RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 NHLRC4P0CG21 123 aaPredicted RBP15.56■□□□□ 0.08
SS18-224ENST00000584083 OR13C7P0DN81 318 aa15.56■□□□□ 0.08
SS18-224ENST00000584083 MRPS10P82664 201 aaKnown RBP15.56■□□□□ 0.08
SS18-224ENST00000584083 KLK9Q2XQG4 91 aa15.56■□□□□ 0.08
SS18-224ENST00000584083 STEAP1BQ6NZ63 245 aa15.56■□□□□ 0.08
SS18-224ENST00000584083 HSD17B13Q7Z5P4 300 aaPredicted RBP15.56■□□□□ 0.08
SS18-224ENST00000584083 LHFPL1Q86WI0 220 aa15.56■□□□□ 0.08
SS18-224ENST00000584083 OR4D10Q8NGI6 311 aa15.56■□□□□ 0.08
SS18-224ENST00000584083 CXorf58Q96LI9 332 aa15.56■□□□□ 0.08
SS18-224ENST00000584083 C6orf62Q9GZU0 229 aaPredicted RBP15.56■□□□□ 0.08
SS18-224ENST00000584083 FKBP11Q9NYL4 201 aa15.56■□□□□ 0.08
SS18-224ENST00000584083 THYN1Q9P016 225 aa15.56■□□□□ 0.08
SS18-224ENST00000584083 KLK9Q9UKQ9 250 aa15.56■□□□□ 0.08
SS18-224ENST00000584083 PRNDQ9UKY0 176 aa15.56■□□□□ 0.08
SS18-224ENST00000584083 H0Y980 276 aa15.55■□□□□ 0.08
SS18-224ENST00000584083 ARL3P36405 182 aa15.55■□□□□ 0.08
SS18-224ENST00000584083 PPP5CP53041 499 aa15.55■□□□□ 0.08
SS18-224ENST00000584083 PIGPP57054 158 aa15.55■□□□□ 0.08
SS18-224ENST00000584083 IL18Q14116 193 aa15.55■□□□□ 0.08
SS18-224ENST00000584083 SCGB2B2Q4G0G5 96 aa15.55■□□□□ 0.08
SS18-224ENST00000584083 H2BFWTQ7Z2G1 175 aa15.55■□□□□ 0.08
SS18-224ENST00000584083 ISOC1Q96CN7 298 aa15.55■□□□□ 0.08
SS18-224ENST00000584083 ZNF486Q96H40 463 aaPredicted RBP15.55■□□□□ 0.08
SS18-224ENST00000584083 CCDC140Q96MF4 163 aa15.55■□□□□ 0.08
SS18-224ENST00000584083 TSC22D3Q99576 134 aa15.55■□□□□ 0.08
SS18-224ENST00000584083 NDUFA4L2Q9NRX3 87 aa15.55■□□□□ 0.08
SS18-224ENST00000584083 SIGLEC8Q9NYZ4 499 aa15.55■□□□□ 0.08
SS18-224ENST00000584083 DMRT1Q9Y5R6 373 aa15.55■□□□□ 0.08
SS18-224ENST00000584083 TRBV7-1A0A0A6YYK4 115 aa15.54■□□□□ 0.08
SS18-224ENST00000584083 MFSD2BA6NFX1 497 aa15.54■□□□□ 0.08
SS18-224ENST00000584083 H3BMQ9 156 aa15.54■□□□□ 0.08
SS18-224ENST00000584083 CD74P04233 296 aa15.54■□□□□ 0.08
SS18-224ENST00000584083 MECP2P51608 486 aaKnown RBP15.54■□□□□ 0.08
SS18-224ENST00000584083 RND3P61587 244 aa15.54■□□□□ 0.08
SS18-224ENST00000584083 SSBP1Q04837 148 aaKnown RBP15.54■□□□□ 0.08
SS18-224ENST00000584083 WT1-ASQ06250 92 aa15.54■□□□□ 0.08
SS18-224ENST00000584083 SLC25A24Q6NUK1 477 aa15.54■□□□□ 0.08
SS18-224ENST00000584083 GDPD1Q8N9F7 314 aa15.54■□□□□ 0.08
SS18-224ENST00000584083 TERB2Q8NHR7 220 aa15.54■□□□□ 0.08
SS18-224ENST00000584083 ZFAND1Q8TCF1 268 aa15.54■□□□□ 0.08
SS18-224ENST00000584083 LSM10Q969L4 123 aaKnown RBP15.54■□□□□ 0.08
SS18-224ENST00000584083 IGKV1-39P01597 117 aa15.53■□□□□ 0.08
SS18-224ENST00000584083 IGKV1D-39P04432 117 aa15.53■□□□□ 0.08
SS18-224ENST00000584083 PTBP1P26599 531 aaKnown RBP eCLIP15.53■□□□□ 0.08
SS18-224ENST00000584083 LCN12Q6JVE5 192 aa15.53■□□□□ 0.08
SS18-224ENST00000584083 OR5B3Q8NH48 314 aa15.53■□□□□ 0.08
SS18-224ENST00000584083 OR4A16Q8NH70 328 aa15.53■□□□□ 0.08
SS18-224ENST00000584083 SMIM4Q8WVI0 70 aa15.53■□□□□ 0.08
SS18-224ENST00000584083 MRGPRFQ96AM1 343 aa15.53■□□□□ 0.08
SS18-224ENST00000584083 SEC22AQ96IW7 307 aa15.53■□□□□ 0.08
SS18-224ENST00000584083 TMEM56Q96MV1 263 aa15.53■□□□□ 0.08
SS18-224ENST00000584083 COPZ2Q9P299 210 aa15.53■□□□□ 0.08
SS18-224ENST00000584083 RABL2AQ9UBK7 228 aaPredicted RBP15.53■□□□□ 0.08
SS18-224ENST00000584083 RABL2BQ9UNT1 228 aa15.53■□□□□ 0.08
SS18-224ENST00000584083 DNAH9Q9NYC9 4486 aa15.53■□□□□ 0.08
SS18-224ENST00000584083 C15orf61A6NNL5 157 aa15.52■□□□□ 0.08
SS18-224ENST00000584083 CLEC3BP05452 202 aa15.52■□□□□ 0.08
SS18-224ENST00000584083 MEF2DQ14814 521 aa15.52■□□□□ 0.08
SS18-224ENST00000584083 GPHB5Q86YW7 130 aa15.52■□□□□ 0.08
SS18-224ENST00000584083 Q8N402 240 aa15.52■□□□□ 0.08
SS18-224ENST00000584083 CCDC71LQ8N9Z2 235 aa15.52■□□□□ 0.08
SS18-224ENST00000584083 DYNLRB2Q8TF09 96 aa15.52■□□□□ 0.08
SS18-224ENST00000584083 SLIRPQ9GZT3 109 aaKnown RBP15.52■□□□□ 0.08
SS18-224ENST00000584083 ZC4H2Q9NQZ6 224 aa15.52■□□□□ 0.08
SS18-224ENST00000584083 TMEM14BQ9NUH8 114 aa15.52■□□□□ 0.08
SS18-224ENST00000584083 ZNF320A2RRD8 509 aa15.51■□□□□ 0.07
SS18-224ENST00000584083 DBX1A6NMT0 343 aa15.51■□□□□ 0.07
SS18-224ENST00000584083 CTDSPLO15194 276 aa15.51■□□□□ 0.07
SS18-224ENST00000584083 FAM106AQ4KMX7 169 aa15.51■□□□□ 0.07
SS18-224ENST00000584083 FAAP20Q6NZ36 180 aa15.51■□□□□ 0.07
SS18-224ENST00000584083 OR13C8Q8NGS7 320 aa15.51■□□□□ 0.07
SS18-224ENST00000584083 MCFD2Q8NI22 146 aa15.51■□□□□ 0.07
SS18-224ENST00000584083 MARCH1Q8TCQ1 289 aa15.51■□□□□ 0.07
SS18-224ENST00000584083 TP53RKQ96S44 253 aa15.51■□□□□ 0.07
SS18-224ENST00000584083 F11RQ9Y624 299 aaKnown RBP15.51■□□□□ 0.07
SS18-224ENST00000584083 U3KQK5 164 aa15.51■□□□□ 0.07
SS18-224ENST00000584083 C3orf85A0A1B0GTC6 90 aa15.5■□□□□ 0.07
SS18-224ENST00000584083 IZUMO1RA6ND01 250 aa15.5■□□□□ 0.07
SS18-224ENST00000584083 CCDC160A6NGH7 325 aa15.5■□□□□ 0.07
SS18-224ENST00000584083 C2orf70A6NJV1 201 aa15.5■□□□□ 0.07
SS18-224ENST00000584083 DISC1C4P0D8 188 aa15.5■□□□□ 0.07
SS18-224ENST00000584083 LGALS9O00182 355 aa15.5■□□□□ 0.07
SS18-224ENST00000584083 FRMD6-AS1P0C7T7 363 aa15.5■□□□□ 0.07
SS18-224ENST00000584083 GPR183P32249 361 aa15.5■□□□□ 0.07
SS18-224ENST00000584083 SGPP2Q8IWX5 399 aa15.5■□□□□ 0.07
SS18-224ENST00000584083 Q8N1Y9 231 aa15.5■□□□□ 0.07
SS18-224ENST00000584083 ZNF502Q8TBZ5 544 aa15.5■□□□□ 0.07
SS18-224ENST00000584083 VN1R17PQ8TDU5 208 aa15.5■□□□□ 0.07
SS18-224ENST00000584083 RSL24D1Q9UHA3 163 aaKnown RBP15.5■□□□□ 0.07
SS18-224ENST00000584083 CEPT1Q9Y6K0 416 aa15.5■□□□□ 0.07
SS18-224ENST00000584083 AKAIN1P0CW23 69 aa15.49■□□□□ 0.07
SS18-224ENST00000584083 FOLR2P14207 255 aa15.49■□□□□ 0.07
SS18-224ENST00000584083 TNFSF8P32971 234 aa15.49■□□□□ 0.07
SS18-224ENST00000584083 TRIM16LQ309B1 348 aa15.49■□□□□ 0.07
SS18-224ENST00000584083 SP6Q3SY56 376 aa15.49■□□□□ 0.07
SS18-224ENST00000584083 PLET1Q6UQ28 207 aa15.49■□□□□ 0.07
SS18-224ENST00000584083 ADAMTSL5Q6ZMM2 481 aa15.49■□□□□ 0.07
SS18-224ENST00000584083 OR2K2Q8NGT1 345 aa15.49■□□□□ 0.07
SS18-224ENST00000584083 C14orf166Q9Y224 244 aaKnown RBP15.49■□□□□ 0.07
SS18-224ENST00000584083 FABP12A6NFH5 140 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms