RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 TMEM127O75204 238 aa10.75□□□□□ -0.69
VMP1-206ENST00000587945 PGLYRP1O75594 196 aaPredicted RBP10.75□□□□□ -0.69
VMP1-206ENST00000587945 OR13C7P0DN81 318 aa10.75□□□□□ -0.69
VMP1-206ENST00000587945 LPAR6P43657 344 aa10.75□□□□□ -0.69
VMP1-206ENST00000587945 WT1-ASQ06250 92 aa10.75□□□□□ -0.69
VMP1-206ENST00000587945 ZNF585BQ52M93 769 aa10.75□□□□□ -0.69
VMP1-206ENST00000587945 TMEM69Q5SWH9 247 aa10.75□□□□□ -0.69
VMP1-206ENST00000587945 HINT2Q9BX68 163 aa10.75□□□□□ -0.69
VMP1-206ENST00000587945 FXYD6Q9H0Q3 95 aa10.75□□□□□ -0.69
VMP1-206ENST00000587945 COMMD9Q9P000 198 aa10.75□□□□□ -0.69
VMP1-206ENST00000587945 PLECQ15149 4684 aaKnown RBP10.75□□□□□ -0.69
VMP1-206ENST00000587945 KRASP01116 189 aa10.74□□□□□ -0.69
VMP1-206ENST00000587945 TRAPPC2P0DI81 140 aa10.74□□□□□ -0.69
VMP1-206ENST00000587945 TRAPPC2BP0DI82 140 aa10.74□□□□□ -0.69
VMP1-206ENST00000587945 F2RP25116 425 aa10.74□□□□□ -0.69
VMP1-206ENST00000587945 PTBP1P26599 531 aaKnown RBP eCLIP10.74□□□□□ -0.69
VMP1-206ENST00000587945 ERVK-16P61578 105 aa10.74□□□□□ -0.69
VMP1-206ENST00000587945 SLC25A24Q6NUK1 477 aa10.74□□□□□ -0.69
VMP1-206ENST00000587945 PLET1Q6UQ28 207 aa10.74□□□□□ -0.69
VMP1-206ENST00000587945 SLC16A13Q7RTY0 426 aa10.74□□□□□ -0.69
VMP1-206ENST00000587945 CROCCP3Q8IVE0 287 aa10.74□□□□□ -0.69
VMP1-206ENST00000587945 OR52B4Q8NGK2 314 aa10.74□□□□□ -0.69
VMP1-206ENST00000587945 OR5H2Q8NGV7 314 aa10.74□□□□□ -0.69
VMP1-206ENST00000587945 FCAMRQ8WWV6 532 aa10.74□□□□□ -0.69
VMP1-206ENST00000587945 SRSF8Q9BRL6 282 aaKnown RBP10.74□□□□□ -0.69
VMP1-206ENST00000587945 EPPK1P58107 5090 aaKnown RBP10.73□□□□□ -0.69
VMP1-206ENST00000587945 OR2T8A6NH00 312 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 MARCH11A6NNE9 402 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 TGOLN2O43493 480 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 EIF4EP06730 217 aaKnown RBP10.73□□□□□ -0.69
VMP1-206ENST00000587945 SERPINE2P07093 398 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 C8orf88P0DMB2 117 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 NAT1P18440 290 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 HLA-DMAP28067 261 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 PRSS3P35030 304 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 G6PCP35575 357 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 MFAP2P55001 183 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 LYSMD2Q8IV50 215 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 GDPD1Q8N9F7 314 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 OR1L8Q8NGR8 309 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 DGCR14Q96DF8 476 aaKnown RBP10.73□□□□□ -0.69
VMP1-206ENST00000587945 NDUFA4L2Q9NRX3 87 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 THYN1Q9P016 225 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 OR51B2Q9Y5P1 312 aa10.73□□□□□ -0.69
VMP1-206ENST00000587945 FGF2P09038 288 aa10.72□□□□□ -0.69
VMP1-206ENST00000587945 HRH1P35367 487 aa10.72□□□□□ -0.69
VMP1-206ENST00000587945 TAS2R46P59540 309 aa10.72□□□□□ -0.69
VMP1-206ENST00000587945 PHLDA2Q53GA4 152 aa10.72□□□□□ -0.69
VMP1-206ENST00000587945 TSPAN14Q8NG11 270 aa10.72□□□□□ -0.69
VMP1-206ENST00000587945 OR6F1Q8NGZ6 308 aa10.72□□□□□ -0.69
VMP1-206ENST00000587945 VN1R17PQ8TDU5 208 aa10.72□□□□□ -0.69
VMP1-206ENST00000587945 BORCS5Q969J3 196 aa10.72□□□□□ -0.69
VMP1-206ENST00000587945 ZNF436Q9C0F3 470 aaPredicted RBP10.72□□□□□ -0.69
VMP1-206ENST00000587945 COMMD3Q9UBI1 195 aa10.72□□□□□ -0.69
VMP1-206ENST00000587945 UFC1Q9Y3C8 167 aa10.72□□□□□ -0.69
VMP1-206ENST00000587945 HYDINQ4G0P3 5121 aa10.72□□□□□ -0.69
VMP1-206ENST00000587945 IGHV3OR16-8A0A075B7F1 116 aa10.71□□□□□ -0.69
VMP1-206ENST00000587945 A0A087WXM4 84 aa10.71□□□□□ -0.69
VMP1-206ENST00000587945 DBX1A6NMT0 343 aa10.71□□□□□ -0.69
VMP1-206ENST00000587945 GPR31O00270 319 aa10.71□□□□□ -0.69
VMP1-206ENST00000587945 SNAPC5O75971 98 aa10.71□□□□□ -0.69
VMP1-206ENST00000587945 NCS1P62166 190 aa10.71□□□□□ -0.69
VMP1-206ENST00000587945 THOC7Q6I9Y2 204 aaKnown RBP10.71□□□□□ -0.69
VMP1-206ENST00000587945 RBPMS2Q6ZRY4 209 aaKnown RBP10.71□□□□□ -0.69
VMP1-206ENST00000587945 CMTM1Q8IZ96 169 aa10.71□□□□□ -0.69
VMP1-206ENST00000587945 OR1L6Q8NGR2 347 aa10.71□□□□□ -0.69
VMP1-206ENST00000587945 GPX8Q8TED1 209 aa10.71□□□□□ -0.69
VMP1-206ENST00000587945 TMEM190Q8WZ59 177 aa10.71□□□□□ -0.69
VMP1-206ENST00000587945 MARC2Q969Z3 335 aa10.71□□□□□ -0.69
VMP1-206ENST00000587945 SLC25A46Q96AG3 418 aa10.71□□□□□ -0.69
VMP1-206ENST00000587945 CHRDL1Q9BU40 450 aa10.71□□□□□ -0.69
VMP1-206ENST00000587945 GGTLC1Q9BX51 225 aa10.71□□□□□ -0.69
VMP1-206ENST00000587945 MRPL27Q9P0M9 148 aaKnown RBP10.71□□□□□ -0.69
VMP1-206ENST00000587945 F11RQ9Y624 299 aaKnown RBP10.71□□□□□ -0.69
VMP1-206ENST00000587945 TRAV25A0A0B4J276 109 aa10.7□□□□□ -0.7
VMP1-206ENST00000587945 CYB5BO43169 146 aa10.7□□□□□ -0.7
VMP1-206ENST00000587945 ZNF207O43670 478 aaKnown RBP10.7□□□□□ -0.7
VMP1-206ENST00000587945 ELLP55199 621 aaPredicted RBP10.7□□□□□ -0.7
VMP1-206ENST00000587945 ANKRD55Q3KP44 614 aa10.7□□□□□ -0.7
VMP1-206ENST00000587945 HSD17B13Q7Z5P4 300 aaPredicted RBP10.7□□□□□ -0.7
VMP1-206ENST00000587945 SNX29P2Q8IUI4 249 aa10.7□□□□□ -0.7
VMP1-206ENST00000587945 UBAC2Q8NBM4 344 aa10.7□□□□□ -0.7
VMP1-206ENST00000587945 SCARB1Q8WTV0 552 aa10.7□□□□□ -0.7
VMP1-206ENST00000587945 LSM10Q969L4 123 aaKnown RBP10.7□□□□□ -0.7
VMP1-206ENST00000587945 VCX3AQ9NNX9 186 aa10.7□□□□□ -0.7
VMP1-206ENST00000587945 C21orf62Q9NYP8 219 aa10.7□□□□□ -0.7
VMP1-206ENST00000587945 LOC102724200A0A096LPH7 203 aaPredicted RBP10.69□□□□□ -0.7
VMP1-206ENST00000587945 F8W735 103 aaPredicted RBP10.69□□□□□ -0.7
VMP1-206ENST00000587945 K7EIM0 57 aa10.69□□□□□ -0.7
VMP1-206ENST00000587945 ADMP35318 185 aa10.69□□□□□ -0.7
VMP1-206ENST00000587945 VBP1P61758 197 aa10.69□□□□□ -0.7
VMP1-206ENST00000587945 TSPAN5P62079 268 aa10.69□□□□□ -0.7
VMP1-206ENST00000587945 BSCL2Q96G97 398 aaPredicted RBP10.69□□□□□ -0.7
VMP1-206ENST00000587945 OVOL2Q9BRP0 275 aa10.69□□□□□ -0.7
VMP1-206ENST00000587945 C20orf24Q9BUV8 137 aa10.69□□□□□ -0.7
VMP1-206ENST00000587945 C5orf66Q9H5L9 145 aa10.69□□□□□ -0.7
VMP1-206ENST00000587945 UBQLN2Q9UHD9 624 aa10.69□□□□□ -0.7
VMP1-206ENST00000587945 PRNDQ9UKY0 176 aa10.69□□□□□ -0.7
VMP1-206ENST00000587945 BIRC6Q9NR09 4857 aa10.68□□□□□ -0.7
VMP1-206ENST00000587945 HPGDSO60760 199 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms