RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 SRSF8Q9BRL6 282 aaKnown RBP13.64□□□□□ -0.23
NFIX-209ENST00000587760 SMDT1Q9H4I9 107 aa13.64□□□□□ -0.23
NFIX-209ENST00000587760 SIGLEC9Q9Y336 463 aa13.64□□□□□ -0.23
NFIX-209ENST00000587760 MYO18BQ8IUG5 2567 aa13.64□□□□□ -0.23
NFIX-209ENST00000587760 TRAV1-1A0A0B4J248 108 aa13.63□□□□□ -0.23
NFIX-209ENST00000587760 MOSP00540 346 aa13.63□□□□□ -0.23
NFIX-209ENST00000587760 COMPP49747 757 aaPredicted RBP13.63□□□□□ -0.23
NFIX-209ENST00000587760 KLRD1Q13241 179 aa13.63□□□□□ -0.23
NFIX-209ENST00000587760 PPP1R27Q86WC6 154 aa13.63□□□□□ -0.23
NFIX-209ENST00000587760 CCDC28AQ8IWP9 274 aa13.63□□□□□ -0.23
NFIX-209ENST00000587760 OR2T10Q8NGZ9 312 aa13.63□□□□□ -0.23
NFIX-209ENST00000587760 RBMXL1Q96E39 390 aaKnown RBP13.63□□□□□ -0.23
NFIX-209ENST00000587760 KIAA1456Q9P272 454 aa13.63□□□□□ -0.23
NFIX-209ENST00000587760 METTL1Q9UBP6 276 aaKnown RBP13.63□□□□□ -0.23
NFIX-209ENST00000587760 USP9XQ93008 2570 aaPredicted RBP13.63□□□□□ -0.23
NFIX-209ENST00000587760 RPL27AP46776 148 aaKnown RBP13.62□□□□□ -0.23
NFIX-209ENST00000587760 PEA15Q15121 130 aa13.62□□□□□ -0.23
NFIX-209ENST00000587760 RNASEH2CQ8TDP1 164 aaKnown RBP13.62□□□□□ -0.23
NFIX-209ENST00000587760 CACNG8Q8WXS5 425 aa13.62□□□□□ -0.23
NFIX-209ENST00000587760 CFHR4Q92496 578 aa13.62□□□□□ -0.23
NFIX-209ENST00000587760 NARS2Q96I59 477 aaKnown RBP13.62□□□□□ -0.23
NFIX-209ENST00000587760 NPCDR1Q9BY65 106 aa13.62□□□□□ -0.23
NFIX-209ENST00000587760 HILPDAQ9Y5L2 63 aa13.62□□□□□ -0.23
NFIX-209ENST00000587760 TET2Q6N021 2002 aaPredicted RBP13.62□□□□□ -0.23
NFIX-209ENST00000587760 A0A1B0GW64 132 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 A1L4Q6 167 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 SMCO3A2RU48 225 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 SNRNP70P08621 437 aaKnown RBP13.61□□□□□ -0.23
NFIX-209ENST00000587760 RNASE2P10153 161 aaKnown RBP13.61□□□□□ -0.23
NFIX-209ENST00000587760 GPX4P36969 197 aaPredicted RBP13.61□□□□□ -0.23
NFIX-209ENST00000587760 FHITP49789 147 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 PRB3Q04118 309 aaPredicted RBP13.61□□□□□ -0.23
NFIX-209ENST00000587760 PLGLAQ15195 96 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 TMEM170AQ8WVE7 144 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 PERPQ96FX8 193 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 TBX15Q96SF7 602 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 TREM1Q9NP99 234 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 IGHV4-61A0A0C4DH41 118 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 TMEM218A2RU14 115 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 NBR2O15453 112 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 OPN1MWP04001 364 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 OPN1MW2P0DN77 364 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 OPN1MW3P0DN78 364 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 BRS3P32247 399 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 PAX8Q06710 450 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 ACOT6Q3I5F7 207 aaPredicted RBP13.61□□□□□ -0.23
NFIX-209ENST00000587760 TEPPQ6URK8 271 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 NPBQ8NG41 125 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 MBD3L1Q8WWY6 194 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 RPRMQ9NS64 109 aa13.61□□□□□ -0.23
NFIX-209ENST00000587760 SPTAN1Q13813 2472 aaKnown RBP13.6□□□□□ -0.23
NFIX-209ENST00000587760 MYOD1P15172 320 aa13.6□□□□□ -0.23
NFIX-209ENST00000587760 OPRK1P41145 380 aa13.6□□□□□ -0.23
NFIX-209ENST00000587760 EBI3Q14213 229 aa13.6□□□□□ -0.23
NFIX-209ENST00000587760 MMDQ15546 238 aa13.6□□□□□ -0.23
NFIX-209ENST00000587760 SSX2Q16385 188 aa13.6□□□□□ -0.23
NFIX-209ENST00000587760 TNXAQ16473 311 aa13.6□□□□□ -0.23
NFIX-209ENST00000587760 TUSC1Q2TAM9 212 aa13.6□□□□□ -0.23
NFIX-209ENST00000587760 LDLRAD2Q5SZI1 272 aa13.6□□□□□ -0.23
NFIX-209ENST00000587760 TREML4Q6UXN2 200 aa13.6□□□□□ -0.23
NFIX-209ENST00000587760 LHFPL4Q7Z7J7 247 aa13.6□□□□□ -0.23
NFIX-209ENST00000587760 ZNF114Q8NC26 417 aa13.6□□□□□ -0.23
NFIX-209ENST00000587760 BPIFCQ8NFQ6 507 aa13.6□□□□□ -0.23
NFIX-209ENST00000587760 RITA1Q96K30 269 aa13.6□□□□□ -0.23
NFIX-209ENST00000587760 LINC00052Q96N35 136 aa13.6□□□□□ -0.23
NFIX-209ENST00000587760 BEX4Q9NWD9 120 aaPredicted RBP13.6□□□□□ -0.23
NFIX-209ENST00000587760 FAM157AC9JC47 383 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 CORTO00230 105 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 CYB5BO43169 146 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 NDUFA3O95167 84 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 IGKV1D-33P01593 117 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 IGKV1-33P01594 117 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 CD5P06127 495 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 GATA3P23771 443 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 AKR1C1Q04828 323 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 FFAR4Q5NUL3 377 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 ZNF787Q6DD87 383 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 ETFRF1Q6IPR1 90 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 OR10W1Q8NGF6 305 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 SFT2D1Q8WV19 159 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 ACTR3CQ9C0K3 210 aaPredicted RBP13.59□□□□□ -0.23
NFIX-209ENST00000587760 C1RLQ9NZP8 487 aa13.59□□□□□ -0.23
NFIX-209ENST00000587760 IGHV4-30-2A0A087WSY4 118 aa13.58□□□□□ -0.24
NFIX-209ENST00000587760 AGPAT2O15120 278 aa13.58□□□□□ -0.24
NFIX-209ENST00000587760 FAM106CPP0CH98 169 aa13.58□□□□□ -0.24
NFIX-209ENST00000587760 OR13C7P0DN81 318 aa13.58□□□□□ -0.24
NFIX-209ENST00000587760 M6PRP20645 277 aa13.58□□□□□ -0.24
NFIX-209ENST00000587760 CD69Q07108 199 aa13.58□□□□□ -0.24
NFIX-209ENST00000587760 HES1Q14469 280 aa13.58□□□□□ -0.24
NFIX-209ENST00000587760 GUK1Q16774 197 aa13.58□□□□□ -0.24
NFIX-209ENST00000587760 MRGPRG-AS1Q2M3A8 158 aa13.58□□□□□ -0.24
NFIX-209ENST00000587760 TMEM144Q7Z5S9 345 aa13.58□□□□□ -0.24
NFIX-209ENST00000587760 LRRC75A-AS1Q8N1F1 130 aa13.58□□□□□ -0.24
NFIX-209ENST00000587760 EAF1Q96JC9 268 aaPredicted RBP13.58□□□□□ -0.24
NFIX-209ENST00000587760 SLC35E1Q96K37 410 aa13.58□□□□□ -0.24
NFIX-209ENST00000587760 TPSG1Q9NRR2 321 aa13.58□□□□□ -0.24
NFIX-209ENST00000587760 LSM4Q9Y4Z0 139 aaKnown RBP13.58□□□□□ -0.24
NFIX-209ENST00000587760 RFNGQ9Y644 331 aa13.58□□□□□ -0.24
NFIX-209ENST00000587760 CTXND1A0A1B0GTU2 59 aa13.57□□□□□ -0.24
NFIX-209ENST00000587760 CGB1A6NKQ9 187 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms