RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 IFNA10P01566 189 aa15.81■□□□□ 0.12
CAPNS1-205ENST00000588780 HLA-DQB1P01920 261 aa15.81■□□□□ 0.12
CAPNS1-205ENST00000588780 IRF3Q14653 427 aa15.81■□□□□ 0.12
CAPNS1-205ENST00000588780 TIMM50Q3ZCQ8 353 aa15.81■□□□□ 0.12
CAPNS1-205ENST00000588780 UBE2DNLQ8IWF7 75 aa15.81■□□□□ 0.12
CAPNS1-205ENST00000588780 MAPKAPK5-AS1Q8N8E1 139 aa15.81■□□□□ 0.12
CAPNS1-205ENST00000588780 GPHA2Q96T91 129 aa15.81■□□□□ 0.12
CAPNS1-205ENST00000588780 NDUFAF3Q9BU61 184 aa15.81■□□□□ 0.12
CAPNS1-205ENST00000588780 BET1LQ9NYM9 111 aa15.81■□□□□ 0.12
CAPNS1-205ENST00000588780 IGHV3OR16-13A0A075B7E8 117 aa15.8■□□□□ 0.12
CAPNS1-205ENST00000588780 IGHV3-74A0A0B4J1X5 117 aa15.8■□□□□ 0.12
CAPNS1-205ENST00000588780 IGHV7-4-1A0A0J9YVY3 117 aa15.8■□□□□ 0.12
CAPNS1-205ENST00000588780 MFNGO00587 321 aa15.8■□□□□ 0.12
CAPNS1-205ENST00000588780 HIST1H1DP16402 221 aaKnown RBP15.8■□□□□ 0.12
CAPNS1-205ENST00000588780 LGALS9BQ3B8N2 356 aa15.8■□□□□ 0.12
CAPNS1-205ENST00000588780 STHQ8IWL8 128 aa15.8■□□□□ 0.12
CAPNS1-205ENST00000588780 OR10W1Q8NGF6 305 aa15.8■□□□□ 0.12
CAPNS1-205ENST00000588780 IGKV1D-13A0A0B4J2D9 117 aa15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 DNASE2O00115 360 aaPredicted RBP15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 ARL6IP5O75915 188 aa15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 IGLV2-14P01704 120 aa15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 CTXN2P0C2S0 81 aa15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 OR13C7P0DN81 318 aa15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 IGKV1-13P0DP09 117 aa15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 MIFP14174 115 aa15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 DEFB131AP59861 70 aa15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 LIPKQ5VXJ0 399 aa15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 ZNF767PQ75MW2 155 aa15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 GDPD1Q8N9F7 314 aa15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 GIMAP1Q8WWP7 306 aa15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 QTRT1Q9BXR0 403 aaKnown RBP15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 S100A14Q9HCY8 104 aa15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 V9GY05 133 aa15.79■□□□□ 0.12
CAPNS1-205ENST00000588780 TNFSF12O43508 249 aa15.78■□□□□ 0.12
CAPNS1-205ENST00000588780 AMBPP02760 352 aa15.78■□□□□ 0.12
CAPNS1-205ENST00000588780 BRWD1-AS2P59051 145 aa15.78■□□□□ 0.12
CAPNS1-205ENST00000588780 RPL11P62913 178 aaKnown RBP15.78■□□□□ 0.12
CAPNS1-205ENST00000588780 SPHARQ15513 63 aa15.78■□□□□ 0.12
CAPNS1-205ENST00000588780 ZNF66Q6ZN08 573 aa15.78■□□□□ 0.12
CAPNS1-205ENST00000588780 Q6ZS49 121 aa15.78■□□□□ 0.12
CAPNS1-205ENST00000588780 DHRSXQ8N5I4 330 aa15.78■□□□□ 0.12
CAPNS1-205ENST00000588780 UFD1Q92890 307 aa15.78■□□□□ 0.12
CAPNS1-205ENST00000588780 SRSF8Q9BRL6 282 aaKnown RBP15.78■□□□□ 0.12
CAPNS1-205ENST00000588780 HINT2Q9BX68 163 aa15.78■□□□□ 0.12
CAPNS1-205ENST00000588780 TRAV3A0A0B4J244 114 aa15.77■□□□□ 0.12
CAPNS1-205ENST00000588780 IFNA21P01568 189 aa15.77■□□□□ 0.12
CAPNS1-205ENST00000588780 IFNA17P01571 189 aa15.77■□□□□ 0.12
CAPNS1-205ENST00000588780 EIF4EP06730 217 aaKnown RBP15.77■□□□□ 0.12
CAPNS1-205ENST00000588780 CALRP27797 417 aaKnown RBP15.77■□□□□ 0.12
CAPNS1-205ENST00000588780 RELQ04864 619 aaPredicted RBP15.77■□□□□ 0.12
CAPNS1-205ENST00000588780 TCF24Q7RTU0 167 aa15.77■□□□□ 0.12
CAPNS1-205ENST00000588780 SPAG16Q8N0X2 631 aa15.77■□□□□ 0.12
CAPNS1-205ENST00000588780 SCARB1Q8WTV0 552 aa15.77■□□□□ 0.12
CAPNS1-205ENST00000588780 UPK2O00526 184 aa15.76■□□□□ 0.11
CAPNS1-205ENST00000588780 C8orf59Q8N0T1 100 aaPredicted RBP15.76■□□□□ 0.11
CAPNS1-205ENST00000588780 DMBX1Q8NFW5 382 aa15.76■□□□□ 0.11
CAPNS1-205ENST00000588780 ELOA3CA0A087WX78 387 aaPredicted RBP15.75■□□□□ 0.11
CAPNS1-205ENST00000588780 TRAV14DV4A0A0A6YYC5 116 aa15.75■□□□□ 0.11
CAPNS1-205ENST00000588780 METTL21EPA6NDL7 271 aa15.75■□□□□ 0.11
CAPNS1-205ENST00000588780 C16orf90A8MZG2 172 aa15.75■□□□□ 0.11
CAPNS1-205ENST00000588780 NUPL2O15504 423 aaKnown RBP15.75■□□□□ 0.11
CAPNS1-205ENST00000588780 SERPINE2P07093 398 aa15.75■□□□□ 0.11
CAPNS1-205ENST00000588780 TRAPPC2P0DI81 140 aa15.75■□□□□ 0.11
CAPNS1-205ENST00000588780 TRAPPC2BP0DI82 140 aa15.75■□□□□ 0.11
CAPNS1-205ENST00000588780 DTYMKP23919 212 aa15.75■□□□□ 0.11
CAPNS1-205ENST00000588780 ELF5Q9UKW6 265 aaPredicted RBP15.75■□□□□ 0.11
CAPNS1-205ENST00000588780 HSMCR30P0CW71 290 aa15.74■□□□□ 0.11
CAPNS1-205ENST00000588780 RPS25P62851 125 aaKnown RBP15.74■□□□□ 0.11
CAPNS1-205ENST00000588780 EIF4EBP1Q13541 118 aaPredicted RBP15.74■□□□□ 0.11
CAPNS1-205ENST00000588780 TMEM91Q6ZNR0 172 aa15.74■□□□□ 0.11
CAPNS1-205ENST00000588780 SECTM1Q8WVN6 248 aa15.74■□□□□ 0.11
CAPNS1-205ENST00000588780 ATP6V0BQ99437 205 aa15.74■□□□□ 0.11
CAPNS1-205ENST00000588780 PLCXD1Q9NUJ7 323 aa15.74■□□□□ 0.11
CAPNS1-205ENST00000588780 PKD1P98161 4303 aa15.74■□□□□ 0.11
CAPNS1-205ENST00000588780 PTGES3LE9PB15 166 aa15.73■□□□□ 0.11
CAPNS1-205ENST00000588780 ST8SIA3O43173 380 aa15.73■□□□□ 0.11
CAPNS1-205ENST00000588780 DFFBO76075 338 aa15.73■□□□□ 0.11
CAPNS1-205ENST00000588780 NQO2P16083 231 aa15.73■□□□□ 0.11
CAPNS1-205ENST00000588780 TAS2R31P59538 309 aa15.73■□□□□ 0.11
CAPNS1-205ENST00000588780 TMEM41BQ5BJD5 291 aa15.73■□□□□ 0.11
CAPNS1-205ENST00000588780 THOC7Q6I9Y2 204 aaKnown RBP15.73■□□□□ 0.11
CAPNS1-205ENST00000588780 LAIR2Q6ISS4 152 aa15.73■□□□□ 0.11
CAPNS1-205ENST00000588780 HSD17B13Q7Z5P4 300 aaPredicted RBP15.73■□□□□ 0.11
CAPNS1-205ENST00000588780 ATG5Q9H1Y0 275 aa15.73■□□□□ 0.11
CAPNS1-205ENST00000588780 TMEM140Q9NV12 185 aa15.73■□□□□ 0.11
CAPNS1-205ENST00000588780 RABAC1Q9UI14 185 aa15.73■□□□□ 0.11
CAPNS1-205ENST00000588780 CELA1Q9UNI1 258 aa15.73■□□□□ 0.11
CAPNS1-205ENST00000588780 SULT1C2O00338 296 aa15.72■□□□□ 0.11
CAPNS1-205ENST00000588780 CTSGP08311 255 aa15.72■□□□□ 0.11
CAPNS1-205ENST00000588780 NPY1RP25929 384 aa15.72■□□□□ 0.11
CAPNS1-205ENST00000588780 WT1-ASQ06250 92 aa15.72■□□□□ 0.11
CAPNS1-205ENST00000588780 ARL6IP1Q15041 203 aa15.72■□□□□ 0.11
CAPNS1-205ENST00000588780 C12orf74Q32Q52 190 aa15.72■□□□□ 0.11
CAPNS1-205ENST00000588780 FAM90A2PQ658T7 463 aa15.72■□□□□ 0.11
CAPNS1-205ENST00000588780 CNIH2Q6PI25 160 aa15.72■□□□□ 0.11
CAPNS1-205ENST00000588780 MS4A6AQ9H2W1 248 aa15.72■□□□□ 0.11
CAPNS1-205ENST00000588780 CCL28Q9NRJ3 127 aa15.72■□□□□ 0.11
CAPNS1-205ENST00000588780 CLEC5AQ9NY25 188 aa15.72■□□□□ 0.11
CAPNS1-205ENST00000588780 TBC1D24Q9ULP9 559 aa15.72■□□□□ 0.11
CAPNS1-205ENST00000588780 F11RQ9Y624 299 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms