RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 IGHG2P01859 326 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 VDAC1P21796 283 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 VDAC2P45880 294 aaPredicted RBP7.56□□□□□ -1.2
DDX39A-220ENST00000593008 H2BFSP57053 126 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 SRPXP78539 464 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 WT1-ASQ06250 92 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 C19orf54Q5BKX5 351 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 ZNF329Q86UD4 541 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 MMD2Q8IY49 270 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 Q8N2B8 174 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 LFNGQ8NES3 379 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 OR4A16Q8NH70 328 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 FAM110DQ8TAY7 271 aaPredicted RBP7.56□□□□□ -1.2
DDX39A-220ENST00000593008 LSM10Q969L4 123 aaKnown RBP7.56□□□□□ -1.2
DDX39A-220ENST00000593008 TMEM14BQ9NUH8 114 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 FOXA2Q9Y261 457 aaPredicted RBP7.56□□□□□ -1.2
DDX39A-220ENST00000593008 DMRT1Q9Y5R6 373 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 MEGF8Q7Z7M0 2845 aa7.56□□□□□ -1.2
DDX39A-220ENST00000593008 IGLC7A0M8Q6 106 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 PITX3O75364 302 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 SCGB1D2O95969 90 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 SULT1A3P0DMM9 295 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 SULT1A4P0DMN0 295 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 CD28P10747 220 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 IAPPP10997 89 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 RPL27AP46776 148 aaKnown RBP7.55□□□□□ -1.2
DDX39A-220ENST00000593008 CFHR3Q02985 330 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 SMCO1Q147U7 214 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 IAH1Q2TAA2 248 aaPredicted RBP7.55□□□□□ -1.2
DDX39A-220ENST00000593008 FOXRED2Q8IWF2 684 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 ZBTB8BQ8NAP8 495 aaPredicted RBP7.55□□□□□ -1.2
DDX39A-220ENST00000593008 OR4D5Q8NGN0 318 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 OR5M8Q8NGP6 311 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 OR1S1Q8NH92 325 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 VSTM2AQ8TAG5 236 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 CHAC2Q8WUX2 184 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 GPN1Q9HCN4 374 aaPredicted RBP7.55□□□□□ -1.2
DDX39A-220ENST00000593008 GSKIPQ9P0R6 139 aa7.55□□□□□ -1.2
DDX39A-220ENST00000593008 TRAV41A0A0B4J266 112 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 C5orf51A6NDU8 294 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 SMLR1H3BR10 107 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 KCNAB3O43448 404 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 SNAPC5O75971 98 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 MFAP2P55001 183 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 POLR2GP62487 172 aaKnown RBP eCLIP7.54□□□□□ -1.2
DDX39A-220ENST00000593008 NSUN5P1Q3KNT7 163 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 ZNF562Q6V9R5 426 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 C18orf65Q6ZTR6 163 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 CADM3Q8N126 398 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 STPG2Q8N412 459 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 MINDY2Q8NBR6 621 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 OR5T1Q8NG75 326 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 OR4A5Q8NH83 315 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 TMEM170AQ8WVE7 144 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 COMMD5Q9GZQ3 224 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 RBKSQ9H477 322 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 NDUFA4L2Q9NRX3 87 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 CACFD1Q9UGQ2 172 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 PRNDQ9UKY0 176 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 RCL1Q9Y2P8 373 aaKnown RBP7.54□□□□□ -1.2
DDX39A-220ENST00000593008 TMED3Q9Y3Q3 217 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 WNK1Q9H4A3 2382 aa7.54□□□□□ -1.2
DDX39A-220ENST00000593008 IGHV3-21A0A0B4J1V1 117 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 A0A1W2PN81 502 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 DUXBA0A1W2PPF3 345 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 H3BP45 60 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 FBXO24O75426 580 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 ACTL6BO94805 426 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 TMEM50AO95807 157 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 IFNA17P01571 189 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 MBPP02686 304 aaPredicted RBP7.53□□□□□ -1.2
DDX39A-220ENST00000593008 CHRNA7P36544 502 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 HOXA1P49639 335 aaPredicted RBP7.53□□□□□ -1.2
DDX39A-220ENST00000593008 PRCDQ00LT1 54 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 CD300CQ08708 224 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 TMEM267Q0VDI3 215 aaPredicted RBP7.53□□□□□ -1.2
DDX39A-220ENST00000593008 LRRC37A5PQ49AS3 106 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 AARDQ4LEZ3 155 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 Q5BKY6 102 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 TCTEX1D4Q5JR98 221 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 THOC7Q6I9Y2 204 aaKnown RBP7.53□□□□□ -1.2
DDX39A-220ENST00000593008 UNQ5815/PRO19632Q6UWF5 114 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 MS4A10Q96PG2 267 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 CITED2Q99967 270 aaPredicted RBP7.53□□□□□ -1.2
DDX39A-220ENST00000593008 WNT10AQ9GZT5 417 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 MED28Q9H204 178 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 KLK15Q9H2R5 256 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 HSPB7Q9UBY9 170 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 S4R3C0 116 aa7.53□□□□□ -1.2
DDX39A-220ENST00000593008 A0A1B0GU03 582 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 A0A1W2PRX2 142 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 CEBPZOSA8MTT3 80 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 H0YIZ8 118 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 AP4M1O00189 453 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 SSSCA1O60232 199 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 CCNKO75909 580 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 IFNA21P01568 189 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 IGF1P05019 195 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 TRAPPC2P0DI81 140 aa7.52□□□□□ -1.21
DDX39A-220ENST00000593008 TRAPPC2BP0DI82 140 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms