RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 DBX1A6NMT0 343 aa14.96□□□□□ -0.01
DDX39A-214ENST00000590556 RPLP1P05386 114 aaKnown RBP14.96□□□□□ -0.01
DDX39A-214ENST00000590556 THOC7Q6I9Y2 204 aaKnown RBP14.96□□□□□ -0.01
DDX39A-214ENST00000590556 LCNL1Q6ZST4 164 aa14.96□□□□□ -0.01
DDX39A-214ENST00000590556 RNF152Q8N8N0 203 aa14.96□□□□□ -0.01
DDX39A-214ENST00000590556 FAM110DQ8TAY7 271 aaPredicted RBP14.96□□□□□ -0.01
DDX39A-214ENST00000590556 PALMDQ9NP74 551 aa14.96□□□□□ -0.01
DDX39A-214ENST00000590556 ZNF355PQ9NSJ1 428 aa14.96□□□□□ -0.01
DDX39A-214ENST00000590556 COA4Q9NYJ1 87 aa14.96□□□□□ -0.01
DDX39A-214ENST00000590556 TSSC4Q9Y5U2 329 aaPredicted RBP14.96□□□□□ -0.01
DDX39A-214ENST00000590556 DUXBA0A1W2PPF3 345 aa14.95□□□□□ -0.02
DDX39A-214ENST00000590556 DUS4LO95620 317 aaKnown RBP14.95□□□□□ -0.02
DDX39A-214ENST00000590556 NSUN5P1Q3KNT7 163 aa14.95□□□□□ -0.02
DDX39A-214ENST00000590556 PLET1Q6UQ28 207 aa14.95□□□□□ -0.02
DDX39A-214ENST00000590556 Q6ZRM9 215 aa14.95□□□□□ -0.02
DDX39A-214ENST00000590556 ZNF429Q86V71 674 aa14.95□□□□□ -0.02
DDX39A-214ENST00000590556 NDUFA11Q86Y39 141 aa14.95□□□□□ -0.02
DDX39A-214ENST00000590556 TTC9CQ8N5M4 171 aa14.95□□□□□ -0.02
DDX39A-214ENST00000590556 COQ8AQ8NI60 647 aa14.95□□□□□ -0.02
DDX39A-214ENST00000590556 MS4A10Q96PG2 267 aa14.95□□□□□ -0.02
DDX39A-214ENST00000590556 SRSF8Q9BRL6 282 aaKnown RBP14.95□□□□□ -0.02
DDX39A-214ENST00000590556 KLK15Q9H2R5 256 aa14.95□□□□□ -0.02
DDX39A-214ENST00000590556 NDUFA4L2Q9NRX3 87 aa14.95□□□□□ -0.02
DDX39A-214ENST00000590556 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.95□□□□□ -0.02
DDX39A-214ENST00000590556 ZFP57Q9NU63 452 aa14.95□□□□□ -0.02
DDX39A-214ENST00000590556 CACNG5Q9UF02 275 aa14.95□□□□□ -0.02
DDX39A-214ENST00000590556 ZNF257Q9Y2Q1 563 aa14.95□□□□□ -0.02
DDX39A-214ENST00000590556 A0A1W2PRX2 142 aa14.94□□□□□ -0.02
DDX39A-214ENST00000590556 H3BUA1 57 aa14.94□□□□□ -0.02
DDX39A-214ENST00000590556 AREGP15514 252 aa14.94□□□□□ -0.02
DDX39A-214ENST00000590556 RAB9AP51151 201 aa14.94□□□□□ -0.02
DDX39A-214ENST00000590556 MECP2P51608 486 aaKnown RBP14.94□□□□□ -0.02
DDX39A-214ENST00000590556 HSPE1P61604 102 aaKnown RBP14.94□□□□□ -0.02
DDX39A-214ENST00000590556 NMSQ5H8A3 153 aa14.94□□□□□ -0.02
DDX39A-214ENST00000590556 OR10W1Q8NGF6 305 aa14.94□□□□□ -0.02
DDX39A-214ENST00000590556 OR52B4Q8NGK2 314 aa14.94□□□□□ -0.02
DDX39A-214ENST00000590556 PDCD10Q9BUL8 212 aa14.94□□□□□ -0.02
DDX39A-214ENST00000590556 IGLC7A0M8Q6 106 aa14.93□□□□□ -0.02
DDX39A-214ENST00000590556 NPIPB5A8MRT5 1133 aa14.93□□□□□ -0.02
DDX39A-214ENST00000590556 ST8SIA3O43173 380 aa14.93□□□□□ -0.02
DDX39A-214ENST00000590556 IFNA17P01571 189 aa14.93□□□□□ -0.02
DDX39A-214ENST00000590556 SULT1A3P0DMM9 295 aa14.93□□□□□ -0.02
DDX39A-214ENST00000590556 SULT1A4P0DMN0 295 aa14.93□□□□□ -0.02
DDX39A-214ENST00000590556 PSMB6P28072 239 aa14.93□□□□□ -0.02
DDX39A-214ENST00000590556 RPL23AP62750 156 aaKnown RBP14.93□□□□□ -0.02
DDX39A-214ENST00000590556 HSD17B13Q7Z5P4 300 aaPredicted RBP14.93□□□□□ -0.02
DDX39A-214ENST00000590556 SEC22CQ9BRL7 303 aa14.93□□□□□ -0.02
DDX39A-214ENST00000590556 SLA2Q9H6Q3 261 aa14.93□□□□□ -0.02
DDX39A-214ENST00000590556 ADARB2-AS1A8MUL3 147 aa14.92□□□□□ -0.02
DDX39A-214ENST00000590556 M0QZ24 198 aa14.92□□□□□ -0.02
DDX39A-214ENST00000590556 TRGV3P03979 118 aa14.92□□□□□ -0.02
DDX39A-214ENST00000590556 REG1AP05451 166 aa14.92□□□□□ -0.02
DDX39A-214ENST00000590556 HOXB5P09067 269 aa14.92□□□□□ -0.02
DDX39A-214ENST00000590556 OR13C7P0DN81 318 aa14.92□□□□□ -0.02
DDX39A-214ENST00000590556 TPPP2P59282 170 aa14.92□□□□□ -0.02
DDX39A-214ENST00000590556 PRCDQ00LT1 54 aa14.92□□□□□ -0.02
DDX39A-214ENST00000590556 DCTN2Q13561 401 aaKnown RBP14.92□□□□□ -0.02
DDX39A-214ENST00000590556 MRPL41Q8IXM3 137 aaKnown RBP14.92□□□□□ -0.02
DDX39A-214ENST00000590556 ZNF431Q8TF32 576 aaPredicted RBP14.92□□□□□ -0.02
DDX39A-214ENST00000590556 MITD1Q8WV92 249 aa14.92□□□□□ -0.02
DDX39A-214ENST00000590556 TMED3Q9Y3Q3 217 aa14.92□□□□□ -0.02
DDX39A-214ENST00000590556 A0A1B0GU03 582 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 NUDT19A8MXV4 375 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 INMT-MINDY4F8WBC2 141 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 BRI3O95415 125 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 DHFRP00374 187 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 IL5P05113 134 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 CRYGCP07315 174 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 WT1-ASQ06250 92 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 SMCO1Q147U7 214 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 C2orf68Q2NKX9 166 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 SPINK9Q5DT21 86 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 ZNF491Q8N8L2 437 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 MYOZ3Q8TDC0 251 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 MARVELD1Q9BSK0 173 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 PLEKHA3Q9HB20 300 aa14.91□□□□□ -0.02
DDX39A-214ENST00000590556 PTTG1O95997 202 aa14.9□□□□□ -0.02
DDX39A-214ENST00000590556 PRH1P02810 166 aa14.9□□□□□ -0.02
DDX39A-214ENST00000590556 DEFA4P12838 97 aa14.9□□□□□ -0.02
DDX39A-214ENST00000590556 SPNP16150 400 aa14.9□□□□□ -0.02
DDX39A-214ENST00000590556 CTRB1P17538 263 aa14.9□□□□□ -0.02
DDX39A-214ENST00000590556 CDX1P47902 265 aaPredicted RBP14.9□□□□□ -0.02
DDX39A-214ENST00000590556 KIAA0141Q14154 515 aaPredicted RBP14.9□□□□□ -0.02
DDX39A-214ENST00000590556 AARDQ4LEZ3 155 aa14.9□□□□□ -0.02
DDX39A-214ENST00000590556 GGNBP1Q5YKI7 109 aa14.9□□□□□ -0.02
DDX39A-214ENST00000590556 CTRB2Q6GPI1 263 aa14.9□□□□□ -0.02
DDX39A-214ENST00000590556 C19orf35Q6ZS72 473 aa14.9□□□□□ -0.02
DDX39A-214ENST00000590556 OR52E5Q8NH55 327 aa14.9□□□□□ -0.02
DDX39A-214ENST00000590556 UBE2E2Q96LR5 201 aa14.9□□□□□ -0.02
DDX39A-214ENST00000590556 CACFD1Q9UGQ2 172 aa14.9□□□□□ -0.02
DDX39A-214ENST00000590556 ADAP1O75689 374 aa14.89□□□□□ -0.03
DDX39A-214ENST00000590556 IFNA21P01568 189 aa14.89□□□□□ -0.03
DDX39A-214ENST00000590556 SPCS3P61009 180 aa14.89□□□□□ -0.03
DDX39A-214ENST00000590556 C18orf65Q6ZTR6 163 aa14.89□□□□□ -0.03
DDX39A-214ENST00000590556 KLHL30-AS1Q8NEE0 82 aa14.89□□□□□ -0.03
DDX39A-214ENST00000590556 OR1S1Q8NH92 325 aa14.89□□□□□ -0.03
DDX39A-214ENST00000590556 GPN1Q9HCN4 374 aaPredicted RBP14.89□□□□□ -0.03
DDX39A-214ENST00000590556 ENY2Q9NPA8 101 aa14.89□□□□□ -0.03
DDX39A-214ENST00000590556 A0A0G2JLM5 398 aa14.88□□□□□ -0.03
DDX39A-214ENST00000590556 PRAF2O60831 178 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms