21□□□□□ -0.61
VRK3-213ENST00000597215 RPLP1P05386 114 aaKnown RBP11.21□□□□□ -0.61
VRK3-213ENST00000597215 RAB9AP51151 201 aa11.21□□□□□ -0.61
VRK3-213ENST00000597215 HSPE1P61604 102 aaKnown RBP11.21□□□□□ -0.61
VRK3-213ENST00000597215 RPL23AP62750 156 aaKnown RBP11.21□□□□□ -0.61
VRK3-213ENST00000597215 C2orf68Q2NKX9 166 aa11.21□□□□□ -0.61
VRK3-213ENST00000597215 NSUN5P1Q3KNT7 163 aa11.21□□□□□ -0.61
VRK3-213ENST00000597215 NMSQ5H8A3 153 aa11.21□□□□□ -0.61
VRK3-213ENST00000597215 HIST2H2BDQ6DRA6 164 aa11.21□□□□□ -0.61
VRK3-213ENST00000597215 LCNL1Q6ZST4 164 aa11.21□□□□□ -0.61
VRK3-213ENST00000597215 KLK15Q9H2R5 256 aa11.21□□□□□ -0.61
VRK3-213ENST00000597215 SLA2Q9H6Q3 261 aa11.21□□□□□ -0.61
VRK3-213ENST00000597215 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.21□□□□□ -0.61
VRK3-213ENST00000597215 CACNG5Q9UF02 275 aa11.21□□□□□ -0.61
VRK3-213ENST00000597215 TMED3Q9Y3Q3 217 aa11.21□□□□□ -0.61
VRK3-213ENST00000597215 A0A1W2PRX2 142 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 IGLC7A0M8Q6 106 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 ST8SIA3O43173 380 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 BRI3O95415 125 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 PTTG1O95997 202 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 DHFRP00374 187 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 IFNA17P01571 189 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 SULT1A3P0DMM9 295 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 SULT1A4P0DMN0 295 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 AREGP15514 252 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 PSMB6P28072 239 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 PRCDQ00LT1 54 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 DCTN2Q13561 401 aaKnown RBP11.2□□□□□ -0.62
VRK3-213ENST00000597215 SMCO1Q147U7 214 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 AARDQ4LEZ3 155 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 Q6ZRM9 215 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 OR10W1Q8NGF6 305 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 OR52B4Q8NGK2 314 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 MYOZ3Q8TDC0 251 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 MITD1Q8WV92 249 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 CACFD1Q9UGQ2 172 aa11.2□□□□□ -0.62
VRK3-213ENST00000597215 A0A1B0GU03 582 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 ADARB2-AS1A8MUL3 147 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 NUDT19A8MXV4 375 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 M0QZ24 198 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 TRGV3P03979 118 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 IL5P05113 134 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 CRYGCP07315 174 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 HOXB5P09067 269 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 OR13C7P0DN81 318 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 SLC25A6P12236 298 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 CTRB1P17538 263 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 TPPP2P59282 170 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 CTRB2Q6GPI1 263 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 KLHL30-AS1Q8NEE0 82 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 ZNF431Q8TF32 576 aaPredicted RBP11.19□□□□□ -0.62
VRK3-213ENST00000597215 MS4A10Q96PG2 267 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 SEC22CQ9BRL7 303 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 MARVELD1Q9BSK0 173 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 PLEKHA3Q9HB20 300 aa11.19□□□□□ -0.62
VRK3-213ENST00000597215 INMT-MINDY4F8WBC2 141 aa11.18□□□□□ -0.62
VRK3-213ENST00000597215 PRAF2O60831 178 aa11.18□□□□□ -0.62
VRK3-213ENST00000597215 IFNA21P01568 189 aa11.18□□□□□ -0.62
VRK3-213ENST00000597215 REG1AP05451 166 aa11.18□□□□□ -0.62
VRK3-213ENST00000597215 DEFA4P12838 97 aa11.18□□□□□ -0.62
VRK3-213ENST00000597215 CDX1P47902 265 aaPredicted RBP11.18□□□□□ -0.62
VRK3-213ENST00000597215 SPCS3P61009 180 aa11.18□□□□□ -0.62
VRK3-213ENST00000597215 WT1-ASQ06250 92 aa11.18□□□□□ -0.62
VRK3-213ENST00000597215 GGNBP1Q5YKI7 109 aa11.18□□□□□ -0.62
VRK3-213ENST00000597215 ZNF491Q8N8L2 437 aa11.18□□□□□ -0.62
VRK3-213ENST00000597215 OR52E5Q8NH55 327 aa11.18□□□□□ -0.62
VRK3-213ENST00000597215 UBE2E2Q96LR5 201 aa11.18□□□□□ -0.62
VRK3-213ENST00000597215 GPN1Q9HCN4 374 aaPredicted RBP11.18□□□□□ -0.62
VRK3-213ENST00000597215 ENY2Q9NPA8 101 aa11.18□□□□□ -0.62
VRK3-213ENST00000597215 A0A0G2JLM5 398 aa11.17□□□□□ -0.62
VRK3-213ENST00000597215 CYB5BO43169 146 aa11.17□□□□□ -0.62
VRK3-213ENST00000597215 PRH1P02810 166 aa11.17□□□□□ -0.62
VRK3-213ENST00000597215 HIST1H1BP16401 226 aaKnown RBP11.17□□□□□ -0.62
VRK3-213ENST00000597215 HOXA1P49639 335 aaPredicted RBP11.17□□□□□ -0.62
VRK3-213ENST00000597215 ERHP84090 104 aaKnown RBP11.17□□□□□ -0.62
VRK3-213ENST00000597215 KIAA0141Q14154 515 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms