RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 VSTM2AQ8TAG5 236 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 S4R3C0 116 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 LOC102723971A0A1B0GUV8 181 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 SPSB3Q6PJ21 355 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 LHFPL4Q7Z7J7 247 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 OR51G1Q8NGK1 321 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 MALSU1Q96EH3 234 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 PSMG3Q9BT73 122 aaPredicted RBP10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 DOPEY2Q9Y3R5 2298 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 LOC105371267A0A1B0GV96 52 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 CLDN34H7C241 214 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 F2RL2O00254 374 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 PRR27Q6MZM9 219 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 OR4C13Q8NGP0 309 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 FBXL15Q9H469 300 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 COA4Q9NYJ1 87 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 CCDC168Q8NDH2 2452 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 C15orf62A8K5M9 175 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 H3BTX0 84 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 PRB4P10163 310 aaPredicted RBP10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 LOXL3P58215 753 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 RELBQ01201 579 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 RNF212Q495C1 297 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 METTL1Q9UBP6 276 aaKnown RBP10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 USP9YO00507 2555 aaPredicted RBP10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 IGHV3OR16-10A0A075B7F0 116 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 F6UZH7 168 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 CT45A6P0DMU7 189 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 CT45A5P0DMU8 189 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 CT45A7P0DMV0 189 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 FABP9Q0Z7S8 132 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 DHRS7BQ6IAN0 325 aaPredicted RBP10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 STPG3Q8N7X2 389 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 C15orf54Q8N8G6 183 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 TMEM37Q8WXS4 190 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 NPIPB3Q92617 1050 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 HIST1H2BAQ96A08 127 aa10.21□□□□□ -0.77
SMARCA4-208ENST00000585799 C15orf61A6NNL5 157 aa10.21□□□□□ -0.78
SMARCA4-208ENST00000585799 RPL27AP46776 148 aaKnown RBP10.21□□□□□ -0.78
SMARCA4-208ENST00000585799 RND2P52198 227 aa10.21□□□□□ -0.78
SMARCA4-208ENST00000585799 ZNF506Q5JVG8 444 aa10.21□□□□□ -0.78
SMARCA4-208ENST00000585799 OR1B1Q8NGR6 318 aa10.21□□□□□ -0.78
SMARCA4-208ENST00000585799 PPP5D1E7EU14 171 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 ATP5G3P48201 142 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 MEF2CQ06413 473 aaPredicted RBP10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 HEPN1Q6WQI6 88 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 OR4X1Q8NH49 305 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 FAM210BQ96KR6 192 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 TGIF2-C20orf24A0A0A6YYL0 155 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 NDUFA2O43678 99 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 PROP1O75360 226 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 CFHR2P36980 270 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 GATA4P43694 442 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 OR2T6Q8NHC8 308 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 UPK2O00526 184 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 MOSP00540 346 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 IL6RP08887 468 aaPredicted RBP10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 WNT2P09544 360 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 TAS2R45P59539 299 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 SUMO1P63165 101 aaKnown RBP10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 DPPA3Q6W0C5 159 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 SSX3Q99909 188 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 CLEC7AQ9BXN2 247 aa10.2□□□□□ -0.78
SMARCA4-208ENST00000585799 ZNF320A2RRD8 509 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 UBE2L3P68036 154 aaKnown RBP10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 LCN2P80188 198 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 SSX8Q7RTT4 187 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 TMEM186Q96B77 213 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 FAM103A1Q9BTL3 118 aaKnown RBP10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 PARLQ9H300 379 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 NAT8Q9UHE5 227 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 PGPEP1LA6NFU8 196 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 IGKV1D-33P01593 117 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 IGKV1-33P01594 117 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 LINC00869P0C866 280 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 RD3LP0DJH9 198 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 GNLYP22749 145 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 PPOXP50336 477 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 LYZP61626 148 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 SGK494Q96LW2 274 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 DSCAMO60469 2012 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 LHBP01229 141 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 GALR1P47211 349 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 KLRD1Q13241 179 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 TREML4Q6UXN2 200 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 SSX7Q7RTT5 188 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 CTSZQ9UBR2 303 aa10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 TIMM8BQ9Y5J9 83 aaPredicted RBP10.19□□□□□ -0.78
SMARCA4-208ENST00000585799 SHISA9B4DS77 424 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 RBFOX2O43251 390 aaKnown RBP eCLIP10.18□□□□□ -0.783e-7■■□□□ 14.3
SMARCA4-208ENST00000585799 NDUFS7O75251 213 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 SPATA31B1PQ5VZV4 182 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 KCNIP4Q6PIL6 250 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 UNQ6494/PRO21346Q6UXR6 183 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 NABP2Q9BQ15 211 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 ZNF835Q9Y2P0 537 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 TLN2Q9Y4G6 2542 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 A0A1W2PN81 502 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 SRRM4A7MD48 611 aaKnown RBP10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 BRWD1-AS2P59051 145 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms