RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-225	ENST00000583438	BPIFB6	Q8NFQ5	453 aa		5.76	□□□□□ -1.49
PPP4R1-225	ENST00000583438	C2CD4C	Q8TF44	421 aa		5.76	□□□□□ -1.49
PPP4R1-225	ENST00000583438	PHLDA1	Q8WV24	401 aa	Predicted RBP	5.76	□□□□□ -1.49
PPP4R1-225	ENST00000583438	TMEM68	Q96MH6	324 aa		5.76	□□□□□ -1.49
PPP4R1-225	ENST00000583438	IGLV11-55	A0A075B6I3	123 aa		5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	IGLC7	A0M8Q6	106 aa		5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	IRGM	A1A4Y4	181 aa		5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	SMIM30	A4D0T7	59 aa		5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	NUPR2	A6NF83	97 aa		5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	MYL12B	O14950	172 aa		5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	FCGR3B	O75015	233 aa		5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	GGCT	O75223	188 aa	Known RBP	5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	CRYGC	P07315	174 aa		5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	NFYA	P23511	347 aa	Predicted RBP	5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	MAPK3	P27361	379 aa	Predicted RBP	5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	ARL3	P36405	182 aa		5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	NANOS2	P60321	138 aa	Known RBP	5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	OR52B4	Q8NGK2	314 aa		5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	GATAD1	Q8WUU5	269 aa		5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	FAM3D	Q96BQ1	224 aa		5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	RNF183	Q96D59	192 aa		5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	RIMS4	Q9H426	269 aa	Predicted RBP	5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438	TECR	Q9NZ01	308 aa	Known RBP	5.75	□□□□□ -1.49
PPP4R1-225	ENST00000583438		A0A075B6Q4	140 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	DEFB4A	O15263	64 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	ZNF207	O43670	478 aa	Known RBP	5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	SSX5	O60225	188 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	KBTBD11	O94819	623 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	RPA2	P15927	270 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	RPL35A	P18077	110 aa	Known RBP	5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	PSMB6	P28072	239 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	GPR183	P32249	361 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	SPHAR	Q15513	63 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	RAB11B	Q15907	218 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	SSX1	Q16384	188 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	RTL8B	Q17RB0	113 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	VMA21	Q3ZAQ7	101 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	LGALS9C	Q6DKI2	356 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	APRG1	Q8IVJ8	170 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	DHRSX	Q8N5I4	330 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	OR10W1	Q8NGF6	305 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	OR10J5	Q8NHC4	309 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	TMEM167A	Q8TBQ9	72 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	ZNF502	Q8TBZ5	544 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	CHRDL1	Q9BU40	450 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	SCRT1	Q9BWW7	348 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	ZNF436	Q9C0F3	470 aa	Predicted RBP	5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	PLGRKT	Q9HBL7	147 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	SLC2A9	Q9NRM0	540 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	ZNF257	Q9Y2Q1	563 aa		5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	RBMX2	Q9Y388	322 aa	Known RBP	5.74	□□□□□ -1.49
PPP4R1-225	ENST00000583438	IGHV3-21	A0A0B4J1V1	117 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	ZNF320	A2RRD8	509 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	DENR	O43583	198 aa	Known RBP	5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	HLA-DQB1	P01920	261 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	HIST1H1D	P16402	221 aa	Known RBP	5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	CALR	P27797	417 aa	Known RBP	5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	BMI1	P35226	326 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	MAP2K4	P45985	399 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	RPL27A	P46776	148 aa	Known RBP	5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	SERPINB10	P48595	397 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	OR2B8P	P59922	312 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	TATDN3	Q17R31	274 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	ZNF585B	Q52M93	769 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	TTC23	Q5W5X9	447 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438		Q6ZS49	121 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	KCTD9	Q7L273	389 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	SSX9	Q7RTT3	188 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	SLC16A13	Q7RTY0	426 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	MMD2	Q8IY49	270 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	MS4A15	Q8N5U1	240 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	TMEM217	Q8N7C4	229 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	OR10R2	Q8NGX6	335 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	NUDCD2	Q8WVJ2	157 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	TMEM190	Q8WZ59	177 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	RAB3C	Q96E17	227 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	URM1	Q9BTM9	101 aa	Known RBP	5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	CTDSP1	Q9GZU7	261 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	OR51E2	Q9H255	320 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	MAP6D1	Q9H9H5	199 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	TP53TG1	Q9Y2A0	90 aa		5.73	□□□□□ -1.49
PPP4R1-225	ENST00000583438	PTGES3L	E9PB15	166 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	DIRAS3	O95661	229 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	CLEC3B	P05452	202 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	GIG44	P09565	113 aa	Predicted RBP	5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	TPBG	Q13641	420 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	MED22	Q15528	200 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	TIMM50	Q3ZCQ8	353 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	OGFRL1	Q5TC84	451 aa	Predicted RBP	5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	C8orf59	Q8N0T1	100 aa	Predicted RBP	5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	FAM24B	Q8N5W8	94 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	ZNF645	Q8N7E2	425 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	OR56B1	Q8NGI3	324 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	OR1L6	Q8NGR2	347 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	OR5B3	Q8NH48	314 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	OR2A7	Q96R45	310 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	SPIN2A	Q99865	258 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	SPIN2B	Q9BPZ2	258 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	MND1	Q9BWT6	205 aa		5.72	□□□□□ -1.49
PPP4R1-225	ENST00000583438	APLN	Q9ULZ1	77 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms