RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 TMEM88Q6PEY1 159 aa6.64□□□□□ -1.35
TREM1-204ENST00000589614 SPARTQ8N0X7 666 aa6.64□□□□□ -1.35
TREM1-204ENST00000589614 TMEM167AQ8TBQ9 72 aa6.64□□□□□ -1.35
TREM1-204ENST00000589614 LGALS12Q96DT0 336 aa6.64□□□□□ -1.35
TREM1-204ENST00000589614 OR10C1Q96KK4 312 aa6.64□□□□□ -1.35
TREM1-204ENST00000589614 C1QTNF4Q9BXJ3 329 aa6.64□□□□□ -1.35
TREM1-204ENST00000589614 Q9N2K0 584 aa6.64□□□□□ -1.35
TREM1-204ENST00000589614 CLEC5AQ9NY25 188 aa6.64□□□□□ -1.35
TREM1-204ENST00000589614 IGHV3OR16-8A0A075B7F1 116 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 SNTNA6NMZ2 147 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 REG1AP05451 166 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 UBBP0CG47 229 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 SRMP19623 302 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 HTR2CP28335 458 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 POLR2IP36954 125 aaKnown RBP6.63□□□□□ -1.35
TREM1-204ENST00000589614 SSX1Q16384 188 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 TTC32Q5I0X7 151 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 PUSL1Q8N0Z8 303 aaKnown RBP6.63□□□□□ -1.35
TREM1-204ENST00000589614 OR6M1Q8NGM8 313 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 DGCR14Q96DF8 476 aaKnown RBP6.63□□□□□ -1.35
TREM1-204ENST00000589614 ZNF414Q96IQ9 312 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 UQCC2Q9BRT2 126 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 NIPSNAP3BQ9BS92 247 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 TM2D1Q9BX74 207 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 GABARAPL3Q9BY60 117 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 GABARAPL1Q9H0R8 117 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 MS4A6AQ9H2W1 248 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 PLEKHJ1Q9NW61 149 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 DKK2Q9UBU2 259 aa6.63□□□□□ -1.35
TREM1-204ENST00000589614 TRBV5-5A0A0J9YX44 114 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 NPIPB6E9PJ23 425 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 G3V2T6 193 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 DNASE2O00115 360 aaPredicted RBP6.62□□□□□ -1.35
TREM1-204ENST00000589614 CYB5BO43169 146 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 DIRAS3O95661 229 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 CELP19835 753 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 ICAM4Q14773 271 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 ATP6AP1Q15904 470 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 Q499Y3 187 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 OR2G6Q5TZ20 316 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 XAF1Q6GPH4 301 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 TCF24Q7RTU0 167 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 FAM24BQ8N5W8 94 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 NKAIN3Q8N8D7 197 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 OR4A4PQ8NGN8 299 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 CCDC124Q96CT7 223 aaKnown RBP6.62□□□□□ -1.35
TREM1-204ENST00000589614 CIB1Q99828 191 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 SRSF8Q9BRL6 282 aaKnown RBP6.62□□□□□ -1.35
TREM1-204ENST00000589614 HDHD3Q9BSH5 251 aaPredicted RBP6.62□□□□□ -1.35
TREM1-204ENST00000589614 TMEM59Q9BXS4 323 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 C12orf4Q9NQ89 552 aa6.62□□□□□ -1.35
TREM1-204ENST00000589614 DNAH8Q96JB1 4490 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 TRBV6-7A0A0A0MS04 114 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 TRAV14DV4A0A0A6YYC5 116 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 SMIM9A6NGZ8 99 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 CGB1A6NKQ9 187 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 TRDCB7Z8K6 153 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 FCGR3BO75015 233 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 CCL18P55774 89 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 RPL8P62917 257 aaKnown RBP6.61□□□□□ -1.35
TREM1-204ENST00000589614 PLA2G7Q13093 441 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 ZNF705AQ6ZN79 300 aaPredicted RBP6.61□□□□□ -1.35
TREM1-204ENST00000589614 VKORC1L1Q8N0U8 176 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 DUSP18Q8NEJ0 188 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 OR10J5Q8NHC4 309 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 SMIM19Q96E16 107 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 GRAMD2BQ96HH9 432 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 DCUN1D5Q9BTE7 237 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 AK3Q9UIJ7 227 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 MRPS7Q9Y2R9 242 aaKnown RBP6.61□□□□□ -1.35
TREM1-204ENST00000589614 PRELID3BQ9Y3B1 194 aa6.61□□□□□ -1.35
TREM1-204ENST00000589614 A0A1W2PPQ1 181 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 IGLC7A0M8Q6 106 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 MARCH11A6NNE9 402 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 ZNF705FA8MVS1 300 aaPredicted RBP6.6□□□□□ -1.35
TREM1-204ENST00000589614 DIRC3C9JPN6 131 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 OGG1O15527 345 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 CTSGP08311 255 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 ZNF705DP0CH99 300 aaPredicted RBP6.6□□□□□ -1.35
TREM1-204ENST00000589614 ZNF705BP0CI00 300 aaPredicted RBP6.6□□□□□ -1.35
TREM1-204ENST00000589614 HTN3P15516 51 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 GNB3P16520 340 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 FGF9P31371 208 aaPredicted RBP6.6□□□□□ -1.35
TREM1-204ENST00000589614 NUTF2P61970 127 aaKnown RBP6.6□□□□□ -1.35
TREM1-204ENST00000589614 RELQ04864 619 aaPredicted RBP6.6□□□□□ -1.35
TREM1-204ENST00000589614 YIF1BQ5BJH7 314 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 FAM222AQ5U5X8 452 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 UBE2UQ5VVX9 321 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 C16orf54Q6UWD8 224 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 SLC29A1Q99808 456 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 CABLES2Q9BTV7 478 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 KRTAP1-5Q9BYS1 174 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 Q9H3A6 140 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 VSIRQ9H7M9 311 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 C21orf62Q9NYP8 219 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 HSF4Q9ULV5 492 aa6.6□□□□□ -1.35
TREM1-204ENST00000589614 RBM7Q9Y580 266 aaKnown RBP6.6□□□□□ -1.35
TREM1-204ENST00000589614 PUS1Q9Y606 427 aaKnown RBP eCLIP6.6□□□□□ -1.35
TREM1-204ENST00000589614 IGHV3-49A0A0A0MS15 119 aa6.59□□□□□ -1.35
TREM1-204ENST00000589614 TCRBV3S1A0A5B6 114 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms