RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 GLT8D1Q68CQ7 371 aa1.66□□□□□ -2.14
SMARCE1-219ENST00000583294 PTH2Q96A98 100 aa1.66□□□□□ -2.14
SMARCE1-219ENST00000583294 KIF24Q5T7B8 1368 aa1.66□□□□□ -2.14
SMARCE1-219ENST00000583294 CCDC88AQ3V6T2 1871 aa1.66□□□□□ -2.14
SMARCE1-219ENST00000583294 MAST2Q6P0Q8 1798 aa1.65□□□□□ -2.14
SMARCE1-219ENST00000583294 NOS1APO75052 506 aaPredicted RBP1.65□□□□□ -2.15
SMARCE1-219ENST00000583294 IGHV3-7P01780 117 aa1.65□□□□□ -2.15
SMARCE1-219ENST00000583294 CALB1P05937 261 aa1.65□□□□□ -2.15
SMARCE1-219ENST00000583294 RPSAP08865 295 aaKnown RBP1.65□□□□□ -2.15
SMARCE1-219ENST00000583294 EIF2B2P49770 351 aaKnown RBP1.65□□□□□ -2.15
SMARCE1-219ENST00000583294 ELOBQ15370 118 aa1.65□□□□□ -2.15
SMARCE1-219ENST00000583294 C10orf105Q8TEF2 133 aa1.65□□□□□ -2.15
SMARCE1-219ENST00000583294 KLK6Q92876 244 aa1.65□□□□□ -2.15
SMARCE1-219ENST00000583294 MRPS26Q9BYN8 205 aaKnown RBP1.65□□□□□ -2.15
SMARCE1-219ENST00000583294 EFCAB1Q9HAE3 211 aa1.65□□□□□ -2.15
SMARCE1-219ENST00000583294 CISHQ9NSE2 258 aa1.65□□□□□ -2.15
SMARCE1-219ENST00000583294 IL36BQ9NZH7 164 aa1.65□□□□□ -2.15
SMARCE1-219ENST00000583294 FLG2Q5D862 2391 aaPredicted RBP1.65□□□□□ -2.15
SMARCE1-219ENST00000583294 A0A0J9YY10 115 aa1.64□□□□□ -2.15
SMARCE1-219ENST00000583294 TRBV10-2A0A0K0K1G8 114 aa1.64□□□□□ -2.15
SMARCE1-219ENST00000583294 A0A1B0GX78 115 aa1.64□□□□□ -2.15
SMARCE1-219ENST00000583294 IBA57-AS1B1ANH7 110 aa1.64□□□□□ -2.15
SMARCE1-219ENST00000583294 F8W036 122 aa1.64□□□□□ -2.15
SMARCE1-219ENST00000583294 TNNC2P02585 160 aa1.64□□□□□ -2.15
SMARCE1-219ENST00000583294 ARL14EPLP0DKL9 152 aa1.64□□□□□ -2.15
SMARCE1-219ENST00000583294 RPL18Q07020 188 aaKnown RBP1.64□□□□□ -2.15
SMARCE1-219ENST00000583294 GRK1Q15835 563 aa1.64□□□□□ -2.15
SMARCE1-219ENST00000583294 GUK1Q16774 197 aa1.64□□□□□ -2.15
SMARCE1-219ENST00000583294 C9orf163Q8N9P6 203 aa1.64□□□□□ -2.15
SMARCE1-219ENST00000583294 LSM5Q9Y4Y9 91 aaKnown RBP1.64□□□□□ -2.15
SMARCE1-219ENST00000583294 TENM1Q9UKZ4 2725 aa1.63□□□□□ -2.15
SMARCE1-219ENST00000583294 TRBV20OR9-2A0A075B6H5 130 aa1.63□□□□□ -2.15
SMARCE1-219ENST00000583294 KRT7P08729 469 aa1.63□□□□□ -2.15
SMARCE1-219ENST00000583294 FGF6P10767 208 aa1.63□□□□□ -2.15
SMARCE1-219ENST00000583294 RAB5BP61020 215 aa1.63□□□□□ -2.15
SMARCE1-219ENST00000583294 SUPT4H1P63272 117 aaKnown RBP1.63□□□□□ -2.15
SMARCE1-219ENST00000583294 CDK5R1Q15078 307 aa1.63□□□□□ -2.15
SMARCE1-219ENST00000583294 HIST2H3PS2Q5TEC6 136 aa1.63□□□□□ -2.15
SMARCE1-219ENST00000583294 C8orf74Q6P047 294 aa1.63□□□□□ -2.15
SMARCE1-219ENST00000583294 RPS19BP1Q86WX3 136 aaKnown RBP1.63□□□□□ -2.15
SMARCE1-219ENST00000583294 OR8B3Q8NGG8 313 aa1.63□□□□□ -2.15
SMARCE1-219ENST00000583294 OPTNQ96CV9 577 aa1.63□□□□□ -2.15
SMARCE1-219ENST00000583294 DCCP43146 1447 aa1.63□□□□□ -2.15
SMARCE1-219ENST00000583294 IGKV3D-7A0A0C4DH55 119 aa1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 IGKV3OR2-268A0A0C4DH90 116 aa1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 A0A1B0GV50 99 aa1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 TRAPPC13A5PLN9 417 aa1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 DCTN3O75935 186 aa1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 UBBP0CG47 229 aa1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 PMAIP1Q13794 54 aa1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 NDUFA5Q16718 116 aa1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 OTUD6BQ8N6M0 293 aa1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 C15orf53Q8NAA6 179 aa1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 RETNLBQ9BQ08 111 aa1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 ADAT1Q9BUB4 502 aaKnown RBP1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 CYSTM1Q9H1C7 97 aa1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 CMTM6Q9NX76 183 aa1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 SOX21Q9Y651 276 aaPredicted RBP1.62□□□□□ -2.15
SMARCE1-219ENST00000583294 ARFGEF3Q5TH69 2177 aa1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 DIDO1Q9BTC0 2240 aaKnown RBP1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 IGKV2-40A0A087WW87 121 aaPredicted RBP1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 TGIF2-C20orf24A0A0A6YYL0 155 aa1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 EEF1E1-BLOC1S5C9J1V9 151 aa1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 SDCBPO00560 298 aaPredicted RBP1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 IGKV2D-40P01614 121 aaPredicted RBP1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 C1QAP02745 245 aa1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 PRM2P04554 102 aa1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 RPS4Y1P22090 263 aaKnown RBP1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 ALKAL1Q6UXT8 129 aa1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 DHFR2Q86XF0 187 aa1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 WDR61Q9GZS3 305 aaKnown RBP1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 GUCA1BQ9UMX6 200 aa1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 BAIAP2Q9UQB8 552 aa1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 RP1P56715 2156 aa1.61□□□□□ -2.15
SMARCE1-219ENST00000583294 MAP3K5Q99683 1374 aa1.6□□□□□ -2.15
SMARCE1-219ENST00000583294 GLI3P10071 1580 aa1.6□□□□□ -2.15
SMARCE1-219ENST00000583294 MED12LQ86YW9 2145 aa1.6□□□□□ -2.15
SMARCE1-219ENST00000583294 SMARCA4P51532 1647 aa1.6□□□□□ -2.15
SMARCE1-219ENST00000583294 FABP5P3A8MUU1 101 aa1.6□□□□□ -2.15
SMARCE1-219ENST00000583294 IFNA5P01569 189 aa1.6□□□□□ -2.15
SMARCE1-219ENST00000583294 KRTAP10-4P60372 401 aaPredicted RBP1.6□□□□□ -2.15
SMARCE1-219ENST00000583294 MAGOHP61326 146 aaKnown RBP1.6□□□□□ -2.15
SMARCE1-219ENST00000583294 SURF2Q15527 256 aaPredicted RBP1.6□□□□□ -2.15
SMARCE1-219ENST00000583294 LPCAT4Q643R3 524 aa1.6□□□□□ -2.15
SMARCE1-219ENST00000583294 UNQ6190/PRO20217Q6UXQ8 127 aa1.6□□□□□ -2.15
SMARCE1-219ENST00000583294 SETD5Q9C0A6 1442 aa1.59□□□□□ -2.15
SMARCE1-219ENST00000583294 IRGMA1A4Y4 181 aa1.59□□□□□ -2.15
SMARCE1-219ENST00000583294 NFYAP23511 347 aaPredicted RBP1.59□□□□□ -2.15
SMARCE1-219ENST00000583294 NKX2-5P52952 324 aaPredicted RBP1.59□□□□□ -2.15
SMARCE1-219ENST00000583294 FXYD2P54710 66 aa1.59□□□□□ -2.15
SMARCE1-219ENST00000583294 KISS1Q15726 138 aa1.59□□□□□ -2.15
SMARCE1-219ENST00000583294 AADACL3Q5VUY0 350 aa1.59□□□□□ -2.15
SMARCE1-219ENST00000583294 SYPL2Q5VXT5 272 aa1.59□□□□□ -2.15
SMARCE1-219ENST00000583294 SLC35B4Q969S0 331 aa1.59□□□□□ -2.15
SMARCE1-219ENST00000583294 LHFPL6Q9Y693 200 aa1.59□□□□□ -2.15
SMARCE1-219ENST00000583294 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.58□□□□□ -2.16
SMARCE1-219ENST00000583294 KCNK1O00180 336 aa1.58□□□□□ -2.16
SMARCE1-219ENST00000583294 MRPS14O60783 128 aaKnown RBP1.58□□□□□ -2.16
SMARCE1-219ENST00000583294 PMP2P02689 132 aa1.58□□□□□ -2.16
SMARCE1-219ENST00000583294 OR5G3P0C626 314 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms