RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 RELQ04864 619 aaPredicted RBP9.78□□□□□ -0.84
COPS3-218ENST00000584216 SPAG16Q8N0X2 631 aa9.78□□□□□ -0.84
COPS3-218ENST00000584216 C21orf62Q9NYP8 219 aa9.78□□□□□ -0.84
COPS3-218ENST00000584216 SMPXQ9UHP9 88 aa9.78□□□□□ -0.84
COPS3-218ENST00000584216 A0A1B0GVY2 172 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 IFITM5A6NNB3 132 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 HPRT1P00492 218 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 BRWD1-AS2P59051 145 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 ARPC4P59998 168 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 MLLT11Q13015 90 aaPredicted RBP9.77□□□□□ -0.85
COPS3-218ENST00000584216 CATR1Q13166 79 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 RCN1Q15293 331 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 CDNFQ49AH0 187 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 HACD4Q5VWC8 232 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 SLC25A24Q6NUK1 477 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 TMEM116Q8NCL8 245 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 ZBTB34Q8NCN2 500 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 ATG5Q9H1Y0 275 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 VCXQ9H320 206 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 ETV7Q9Y603 341 aa9.77□□□□□ -0.85
COPS3-218ENST00000584216 TRAV1-2A0A0B4J238 106 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 TRAV10A0A0B4J240 114 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 IGHV7-4-1A0A0J9YVY3 117 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 C15orf61A6NNL5 157 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 UPK2O00526 184 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 DEFB4AO15263 64 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 NUPL2O15504 423 aaKnown RBP9.76□□□□□ -0.85
COPS3-218ENST00000584216 ZNF207O43670 478 aaKnown RBP9.76□□□□□ -0.85
COPS3-218ENST00000584216 SCGNO76038 276 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 SERPINE2P07093 398 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 TRAPPC2P0DI81 140 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 TRAPPC2BP0DI82 140 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 OR13C7P0DN81 318 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 MYL9P24844 172 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 TFPI2P48307 235 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 FABP5Q01469 135 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 POU2AF1Q16633 256 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 Q56UQ5 140 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 TMEM41BQ5BJD5 291 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 UBAC2Q8NBM4 344 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 DMBX1Q8NFW5 382 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 RNF2Q99496 336 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 RHPN1-AS1Q9BWJ2 59 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 ANXA10Q9UJ72 324 aa9.76□□□□□ -0.85
COPS3-218ENST00000584216 VPS13DQ5THJ4 4388 aa9.75□□□□□ -0.85
COPS3-218ENST00000584216 IGHV3OR16-8A0A075B7F1 116 aa9.75□□□□□ -0.85
COPS3-218ENST00000584216 PRSS29PA6NIE9 313 aa9.75□□□□□ -0.85
COPS3-218ENST00000584216 CHEK1O14757 476 aa9.75□□□□□ -0.85
COPS3-218ENST00000584216 TNFSF12O43508 249 aa9.75□□□□□ -0.85
COPS3-218ENST00000584216 DFFBO76075 338 aa9.75□□□□□ -0.85
COPS3-218ENST00000584216 GNG2P59768 71 aa9.75□□□□□ -0.85
COPS3-218ENST00000584216 ZNF124Q15973 351 aa9.75□□□□□ -0.85
COPS3-218ENST00000584216 PVRIGQ6DKI7 326 aa9.75□□□□□ -0.85
COPS3-218ENST00000584216 SCARB1Q8WTV0 552 aa9.75□□□□□ -0.85
COPS3-218ENST00000584216 SECTM1Q8WVN6 248 aa9.75□□□□□ -0.85
COPS3-218ENST00000584216 CHRDL1Q9BU40 450 aa9.75□□□□□ -0.85
COPS3-218ENST00000584216 TMEM140Q9NV12 185 aa9.75□□□□□ -0.85
COPS3-218ENST00000584216 TPRKBQ9Y3C4 175 aa9.75□□□□□ -0.85
COPS3-218ENST00000584216 F11RQ9Y624 299 aaKnown RBP9.75□□□□□ -0.85
COPS3-218ENST00000584216 IGHV4-4A0A075B6R2 117 aa9.74□□□□□ -0.85
COPS3-218ENST00000584216 CASQ2O14958 399 aaPredicted RBP9.74□□□□□ -0.85
COPS3-218ENST00000584216 YIF1AO95070 293 aa9.74□□□□□ -0.85
COPS3-218ENST00000584216 EIF4EP06730 217 aaKnown RBP9.74□□□□□ -0.85
COPS3-218ENST00000584216 P0DMU3 169 aa9.74□□□□□ -0.85
COPS3-218ENST00000584216 FAM231AP0DMU4 169 aa9.74□□□□□ -0.85
COPS3-218ENST00000584216 FAM231CP0DMU5 169 aa9.74□□□□□ -0.85
COPS3-218ENST00000584216 MIFP14174 115 aa9.74□□□□□ -0.85
COPS3-218ENST00000584216 OR10A3P58181 314 aa9.74□□□□□ -0.85
COPS3-218ENST00000584216 ERVK-16P61578 105 aa9.74□□□□□ -0.85
COPS3-218ENST00000584216 Q8NAQ8 132 aa9.74□□□□□ -0.85
COPS3-218ENST00000584216 OR10W1Q8NGF6 305 aa9.74□□□□□ -0.85
COPS3-218ENST00000584216 OR1L8Q8NGR8 309 aa9.74□□□□□ -0.85
COPS3-218ENST00000584216 LSM10Q969L4 123 aaKnown RBP9.74□□□□□ -0.85
COPS3-218ENST00000584216 RNF126Q9BV68 326 aa9.74□□□□□ -0.85
COPS3-218ENST00000584216 PLEKHA2Q9HB19 425 aa9.74□□□□□ -0.85
COPS3-218ENST00000584216 COMMD9Q9P000 198 aa9.74□□□□□ -0.85
COPS3-218ENST00000584216 ELF5Q9UKW6 265 aaPredicted RBP9.74□□□□□ -0.85
COPS3-218ENST00000584216 IGKV3-7A0A075B6H7 116 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 TRAV14DV4A0A0A6YYC5 116 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 SULT1C2O00338 296 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 RGS10O43665 173 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 RAB3BP20337 219 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 HLA-DMBP28068 263 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 WT1-ASQ06250 92 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 STHQ8IWL8 128 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 OR13F1Q8NGS4 319 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 NUDCD2Q8WVJ2 157 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 BORCS5Q969J3 196 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 OR10C1Q96KK4 312 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 GPHA2Q96T91 129 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 MGLLQ99685 303 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 GINS3Q9BRX5 216 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 CCL28Q9NRJ3 127 aa9.73□□□□□ -0.85
COPS3-218ENST00000584216 IGHV3-21A0A0B4J1V1 117 aa9.72□□□□□ -0.85
COPS3-218ENST00000584216 TRAV3A0A0B4J244 114 aa9.72□□□□□ -0.85
COPS3-218ENST00000584216 TMEM235A6NFC5 223 aa9.72□□□□□ -0.85
COPS3-218ENST00000584216 DNASE2O00115 360 aaPredicted RBP9.72□□□□□ -0.85
COPS3-218ENST00000584216 CTSGP08311 255 aa9.72□□□□□ -0.85
COPS3-218ENST00000584216 FCGR2CP31995 323 aa9.72□□□□□ -0.85
COPS3-218ENST00000584216 ZNF773Q6PK81 442 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms