RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 A0A0B4J2A0 478 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 SRRM4A7MD48 611 aaKnown RBP8.96□□□□□ -0.98
RFX1-204ENST00000588885 SEC14L6B5MCN3 397 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 I3L521 148 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 FCGR3BO75015 233 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 ADAP1O75689 374 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 IGKV1-39P01597 117 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 IGLV2-23P01705 113 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 IGHV3-11P01762 117 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 IGKV1D-39P04432 117 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 SULT1A3P0DMM9 295 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 SULT1A4P0DMN0 295 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 CD69Q07108 199 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 TMEM267Q0VDI3 215 aaPredicted RBP8.96□□□□□ -0.98
RFX1-204ENST00000588885 ZNF585BQ52M93 769 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 C19orf54Q5BKX5 351 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 TMEM268Q5VZI3 342 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 ZNF562Q6V9R5 426 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 SPAG16Q8N0X2 631 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 OR11H7Q8NGC8 314 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 GLYATL2Q8WU03 294 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 ADTRPQ96IZ2 230 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 HARBI1Q96MB7 349 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 ZNF355PQ9NSJ1 428 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 SHPKQ9UHJ6 478 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 KCNIP3Q9Y2W7 256 aa8.96□□□□□ -0.98
RFX1-204ENST00000588885 HMX3A6NHT5 357 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 DBX1A6NMT0 343 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 SHOXO15266 292 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 B3GALNT1O75752 331 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 SIX6O95475 246 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 HOXB5P09067 269 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 TRAPPC2P0DI81 140 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 TRAPPC2BP0DI82 140 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 APELAP0DMC3 54 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 CXCL3P19876 107 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 KIR2DS2P43631 304 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 LPAR6P43657 344 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 SRPXP78539 464 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 ZNF616Q08AN1 781 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 ASPHD1Q5U4P2 390 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 SELENOHQ8IZQ5 122 aaKnown RBP8.95□□□□□ -0.98
RFX1-204ENST00000588885 LGI3Q8N145 548 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 SLC35G3Q8N808 338 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 LRTM2Q8N967 370 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 OR4S2Q8NH73 311 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 CHAC2Q8WUX2 184 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 ARPC1AQ92747 370 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 TMEM56Q96MV1 263 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 TMEM56-RWDD3S4R434 201 aa8.95□□□□□ -0.98
RFX1-204ENST00000588885 A0A0G2JRQ6 117 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 SPDEFO95238 335 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 CRYZL1O95825 349 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 SERPINE2P07093 398 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 LGALS7P47929 136 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 CRIP2P52943 208 aaPredicted RBP8.94□□□□□ -0.98
RFX1-204ENST00000588885 SLURP1P55000 103 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 TPPP2P59282 170 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 FHL3Q13643 280 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 RTL8BQ17RB0 113 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 AKIRIN2Q53H80 203 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 C9orf66Q5T8R8 295 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 GGNBP1Q5YKI7 109 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 LYZL2Q7Z4W2 148 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 DCUN1D4Q92564 292 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 RBPMSQ93062 196 aaKnown RBP8.94□□□□□ -0.98
RFX1-204ENST00000588885 IL22RA2Q969J5 263 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 PRR25Q96S07 402 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 ZMAT5Q9UDW3 170 aaKnown RBP8.94□□□□□ -0.98
RFX1-204ENST00000588885 PRELID3BQ9Y3B1 194 aa8.94□□□□□ -0.98
RFX1-204ENST00000588885 IGHV4OR15-8A0A075B7B6 117 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 A0A087WW49 117 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 MPTX1A8MV57 137 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 FAM25EA8MYX2 175 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 RBFOX2O43251 390 aaKnown RBP eCLIP8.93□□□□□ -0.98
RFX1-204ENST00000588885 CDS2O95674 445 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 IGKV1-5P01602 117 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 TRGV3P03979 118 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 CRYGBP07316 175 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 OR8U8P0C7N1 319 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 RPA2P15927 270 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 AKR1C2P52895 323 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 SSBP2P81877 361 aaPredicted RBP8.93□□□□□ -0.98
RFX1-204ENST00000588885 RUNX1Q01196 453 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 DEFA5Q01523 94 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 TAGLNQ01995 201 aaKnown RBP8.93□□□□□ -0.98
RFX1-204ENST00000588885 CD300CQ08708 224 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 TMEM177Q53S58 311 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 AKAP14Q86UN6 197 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 TCTEX1D1Q8N7M0 179 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 DLX4Q92988 240 aaPredicted RBP8.93□□□□□ -0.98
RFX1-204ENST00000588885 WDR89Q96FK6 387 aaPredicted RBP8.93□□□□□ -0.98
RFX1-204ENST00000588885 FAM212BQ9NTI7 297 aaPredicted RBP8.93□□□□□ -0.98
RFX1-204ENST00000588885 COMMD9Q9P000 198 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 COL7A1Q02388 2944 aa8.93□□□□□ -0.98
RFX1-204ENST00000588885 DUXBA0A1W2PPF3 345 aa8.92□□□□□ -0.98
RFX1-204ENST00000588885 ANKRD34BA5PLL1 514 aa8.92□□□□□ -0.98
RFX1-204ENST00000588885 LINC01619G3V211 115 aa8.92□□□□□ -0.98
RFX1-204ENST00000588885 HPRT1P00492 218 aa8.92□□□□□ -0.98
RFX1-204ENST00000588885 LGALS1P09382 135 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms