RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 NSG2Q9Y328 171 aa9.21□□□□□ -0.94
CDRT1-207ENST00000583965 TEX50A0A1B0GTY4 177 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 C13orf42A0A1B0GVH6 325 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 SH2D7A6NKC9 451 aaPredicted RBP9.2□□□□□ -0.94
CDRT1-207ENST00000583965 FAM25EA8MYX2 175 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 FAM90A26D6RGX4 464 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 ATP6V0E1O15342 81 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 ST8SIA3O43173 380 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 PITX3O75364 302 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 MPC2O95563 127 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 HKR1P10072 659 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 PSMB6P28072 239 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 VDAC2P45880 294 aaPredicted RBP9.2□□□□□ -0.94
CDRT1-207ENST00000583965 SPCS3P61009 180 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 NDPQ00604 133 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 TMEM267Q0VDI3 215 aaPredicted RBP9.2□□□□□ -0.94
CDRT1-207ENST00000583965 IAH1Q2TAA2 248 aaPredicted RBP9.2□□□□□ -0.94
CDRT1-207ENST00000583965 PDLIM3Q53GG5 364 aaPredicted RBP9.2□□□□□ -0.94
CDRT1-207ENST00000583965 Q6ZS46 218 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 HSD17B13Q7Z5P4 300 aaPredicted RBP9.2□□□□□ -0.94
CDRT1-207ENST00000583965 PRIMA1Q86XR5 153 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 MRPL41Q8IXM3 137 aaKnown RBP9.2□□□□□ -0.94
CDRT1-207ENST00000583965 ZBTB8BQ8NAP8 495 aaPredicted RBP9.2□□□□□ -0.94
CDRT1-207ENST00000583965 OR1S1Q8NH92 325 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 GRPEL2Q8TAA5 225 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 ABHD5Q8WTS1 349 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 TMEM68Q96MH6 324 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 GON7Q9BXV9 100 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 PARP11Q9NR21 331 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 NDUFA4L2Q9NRX3 87 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 ZFP57Q9NU63 452 aa9.2□□□□□ -0.94
CDRT1-207ENST00000583965 A0A1B0GUS0 222 aa9.19□□□□□ -0.94
CDRT1-207ENST00000583965 A0A1W2PN81 502 aa9.19□□□□□ -0.94
CDRT1-207ENST00000583965 MPTX1A8MV57 137 aa9.19□□□□□ -0.94
CDRT1-207ENST00000583965 MED6O75586 246 aa9.19□□□□□ -0.94
CDRT1-207ENST00000583965 IFNA17P01571 189 aa9.19□□□□□ -0.94
CDRT1-207ENST00000583965 PET100P0DJ07 73 aa9.19□□□□□ -0.94
CDRT1-207ENST00000583965 CHRNA7P36544 502 aa9.19□□□□□ -0.94
CDRT1-207ENST00000583965 PRCDQ00LT1 54 aa9.19□□□□□ -0.94
CDRT1-207ENST00000583965 AKIRIN2Q53H80 203 aa9.19□□□□□ -0.94
CDRT1-207ENST00000583965 C10orf55Q5SWW7 151 aa9.19□□□□□ -0.94
CDRT1-207ENST00000583965 C11orf87Q6NUJ2 197 aa9.19□□□□□ -0.94
CDRT1-207ENST00000583965 HSPB7Q9UBY9 170 aa9.19□□□□□ -0.94
CDRT1-207ENST00000583965 MSGN1A6NI15 193 aa9.18□□□□□ -0.94
CDRT1-207ENST00000583965 CGB1A6NKQ9 187 aa9.18□□□□□ -0.94
CDRT1-207ENST00000583965 LINC01548A6NM66 108 aa9.18□□□□□ -0.94
CDRT1-207ENST00000583965 INS-IGF2F8WCM5 200 aa9.18□□□□□ -0.94
CDRT1-207ENST00000583965 EGR2P11161 476 aaPredicted RBP9.18□□□□□ -0.94
CDRT1-207ENST00000583965 SRSF2Q01130 221 aaKnown RBP9.18□□□□□ -0.94
CDRT1-207ENST00000583965 TNFRSF9Q07011 255 aa9.18□□□□□ -0.94
CDRT1-207ENST00000583965 ZNF345Q14585 488 aa9.18□□□□□ -0.94
CDRT1-207ENST00000583965 LGALSLQ3ZCW2 172 aaPredicted RBP9.18□□□□□ -0.94
CDRT1-207ENST00000583965 PRSS54Q6PEW0 395 aa9.18□□□□□ -0.94
CDRT1-207ENST00000583965 STPG2Q8N412 459 aa9.18□□□□□ -0.94
CDRT1-207ENST00000583965 OR4D5Q8NGN0 318 aa9.18□□□□□ -0.94
CDRT1-207ENST00000583965 SERTAD4Q9NUC0 356 aa9.18□□□□□ -0.94
CDRT1-207ENST00000583965 FBXO7Q9Y3I1 522 aa9.18□□□□□ -0.94
CDRT1-207ENST00000583965 TRAV41A0A0B4J266 112 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 A0A1B0GW64 132 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 CLPSL1A2RUU4 121 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 TEX22C9J3V5 150 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 E7EUB6 86 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 LY86O95711 162 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 OPN1MWP04001 364 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 OPN1MW2P0DN77 364 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 OPN1MW3P0DN78 364 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 MYOD1P15172 320 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 C4BPBP20851 252 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 NKX2-1P43699 371 aaPredicted RBP9.17□□□□□ -0.94
CDRT1-207ENST00000583965 ID3Q02535 119 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 FOXL1Q12952 345 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 C19orf54Q5BKX5 351 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 UNQ5815/PRO19632Q6UWF5 114 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.17□□□□□ -0.94
CDRT1-207ENST00000583965 LFNGQ8NES3 379 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 LINC01006Q8NI28 216 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 THAP6Q8TBB0 222 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 FAM103A1Q9BTL3 118 aaKnown RBP9.17□□□□□ -0.94
CDRT1-207ENST00000583965 RNF126Q9BV68 326 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 HINT2Q9BX68 163 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 PLEKHA3Q9HB20 300 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 ENY2Q9NPA8 101 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 GSKIPQ9P0R6 139 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 TNFSF18Q9UNG2 199 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 HSPB11Q9Y547 144 aa9.17□□□□□ -0.94
CDRT1-207ENST00000583965 FBN1P35555 2871 aaKnown RBP9.16□□□□□ -0.94
CDRT1-207ENST00000583965 FXYD6-FXYD2A0A087WZ82 144 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 IGLC7A0M8Q6 106 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 NPIPB5A8MRT5 1133 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 CEBPZOSA8MTT3 80 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 H0YIZ8 118 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 CXCL2P19875 107 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 HOXA1P49639 335 aaPredicted RBP9.16□□□□□ -0.94
CDRT1-207ENST00000583965 SLC35B1P78383 322 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 ERHP84090 104 aaKnown RBP9.16□□□□□ -0.94
CDRT1-207ENST00000583965 OR2F1Q13607 317 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 RAB32Q13637 225 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 ECSCRQ19T08 205 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 TMEM95Q3KNT9 176 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 CXorf66Q5JRM2 361 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms