RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 ZNF469Q96JG9 3925 aaPredicted RBP11.8□□□□□ -0.52
MKS1-211ENST00000581761 MTORP42345 2549 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 A0A1W2PRD5 423 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 A0A1W2PRF3 423 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 A0A1W2PRM7 423 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 SLC25A17O43808 307 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 FOXH1O75593 365 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 CA2P00918 260 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 IFNA4P05014 189 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 HOXB4P17483 251 aaPredicted RBP11.79□□□□□ -0.52
MKS1-211ENST00000581761 CEACAM3P40198 252 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 ATP5J2P56134 94 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 DLK1P80370 383 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 VWC2Q2TAL6 325 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 DPPA3Q6W0C5 159 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 SPNS3Q6ZMD2 512 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 BPIFCQ8NFQ6 507 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 TMEM170AQ8WVE7 144 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 RITA1Q96K30 269 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 NF1P21359 2839 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 ZFHX3Q15911 3703 aa11.79□□□□□ -0.52
MKS1-211ENST00000581761 A0A1W2PN81 502 aa11.78□□□□□ -0.52
MKS1-211ENST00000581761 A0A1W2PPI3 338 aa11.78□□□□□ -0.52
MKS1-211ENST00000581761 SMCO3A2RU48 225 aa11.78□□□□□ -0.52
MKS1-211ENST00000581761 AGPAT2O15120 278 aa11.78□□□□□ -0.52
MKS1-211ENST00000581761 CHRNA7P36544 502 aa11.78□□□□□ -0.52
MKS1-211ENST00000581761 PAX2Q02962 417 aa11.78□□□□□ -0.52
MKS1-211ENST00000581761 CLEC2AQ6UVW9 174 aa11.78□□□□□ -0.52
MKS1-211ENST00000581761 COMMD1Q8N668 190 aa11.78□□□□□ -0.52
MKS1-211ENST00000581761 TEX45Q8NA69 505 aa11.78□□□□□ -0.52
MKS1-211ENST00000581761 LYPD6BQ8NI32 183 aa11.78□□□□□ -0.52
MKS1-211ENST00000581761 C10orf105Q8TEF2 133 aa11.78□□□□□ -0.52
MKS1-211ENST00000581761 NARS2Q96I59 477 aaKnown RBP11.78□□□□□ -0.52
MKS1-211ENST00000581761 GGACTQ9BVM4 153 aa11.78□□□□□ -0.52
MKS1-211ENST00000581761 SIRPDQ9H106 197 aa11.78□□□□□ -0.52
MKS1-211ENST00000581761 ZNF430Q9H8G1 570 aaPredicted RBP11.78□□□□□ -0.52
MKS1-211ENST00000581761 TREM1Q9NP99 234 aa11.78□□□□□ -0.52
MKS1-211ENST00000581761 NIPBLQ6KC79 2804 aaeCLIP11.78□□□□□ -0.52
MKS1-211ENST00000581761 ARHGAP32A7KAX9 2087 aa11.77□□□□□ -0.52
MKS1-211ENST00000581761 A0A1B0GV50 99 aa11.77□□□□□ -0.53
MKS1-211ENST00000581761 NDUFS8O00217 210 aa11.77□□□□□ -0.53
MKS1-211ENST00000581761 DVL1P1P54792 670 aaPredicted RBP11.77□□□□□ -0.53
MKS1-211ENST00000581761 ELLP55199 621 aaPredicted RBP11.77□□□□□ -0.53
MKS1-211ENST00000581761 PSG5Q15238 335 aa11.77□□□□□ -0.53
MKS1-211ENST00000581761 LDLRAD2Q5SZI1 272 aa11.77□□□□□ -0.53
MKS1-211ENST00000581761 LHFPL4Q7Z7J7 247 aa11.77□□□□□ -0.53
MKS1-211ENST00000581761 MBD6Q96DN6 1003 aa11.77□□□□□ -0.53
MKS1-211ENST00000581761 TMEM231Q9H6L2 316 aa11.77□□□□□ -0.53
MKS1-211ENST00000581761 UNKLQ9H9P5 680 aaKnown RBP11.77□□□□□ -0.53
MKS1-211ENST00000581761 TPSG1Q9NRR2 321 aa11.77□□□□□ -0.53
MKS1-211ENST00000581761 NDUFA4L2Q9NRX3 87 aa11.77□□□□□ -0.53
MKS1-211ENST00000581761 PRSS46E5RG02 174 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 C17orf112F2Z3M2 114 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 RNASEK-C17orf49H0YIS7 233 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 TIMM23O14925 209 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 TOX4O94842 621 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 CRYGBP07316 175 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 H2AFB1P0C5Y9 115 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 CNTFRP26992 372 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 CD1BP29016 333 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 ATP5IP56385 69 aaPredicted RBP11.76□□□□□ -0.53
MKS1-211ENST00000581761 ERHP84090 104 aaKnown RBP11.76□□□□□ -0.53
MKS1-211ENST00000581761 SERF2P84101 59 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 SRSF3P84103 164 aaKnown RBP11.76□□□□□ -0.53
MKS1-211ENST00000581761 AKR1C1Q04828 323 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 HNF4GQ14541 408 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 DEFB113Q30KQ7 82 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 TMEM41BQ5BJD5 291 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 C10orf55Q5SWW7 151 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 CCDC28AQ8IWP9 274 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 MMD2Q8IY49 270 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 ZNF709Q8N972 641 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 LFNGQ8NES3 379 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 RNF5Q99942 180 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 FOXC2Q99958 501 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 VSIRQ9H7M9 311 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 WDR83OSQ9Y284 106 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 FAM96BQ9Y3D0 163 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 HILPDAQ9Y5L2 63 aa11.76□□□□□ -0.53
MKS1-211ENST00000581761 FAM157AC9JC47 383 aa11.75□□□□□ -0.53
MKS1-211ENST00000581761 HBE1P02100 147 aa11.75□□□□□ -0.53
MKS1-211ENST00000581761 RNASE2P10153 161 aaKnown RBP11.75□□□□□ -0.53
MKS1-211ENST00000581761 SNCAP37840 140 aa11.75□□□□□ -0.53
MKS1-211ENST00000581761 LGALS4P56470 323 aa11.75□□□□□ -0.53
MKS1-211ENST00000581761 RAB2AP61019 212 aa11.75□□□□□ -0.53
MKS1-211ENST00000581761 PRSS8Q16651 343 aa11.75□□□□□ -0.53
MKS1-211ENST00000581761 C2orf83Q53S99 150 aa11.75□□□□□ -0.53
MKS1-211ENST00000581761 MINOS1Q5TGZ0 78 aa11.75□□□□□ -0.53
MKS1-211ENST00000581761 CENPVQ7Z7K6 275 aaPredicted RBP11.75□□□□□ -0.53
MKS1-211ENST00000581761 OR10W1Q8NGF6 305 aa11.75□□□□□ -0.53
MKS1-211ENST00000581761 PERPQ96FX8 193 aa11.75□□□□□ -0.53
MKS1-211ENST00000581761 TBX15Q96SF7 602 aa11.75□□□□□ -0.53
MKS1-211ENST00000581761 NPCDR1Q9BY65 106 aa11.75□□□□□ -0.53
MKS1-211ENST00000581761 LPAR2Q9HBW0 351 aa11.75□□□□□ -0.53
MKS1-211ENST00000581761 METTL1Q9UBP6 276 aaKnown RBP11.75□□□□□ -0.53
MKS1-211ENST00000581761 MINOS1-NBL1R4GNA1 71 aa11.75□□□□□ -0.53
MKS1-211ENST00000581761 FLNAP21333 2647 aaKnown RBP11.75□□□□□ -0.53
MKS1-211ENST00000581761 PRRC2AP48634 2157 aaKnown RBP11.75□□□□□ -0.53
MKS1-211ENST00000581761 MED13LQ71F56 2210 aa11.74□□□□□ -0.53
MKS1-211ENST00000581761 IGHV4-61A0A0C4DH41 118 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms