RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 C19orf35Q6ZS72 473 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 GPHB5Q86YW7 130 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 SLC25A46Q96AG3 418 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 MOB3AQ96BX8 217 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 CCDC140Q96MF4 163 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 ZNF2Q9BSG1 426 aaPredicted RBP8.4□□□□□ -1.06
CCDC47-206ENST00000584112 TMEM140Q9NV12 185 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 SLC2A8Q9NY64 477 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 DMRT1Q9Y5R6 373 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 IGLV11-55A0A075B6I3 123 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 SMIM31A0A1B0GVY4 71 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 IGLC7A0M8Q6 106 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 CGB1A6NKQ9 187 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 TPPPO94811 219 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 OR2C1O95371 312 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 IGHV3-23P01764 117 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 HLA-AP01891 365 aaKnown RBP8.39□□□□□ -1.07
CCDC47-206ENST00000584112 PMP2P02689 132 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 RLN1P04808 185 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 IFNA6P05013 189 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 REG1AP05451 166 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 FOLR2P14207 255 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 MYOD1P15172 320 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 F2RP25116 425 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 S100GP29377 79 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 CD81P60033 236 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 HAGHQ16775 308 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 DEFB114Q30KQ6 69 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 HSD17B13Q7Z5P4 300 aaPredicted RBP8.39□□□□□ -1.07
CCDC47-206ENST00000584112 MAPKAPK5-AS1Q8N8E1 139 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 OR6F1Q8NGZ6 308 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 CMTM3Q96MX0 182 aa8.39□□□□□ -1.07
CCDC47-206ENST00000584112 QTRT1Q9BXR0 403 aaKnown RBP8.39□□□□□ -1.07
CCDC47-206ENST00000584112 TRAV3A0A0B4J244 114 aa8.38□□□□□ -1.07
CCDC47-206ENST00000584112 MARCH11A6NNE9 402 aa8.38□□□□□ -1.07
CCDC47-206ENST00000584112 A8MWP6 167 aa8.38□□□□□ -1.07
CCDC47-206ENST00000584112 GPR31O00270 319 aa8.38□□□□□ -1.07
CCDC47-206ENST00000584112 PGLYRP1O75594 196 aaPredicted RBP8.38□□□□□ -1.07
CCDC47-206ENST00000584112 APOA1P02647 267 aa8.38□□□□□ -1.07
CCDC47-206ENST00000584112 RBMY1A1P0DJD3 496 aaKnown RBP8.38□□□□□ -1.07
CCDC47-206ENST00000584112 GUCA2BQ16661 112 aa8.38□□□□□ -1.07
CCDC47-206ENST00000584112 LPCAT3Q6P1A2 487 aa8.38□□□□□ -1.07
CCDC47-206ENST00000584112 CADM3Q8N126 398 aa8.38□□□□□ -1.07
CCDC47-206ENST00000584112 OR1L8Q8NGR8 309 aa8.38□□□□□ -1.07
CCDC47-206ENST00000584112 DGCR14Q96DF8 476 aaKnown RBP8.38□□□□□ -1.07
CCDC47-206ENST00000584112 NEURL2Q9BR09 285 aa8.38□□□□□ -1.07
CCDC47-206ENST00000584112 SCPEP1Q9HB40 452 aa8.38□□□□□ -1.07
CCDC47-206ENST00000584112 ZC4H2Q9NQZ6 224 aa8.38□□□□□ -1.07
CCDC47-206ENST00000584112 S4R3C0 116 aa8.38□□□□□ -1.07
CCDC47-206ENST00000584112 ZNF320A2RRD8 509 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 MFSD2BA6NFX1 497 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 ZNF785A8K8V0 405 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 SNAPC5O75971 98 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 CLEC3BP05452 202 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 EIF4EP06730 217 aaKnown RBP8.37□□□□□ -1.07
CCDC47-206ENST00000584112 TRAPPC2P0DI81 140 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 TRAPPC2BP0DI82 140 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 CBLN1P23435 193 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 HRH1P35367 487 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 LPAR6P43657 344 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 TSPAN5P62079 268 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 ZNF57Q68EA5 555 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-206ENST00000584112 SLC16A13Q7RTY0 426 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 GDPD1Q8N9F7 314 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 IL17DQ8TAD2 202 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 VN1R17PQ8TDU5 208 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 GPX8Q8TED1 209 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 MARC2Q969Z3 335 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 FUNDC2Q9BWH2 189 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 FXYD6Q9H0Q3 95 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 PLEKHA3Q9HB20 300 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 FKBP11Q9NYL4 201 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 COMMD3Q9UBI1 195 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 CEPT1Q9Y6K0 416 aa8.37□□□□□ -1.07
CCDC47-206ENST00000584112 APOBP04114 4563 aaKnown RBP8.37□□□□□ -1.07
CCDC47-206ENST00000584112 TEX50A0A1B0GTY4 177 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 TMEM213A2RRL7 107 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 KRASP01116 189 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 SERPINE2P07093 398 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 OR13C7P0DN81 318 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 RPA2P15927 270 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 PTBP1P26599 531 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCDC47-206ENST00000584112 HLA-DMAP28067 261 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 GPR183P32249 361 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 RCVRNP35243 200 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 VBP1P61758 197 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 NCS1P62166 190 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 ANKRD55Q3KP44 614 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 MZT2AQ6P582 158 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 PLET1Q6UQ28 207 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 OR10W1Q8NGF6 305 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 OR1L6Q8NGR2 347 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 ZNF502Q8TBZ5 544 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 FCAMRQ8WWV6 532 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 LSM10Q969L4 123 aaKnown RBP8.36□□□□□ -1.07
CCDC47-206ENST00000584112 WDR89Q96FK6 387 aaPredicted RBP8.36□□□□□ -1.07
CCDC47-206ENST00000584112 ATP6V0BQ99437 205 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 TSC22D3Q99576 134 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 NDUFA4L2Q9NRX3 87 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 FAM212BQ9NTI7 297 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms