RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 RPL23AP62750 156 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 OR2F1Q13607 317 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 Q6YL49 198 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 IL17RELQ6ZVW7 336 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 KCNRGQ8N5I3 272 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 C22orf15Q8WYQ4 148 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 OR4C12Q96R67 309 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 CLCC1Q96S66 551 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 SLC25A33Q9BSK2 321 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 PSENENQ9NZ42 101 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 MOB4Q9Y3A3 225 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 IGSF23A1L1A6 192 aa11.7□□□□□ -0.54
SHKBP1-211ENST00000595945 OPN1MWP04001 364 aa11.7□□□□□ -0.54
SHKBP1-211ENST00000595945 OPN1MW2P0DN77 364 aa11.7□□□□□ -0.54
SHKBP1-211ENST00000595945 OPN1MW3P0DN78 364 aa11.7□□□□□ -0.54
SHKBP1-211ENST00000595945 PLGLAQ15195 96 aa11.7□□□□□ -0.54
SHKBP1-211ENST00000595945 TNXAQ16473 311 aa11.7□□□□□ -0.54
SHKBP1-211ENST00000595945 TMEM14EPQ6UXP3 125 aa11.7□□□□□ -0.54
SHKBP1-211ENST00000595945 TMEM219Q86XT9 240 aa11.7□□□□□ -0.54
SHKBP1-211ENST00000595945 TMEM252Q8N6L7 170 aa11.7□□□□□ -0.54
SHKBP1-211ENST00000595945 C5orf56Q8N8D9 126 aa11.7□□□□□ -0.54
SHKBP1-211ENST00000595945 INO80EQ8NBZ0 244 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-211ENST00000595945 OR5R1Q8NH85 324 aa11.7□□□□□ -0.54
SHKBP1-211ENST00000595945 SMR3AQ99954 134 aa11.7□□□□□ -0.54
SHKBP1-211ENST00000595945 SVEP1Q4LDE5 3571 aa11.7□□□□□ -0.54
SHKBP1-211ENST00000595945 A0A0D9SG52 128 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 A0A1W2PN81 502 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 TEX22C9J3V5 150 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 IGHV4-59P01825 116 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 AMY1AP04745 511 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 CD99P14209 185 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 CHRNA7P36544 502 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 NUP62P37198 522 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 HOXA1P49639 335 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 LY6EQ16553 131 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 BSXQ3C1V8 233 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 ZNF562Q6V9R5 426 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 TMUB2Q71RG4 321 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 C16orf82Q7Z2V1 217 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 SRSF12Q8WXF0 261 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 BSCL2Q96G97 398 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 SLC25A31Q9H0C2 315 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 PLEKHA3Q9HB20 300 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 PITPNC1Q9UKF7 332 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 BOLA1Q9Y3E2 137 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 HSPB11Q9Y547 144 aa11.69□□□□□ -0.54
SHKBP1-211ENST00000595945 IGHV7-81A0A0B4J1V7 117 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 IGLC7A0M8Q6 106 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 C15orf62A8K5M9 175 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 CYSRT1A8MQ03 144 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 H3BP45 60 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 ACTL6BO94805 426 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 HNF1AP20823 631 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 SRP14P37108 136 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 CAV2P51636 162 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 CX3CL1P78423 397 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 NDPQ00604 133 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 EWSR1Q01844 656 aaKnown RBP eCLIP11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 WT1-ASQ06250 92 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 STPG2Q8N412 459 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 OR10W1Q8NGF6 305 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 TMEM170AQ8WVE7 144 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 RASL11BQ9BPW5 248 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 SRSF8Q9BRL6 282 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 HINT2Q9BX68 163 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 HIPK2Q9H2X6 1198 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 ENY2Q9NPA8 101 aa11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 HEYLQ9NQ87 328 aaPredicted RBP11.68□□□□□ -0.54
SHKBP1-211ENST00000595945 FN1P02751 2386 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-211ENST00000595945 PMS2P5A8MQ11 134 aa11.67□□□□□ -0.54
SHKBP1-211ENST00000595945 S100A11P31949 105 aa11.67□□□□□ -0.54
SHKBP1-211ENST00000595945 SULT1A1P50225 295 aa11.67□□□□□ -0.54
SHKBP1-211ENST00000595945 GNB1P62873 340 aa11.67□□□□□ -0.54
SHKBP1-211ENST00000595945 BAXQ07812 192 aa11.67□□□□□ -0.54
SHKBP1-211ENST00000595945 FXYD3Q14802 87 aa11.67□□□□□ -0.54
SHKBP1-211ENST00000595945 SPANXN5Q5MJ07 72 aa11.67□□□□□ -0.54
SHKBP1-211ENST00000595945 HAPLN4Q86UW8 402 aa11.67□□□□□ -0.54
SHKBP1-211ENST00000595945 SSMEM1Q8WWF3 244 aa11.67□□□□□ -0.54
SHKBP1-211ENST00000595945 ARL6Q9H0F7 186 aa11.67□□□□□ -0.54
SHKBP1-211ENST00000595945 STRAPQ9Y3F4 350 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-211ENST00000595945 U3KQ87 197 aa11.67□□□□□ -0.54
SHKBP1-211ENST00000595945 MAST4O15021 2626 aa11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 M0QZK8 103 aa11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 BCL2L11O43521 198 aa11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 RNASE2P10153 161 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 EGR2P11161 476 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 AP2S1P53680 142 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 ATP5IP56385 69 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 NHLH2Q02577 135 aa11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 ARL16Q0P5N6 197 aa11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 TMEM267Q0VDI3 215 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 OPCMLQ14982 345 aa11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 PVRIGQ6DKI7 326 aa11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 HSD17B13Q7Z5P4 300 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 SIGLECL1Q8N7X8 197 aa11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 ARPC1AQ92747 370 aa11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 HSPB9Q9BQS6 159 aa11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 CYTL1Q9NRR1 136 aa11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 VPREB3Q9UKI3 123 aa11.66□□□□□ -0.54
SHKBP1-211ENST00000595945 PRSS46E5RG02 174 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms