RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 GGTLC1Q9BX51 225 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 MIXL1Q9H2W2 232 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 SLC2A9Q9NRM0 540 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 COMMD9Q9P000 198 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 S4R3C0 116 aa11.06□□□□□ -0.64
PNKP-202ENST00000593706 KMT2AQ03164 3969 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 TRAV3A0A0B4J244 114 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 SMIM31A0A1B0GVY4 71 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 CXorf65A6NEN9 183 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 HPRT1P00492 218 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 RLN1P04808 185 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 CRYGCP07315 174 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 AREGP15514 252 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 OR2B8PP59922 312 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 PMS2P11Q13670 270 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 FAM106AQ4KMX7 169 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 AADACL3Q5VUY0 350 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 CLEC19AQ6UXS0 136 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 GPR141Q7Z602 305 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 GPHB5Q86YW7 130 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 BORCS5Q969J3 196 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 EEF1AKMT3Q96AZ1 226 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 CCDC140Q96MF4 163 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 FANCD2OSQ96PS1 177 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 DMRT1Q9Y5R6 373 aa11.05□□□□□ -0.64
PNKP-202ENST00000593706 LOC102724200A0A096LPH7 203 aaPredicted RBP11.04□□□□□ -0.64
PNKP-202ENST00000593706 IGLC7A0M8Q6 106 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 TMEM213A2RRL7 107 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 A8MWP6 167 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 UPK2O00526 184 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 SCAF4O95104 1147 aaKnown RBP11.04□□□□□ -0.64
PNKP-202ENST00000593706 LY6G6CO95867 125 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 NQO2P16083 231 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 ANKRD55Q3KP44 614 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 ZNF585BQ52M93 769 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 MZT2AQ6P582 158 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 BTNL8Q6UX41 500 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 CADM3Q8N126 398 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 OR6F1Q8NGZ6 308 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 ABHD1Q96SE0 405 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 AIFM2Q9BRQ8 373 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 TMEM140Q9NV12 185 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 MLXQ9UH92 298 aa11.04□□□□□ -0.64
PNKP-202ENST00000593706 GPR31O00270 319 aa11.03□□□□□ -0.64
PNKP-202ENST00000593706 NDUFB8O95169 186 aa11.03□□□□□ -0.64
PNKP-202ENST00000593706 DEFA4P12838 97 aa11.03□□□□□ -0.64
PNKP-202ENST00000593706 CTRB1P17538 263 aa11.03□□□□□ -0.64
PNKP-202ENST00000593706 F2RP25116 425 aa11.03□□□□□ -0.64
PNKP-202ENST00000593706 PSMB6P28072 239 aa11.03□□□□□ -0.64
PNKP-202ENST00000593706 CTRB2Q6GPI1 263 aa11.03□□□□□ -0.64
PNKP-202ENST00000593706 UXS1Q8NBZ7 420 aa11.03□□□□□ -0.64
PNKP-202ENST00000593706 OR52I2Q8NH67 350 aa11.03□□□□□ -0.64
PNKP-202ENST00000593706 FCAMRQ8WWV6 532 aa11.03□□□□□ -0.64
PNKP-202ENST00000593706 DGCR14Q96DF8 476 aaKnown RBP11.03□□□□□ -0.64
PNKP-202ENST00000593706 OVOL2Q9BRP0 275 aa11.03□□□□□ -0.64
PNKP-202ENST00000593706 EXTL2Q9UBQ6 330 aa11.03□□□□□ -0.64
PNKP-202ENST00000593706 KLK11Q9UBX7 282 aa11.03□□□□□ -0.64
PNKP-202ENST00000593706 NUPR2A6NF83 97 aa11.02□□□□□ -0.65
PNKP-202ENST00000593706 MARCH11A6NNE9 402 aa11.02□□□□□ -0.65
PNKP-202ENST00000593706 M0QYG6 137 aa11.02□□□□□ -0.65
PNKP-202ENST00000593706 REG1AP05451 166 aa11.02□□□□□ -0.65
PNKP-202ENST00000593706 HIST1H1BP16401 226 aaKnown RBP11.02□□□□□ -0.65
PNKP-202ENST00000593706 UCP3P55916 312 aa11.02□□□□□ -0.65
PNKP-202ENST00000593706 RBPMS2Q6ZRY4 209 aaKnown RBP11.02□□□□□ -0.65
PNKP-202ENST00000593706 LHFPL1Q86WI0 220 aa11.02□□□□□ -0.65
PNKP-202ENST00000593706 CMTM1Q8IZ96 169 aa11.02□□□□□ -0.65
PNKP-202ENST00000593706 DYNC2LI1Q8TCX1 351 aa11.02□□□□□ -0.65
PNKP-202ENST00000593706 RAB2BQ8WUD1 216 aa11.02□□□□□ -0.65
PNKP-202ENST00000593706 BCL7BQ9BQE9 202 aa11.02□□□□□ -0.65
PNKP-202ENST00000593706 SRSF8Q9BRL6 282 aaKnown RBP11.02□□□□□ -0.65
PNKP-202ENST00000593706 HRASLSQ9HDD0 168 aa11.02□□□□□ -0.65
PNKP-202ENST00000593706 FAM212BQ9NTI7 297 aaPredicted RBP11.02□□□□□ -0.65
PNKP-202ENST00000593706 MTFP1Q9UDX5 166 aa11.02□□□□□ -0.65
PNKP-202ENST00000593706 IGLV11-55A0A075B6I3 123 aa11.01□□□□□ -0.65
PNKP-202ENST00000593706 MFSD2BA6NFX1 497 aa11.01□□□□□ -0.65
PNKP-202ENST00000593706 FAM25AB3EWG3 89 aa11.01□□□□□ -0.65
PNKP-202ENST00000593706 FAM25CB3EWG5 89 aa11.01□□□□□ -0.65
PNKP-202ENST00000593706 FAM25GB3EWG6 89 aa11.01□□□□□ -0.65
PNKP-202ENST00000593706 CTDSP2O14595 271 aa11.01□□□□□ -0.65
PNKP-202ENST00000593706 TBPP20226 339 aa11.01□□□□□ -0.65
PNKP-202ENST00000593706 TMBIM6P55061 237 aa11.01□□□□□ -0.65
PNKP-202ENST00000593706 PHLDA2Q53GA4 152 aa11.01□□□□□ -0.65
PNKP-202ENST00000593706 TM4SF20Q53R12 229 aa11.01□□□□□ -0.65
PNKP-202ENST00000593706 CLVS1Q8IUQ0 354 aaPredicted RBP11.01□□□□□ -0.65
PNKP-202ENST00000593706 OR1L6Q8NGR2 347 aa11.01□□□□□ -0.65
PNKP-202ENST00000593706 CXorf58Q96LI9 332 aa11.01□□□□□ -0.65
PNKP-202ENST00000593706 CCDC59Q9P031 241 aaKnown RBP11.01□□□□□ -0.65
PNKP-202ENST00000593706 TRBV7-1A0A0A6YYK4 115 aa11□□□□□ -0.65
PNKP-202ENST00000593706 A0A0J9YWU9 116 aa11□□□□□ -0.65
PNKP-202ENST00000593706 IGKV1-39P01597 117 aa11□□□□□ -0.65
PNKP-202ENST00000593706 CD74P04233 296 aa11□□□□□ -0.65
PNKP-202ENST00000593706 CD3DP04234 171 aa11□□□□□ -0.65
PNKP-202ENST00000593706 IGKV1D-39P04432 117 aa11□□□□□ -0.65
PNKP-202ENST00000593706 GPR183P32249 361 aa11□□□□□ -0.65
PNKP-202ENST00000593706 LPAR6P43657 344 aa11□□□□□ -0.65
PNKP-202ENST00000593706 APOC4P55056 127 aa11□□□□□ -0.65
PNKP-202ENST00000593706 RNASE12Q5GAN4 147 aaKnown RBP11□□□□□ -0.65
PNKP-202ENST00000593706 SLC38A6Q8IZM9 456 aa11□□□□□ -0.65
PNKP-202ENST00000593706 DMBX1Q8NFW5 382 aa11□□□□□ -0.65
PNKP-202ENST00000593706 OR4D10Q8NGI6 311 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms