RNA–Protein interactions for RNA: ENST00000586457.1

CLIP3-203, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 1 (best)

Gene CLIP3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-203ENST00000586457 SLC25A24Q6NUK1 477 aa8.38□□□□□ -1.07
CLIP3-203ENST00000586457 ACSM6Q6P461 480 aa8.38□□□□□ -1.07
CLIP3-203ENST00000586457 OR9G4Q8NGQ1 327 aa8.38□□□□□ -1.07
CLIP3-203ENST00000586457 OR1L6Q8NGR2 347 aa8.38□□□□□ -1.07
CLIP3-203ENST00000586457 SMIM4Q8WVI0 70 aa8.38□□□□□ -1.07
CLIP3-203ENST00000586457 RRNAD1Q96FB5 475 aaKnown RBP8.38□□□□□ -1.07
CLIP3-203ENST00000586457 PRR25Q96S07 402 aa8.38□□□□□ -1.07
CLIP3-203ENST00000586457 PRRT1Q99946 306 aa8.38□□□□□ -1.07
CLIP3-203ENST00000586457 SCP2D1Q9UJQ7 156 aa8.38□□□□□ -1.07
CLIP3-203ENST00000586457 CEPT1Q9Y6K0 416 aa8.38□□□□□ -1.07
CLIP3-203ENST00000586457 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.37□□□□□ -1.07
CLIP3-203ENST00000586457 TRBV7-1A0A0A6YYK4 115 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 TRBV9A0A0B4J1U6 114 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 ZNF320A2RRD8 509 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 K7EIL1 84 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 GGCTO75223 188 aaKnown RBP8.37□□□□□ -1.07
CLIP3-203ENST00000586457 B3GALNT1O75752 331 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 CRYGCP07315 174 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 MYOD1P15172 320 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 ARL3P36405 182 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 AP3S2P59780 193 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 KLF5Q13887 457 aaPredicted RBP8.37□□□□□ -1.07
CLIP3-203ENST00000586457 FAM106AQ4KMX7 169 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 ZNF585BQ52M93 769 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 OR5B3Q8NH48 314 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 MARCH1Q8TCQ1 289 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 LSM10Q969L4 123 aaKnown RBP8.37□□□□□ -1.07
CLIP3-203ENST00000586457 THAP7Q9BT49 309 aaPredicted RBP8.37□□□□□ -1.07
CLIP3-203ENST00000586457 SLIRPQ9GZT3 109 aaKnown RBP8.37□□□□□ -1.07
CLIP3-203ENST00000586457 KCNIP3Q9Y2W7 256 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 NSG2Q9Y328 171 aa8.37□□□□□ -1.07
CLIP3-203ENST00000586457 E7EUB6 86 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 H0Y980 276 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 NDUFB8O95169 186 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 IFNA17P01571 189 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 IGHV3-23P01764 117 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 CD74P04233 296 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 CTSDP07339 412 aaPredicted RBP8.36□□□□□ -1.07
CLIP3-203ENST00000586457 CTRB1P17538 263 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 RND3P61587 244 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 ERHP84090 104 aaKnown RBP8.36□□□□□ -1.07
CLIP3-203ENST00000586457 ZNF45Q02386 682 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 SPANXN2Q5MJ10 180 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 CTRB2Q6GPI1 263 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 CLEC19AQ6UXS0 136 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 CADM3Q8N126 398 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 OR10W1Q8NGF6 305 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 OR4D10Q8NGI6 311 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 OR13C8Q8NGS7 320 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 MRGPRFQ96AM1 343 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 ENY2Q9NPA8 101 aa8.36□□□□□ -1.07
CLIP3-203ENST00000586457 CMYA5Q8N3K9 4069 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 PPP5D1E7EU14 171 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 ZNF701M0R085 212 aaPredicted RBP8.35□□□□□ -1.07
CLIP3-203ENST00000586457 GSTZ1O43708 216 aaPredicted RBP8.35□□□□□ -1.07
CLIP3-203ENST00000586457 OR2C1O95371 312 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 CLEC3BP05452 202 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 PTBP1P26599 531 aaKnown RBP eCLIP8.35□□□□□ -1.07
CLIP3-203ENST00000586457 SNCAP37840 140 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 SUB1P53999 127 aaKnown RBP eCLIP8.35□□□□□ -1.07
CLIP3-203ENST00000586457 SURF2Q15527 256 aaPredicted RBP8.35□□□□□ -1.07
CLIP3-203ENST00000586457 SP6Q3SY56 376 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 FAAP20Q6NZ36 180 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 PLET1Q6UQ28 207 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 LHFPL1Q86WI0 220 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 SGPP2Q8IWX5 399 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 Q8N402 240 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 TOMM5Q8N4H5 51 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 GDPD1Q8N9F7 314 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 OR51S1Q8NGJ8 323 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 DYNLRB2Q8TF09 96 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 PLEKHA3Q9HB20 300 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 NDUFA4L2Q9NRX3 87 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 SMAD5-AS1Q9Y6J3 95 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 S4R3C0 116 aa8.35□□□□□ -1.07
CLIP3-203ENST00000586457 TGP01266 2768 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 PIGBOS1A0A0B4J2F0 54 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 IGLC7A0M8Q6 106 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 ANKRD20A5PA0PJZ0 165 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 C15orf61A6NNL5 157 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 TRBV12-3P01733 135 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 ANXA3P12429 323 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 GP9P14770 177 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 SPNP16150 400 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 HSPE1P61604 102 aaKnown RBP8.34□□□□□ -1.07
CLIP3-203ENST00000586457 DHODHQ02127 395 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 LCN12Q6JVE5 192 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 C19orf35Q6ZS72 473 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 SLC35G3Q8N808 338 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 UBAC2Q8NBM4 344 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 OR4C16Q8NGL9 310 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 SEC22AQ96IW7 307 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 FANCD2OSQ96PS1 177 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 NXF2Q9GZY0 626 aaKnown RBP8.34□□□□□ -1.07
CLIP3-203ENST00000586457 PALMDQ9NP74 551 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 GAR1Q9NY12 217 aaKnown RBP8.34□□□□□ -1.07
CLIP3-203ENST00000586457 NDUFA13Q9P0J0 144 aa8.34□□□□□ -1.07
CLIP3-203ENST00000586457 IGLV11-55A0A075B6I3 123 aa8.33□□□□□ -1.08
CLIP3-203ENST00000586457 A0A1B0GW64 132 aa8.33□□□□□ -1.08
CLIP3-203ENST00000586457 BMPR1BO00238 502 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms