RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CCNKO75909 580 aa12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 SCGB1D2O95969 90 aa12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 IGHG2P01859 326 aa12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 EGR2P11161 476 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 PSMB6P28072 239 aa12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 POLR2GP62487 172 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 UBA52P62987 128 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 PRCDQ00LT1 54 aa12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 RAB32Q13637 225 aa12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 C9orf152Q5JTZ5 239 aa12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 PPP1R1CQ8WVI7 109 aa12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 SRSF12Q8WXF0 261 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 NPFFR1Q9GZQ6 430 aa12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 MAGT1Q9H0U3 335 aa12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 ZFP57Q9NU63 452 aa12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 FAM181BA6NEQ2 426 aa12.9□□□□□ -0.34
CDK5RAP3-228ENST00000583363 SYNGR2O43760 224 aa12.9□□□□□ -0.34
CDK5RAP3-228ENST00000583363 MPC2O95563 127 aa12.9□□□□□ -0.34
CDK5RAP3-228ENST00000583363 VDAC2P45880 294 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-228ENST00000583363 NDPQ00604 133 aa12.9□□□□□ -0.34
CDK5RAP3-228ENST00000583363 Q5BKY6 102 aa12.9□□□□□ -0.34
CDK5RAP3-228ENST00000583363 SPINK9Q5DT21 86 aa12.9□□□□□ -0.34
CDK5RAP3-228ENST00000583363 AKAP14Q86UN6 197 aa12.9□□□□□ -0.34
CDK5RAP3-228ENST00000583363 ARPC1AQ92747 370 aa12.9□□□□□ -0.34
CDK5RAP3-228ENST00000583363 NEURL2Q9BR09 285 aa12.9□□□□□ -0.34
CDK5RAP3-228ENST00000583363 RNF126Q9BV68 326 aa12.9□□□□□ -0.34
CDK5RAP3-228ENST00000583363 HINT2Q9BX68 163 aa12.9□□□□□ -0.34
CDK5RAP3-228ENST00000583363 PRSS22Q9GZN4 317 aa12.9□□□□□ -0.34
CDK5RAP3-228ENST00000583363 LSM5Q9Y4Y9 91 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-228ENST00000583363 CEBPZOSA8MTT3 80 aa12.89□□□□□ -0.35
CDK5RAP3-228ENST00000583363 TEX22C9J3V5 150 aa12.89□□□□□ -0.35
CDK5RAP3-228ENST00000583363 INS-IGF2F8WCM5 200 aa12.89□□□□□ -0.35
CDK5RAP3-228ENST00000583363 H0YIZ8 118 aa12.89□□□□□ -0.35
CDK5RAP3-228ENST00000583363 TRIM77I1YAP6 450 aa12.89□□□□□ -0.35
CDK5RAP3-228ENST00000583363 RPL15P61313 204 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-228ENST00000583363 OR10W1Q8NGF6 305 aa12.89□□□□□ -0.35
CDK5RAP3-228ENST00000583363 OR2T35Q8NGX2 323 aa12.89□□□□□ -0.35
CDK5RAP3-228ENST00000583363 SGMS2Q8NHU3 365 aa12.89□□□□□ -0.35
CDK5RAP3-228ENST00000583363 GRPEL2Q8TAA5 225 aa12.89□□□□□ -0.35
CDK5RAP3-228ENST00000583363 SRSF8Q9BRL6 282 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-228ENST00000583363 C11orf1Q9H5F2 150 aa12.89□□□□□ -0.35
CDK5RAP3-228ENST00000583363 RCL1Q9Y2P8 373 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-228ENST00000583363 FBXO7Q9Y3I1 522 aa12.89□□□□□ -0.35
CDK5RAP3-228ENST00000583363 TRAV14DV4A0A0A6YYC5 116 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 A0A1W2PN81 502 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 WRBO00258 174 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 KCNAB3O43448 404 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 RLN2P04090 185 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 CHRNA7P36544 502 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 PAX9P55771 341 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 S100A10P60903 97 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 FGL1Q08830 312 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 LRRC37A5PQ49AS3 106 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 SLC35E3Q7Z769 313 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 TCTE3Q8IZS6 198 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 Q8N2B8 174 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 DTD1Q8TEA8 209 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 SMIM8Q96KF7 97 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 RAB40CQ96S21 281 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 FAM103A1Q9BTL3 118 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 ZNF702PQ9H963 129 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 PLEKHA3Q9HB20 300 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 ENY2Q9NPA8 101 aa12.88□□□□□ -0.35
CDK5RAP3-228ENST00000583363 IGLC7A0M8Q6 106 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 G3V3Q6 166 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 SMLR1H3BR10 107 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 ATP6V0E1O15342 81 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 SSSCA1O60232 199 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 DEDDO75618 318 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 TMEM50AO95807 157 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 IGF1P05019 195 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 IAPPP10997 89 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 HOXA1P49639 335 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 CRIP2P52943 208 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 ERHP84090 104 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 WT1-ASQ06250 92 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 CD300CQ08708 224 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 ASPHD1Q5U4P2 390 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 C11orf87Q6NUJ2 197 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 HSD17B13Q7Z5P4 300 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 OR2C3Q8N628 320 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 ABHD5Q8WTS1 349 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 TMEM68Q96MH6 324 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 HIPK2Q9H2X6 1198 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 PARP11Q9NR21 331 aa12.87□□□□□ -0.35
CDK5RAP3-228ENST00000583363 WIPF1O43516 503 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 TSPAN9O75954 239 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 LY86O95711 162 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 CRYBA1P05813 215 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 OR13C7P0DN81 318 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 LYL1P12980 280 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 TAS2R30P59541 319 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 TMEM267Q0VDI3 215 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 AKIRIN2Q53H80 203 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 PRSS54Q6PEW0 395 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 Q6ZSV7 163 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 TTC9CQ8N5M4 171 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 LFNGQ8NES3 379 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 CIB3Q96Q77 187 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 HEYLQ9NQ87 328 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms