RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 AP2S1P53680 142 aaPredicted RBP7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 EXOSC2Q13868 293 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 DIAPH2-AS1Q14236 149 aa7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 TMEM30BQ3MIR4 351 aa7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 CXorf66Q5JRM2 361 aaPredicted RBP7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 TEX38Q6PEX7 206 aa7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 FAM219AQ8IW50 185 aa7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 TCTEX1D1Q8N7M0 179 aa7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 OR10X1Q8NGY0 326 aa7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 EDARADDQ8WWZ3 215 aa7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 LEAP2Q969E1 77 aa7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 RAX2Q96IS3 184 aa7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 HSD17B10Q99714 261 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 SPIN2AQ99865 258 aa7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 SPIN2BQ9BPZ2 258 aa7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 OR2D2Q9H210 308 aa7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 IFI27L2Q9H2X8 130 aa7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 GNG12Q9UBI6 72 aa7.62□□□□□ -1.19
CDK5RAP3-227ENST00000583352 E5RGE8 158 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 CCL24O00175 119 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 AP4M1O00189 453 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 ATP6V1G1O75348 118 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 PET100P0DJ07 73 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 DUTP33316 252 aaKnown RBP7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 HTR2BP41595 481 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 LINC00205P59089 165 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 S100A10P60903 97 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 C9orf66Q5T8R8 295 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 MOB3BQ86TA1 216 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 DUX3Q96PT4 197 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 ARPC5LQ9BPX5 153 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 ZNF251Q9BRH9 671 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 PLEKHA2Q9HB19 425 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 LIN7CQ9NUP9 197 aaKnown RBP7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 NSG2Q9Y328 171 aa7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 LSM5Q9Y4Y9 91 aaKnown RBP7.61□□□□□ -1.19
CDK5RAP3-227ENST00000583352 IGHV1-3A0A0C4DH29 117 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 A0A1W2PPE3 182 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 RPS10-NUDT3A0A1W2PQS6 291 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 KANTRA0A1W2PQU2 76 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 LINC00862A6NCI5 91 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 NCBP2LA6PVI3 153 aaKnown RBP7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 LINC00473A8K010 186 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 GAPDHP04406 335 aaKnown RBP7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 RPLP1P05386 114 aaKnown RBP7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 RPL12P30050 165 aaKnown RBP7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 NUP62P37198 522 aaPredicted RBP7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 NKX2-1P43699 371 aaPredicted RBP7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 GPR12P47775 334 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 P2RY1P47900 373 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 PAX9P55771 341 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 ZNF816Q0VGE8 651 aaPredicted RBP7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 EBI3Q14213 229 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 CLLU1Q5K131 121 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 TGIF2LXQ8IUE1 241 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 ODF3L1Q8IXM7 274 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 SPAG16Q8N0X2 631 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 OR2T10Q8NGZ9 312 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 BSCL2Q96G97 398 aaPredicted RBP7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 EAF1Q96JC9 268 aaPredicted RBP7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 PRR25Q96S07 402 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 UBQLN2Q9UHD9 624 aa7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 RCL1Q9Y2P8 373 aaKnown RBP7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 LSM4Q9Y4Z0 139 aaKnown RBP7.6□□□□□ -1.19
CDK5RAP3-227ENST00000583352 IGHV3-72A0A0B4J1Y9 119 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 LINC01548A6NM66 108 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 SEC14L6B5MCN3 397 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 C3orf84H3BNL1 204 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 TAAR5O14804 337 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 TMEM50AO95807 157 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 SCGB1D2O95969 90 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 ELANEP08246 267 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 IL3RAP26951 378 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 CDX1P47902 265 aaPredicted RBP7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 REG1BP48304 166 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 POLR2GP62487 172 aaKnown RBP eCLIP7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 CATR1Q13166 79 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 FOXE3Q13461 319 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 SMCO1Q147U7 214 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 IZUMO4Q1ZYL8 232 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 DEFB136Q30KP8 78 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 Q3ZCU0 254 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 RPL39P5Q59GN2 51 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 THOC7Q6I9Y2 204 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 LCNL1Q6ZST4 164 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 SLC25A48Q6ZT89 311 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 LINC00311Q8N616 119 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 C8orf31Q8N9H6 132 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 STOML3Q8TAV4 291 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 CD300LFQ8TDQ1 290 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 SCARB1Q8WTV0 552 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 TCTEX1D2Q8WW35 142 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 ST8SIA2Q92186 375 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 DDB2Q92466 427 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 RASL11BQ9BPW5 248 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 ABHD14AQ9BUJ0 271 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 COA4Q9NYJ1 87 aa7.59□□□□□ -1.19
CDK5RAP3-227ENST00000583352 KMT2CQ8NEZ4 4911 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-227ENST00000583352 FAM24AA6NFZ4 105 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms