RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 KLHDC1Q8N7A1 406 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 C3orf56Q8N813 242 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 OR5B3Q8NH48 314 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 WFDC12Q8WWY7 111 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 RAB40CQ96S21 281 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 HSPB9Q9BQS6 159 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 WNT10AQ9GZT5 417 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 TMEM14BQ9NUH8 114 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 ZNF580Q9UK33 172 aa12.25□□□□□ -0.45
SS18-216ENST00000580751 IGHV7-81A0A0B4J1V7 117 aa12.24□□□□□ -0.45
SS18-216ENST00000580751 CA2P00918 260 aa12.24□□□□□ -0.45
SS18-216ENST00000580751 MBPP02686 304 aaPredicted RBP12.24□□□□□ -0.45
SS18-216ENST00000580751 HNRNPCP07910 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
SS18-216ENST00000580751 TAS2R30P59541 319 aa12.24□□□□□ -0.45
SS18-216ENST00000580751 SPCS3P61009 180 aa12.24□□□□□ -0.45
SS18-216ENST00000580751 ZNF562Q6V9R5 426 aa12.24□□□□□ -0.45
SS18-216ENST00000580751 SPATA3Q8NHX4 192 aa12.24□□□□□ -0.45
SS18-216ENST00000580751 CIB3Q96Q77 187 aaPredicted RBP12.24□□□□□ -0.45
SS18-216ENST00000580751 CLCC1Q96S66 551 aa12.24□□□□□ -0.45
SS18-216ENST00000580751 GON7Q9BXV9 100 aa12.24□□□□□ -0.45
SS18-216ENST00000580751 TPSG1Q9NRR2 321 aa12.24□□□□□ -0.45
SS18-216ENST00000580751 E5RGE8 158 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 INS-IGF2F8WCM5 200 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 G3V3Q6 166 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 K7EPK0 472 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 RBMXL2O75526 392 aaKnown RBP12.23□□□□□ -0.45
SS18-216ENST00000580751 DEDDO75618 318 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 IGF1P05019 195 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 OR9G9P0C7N8 305 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 HSPE1P61604 102 aaKnown RBP12.23□□□□□ -0.45
SS18-216ENST00000580751 RPL8P62917 257 aaKnown RBP12.23□□□□□ -0.45
SS18-216ENST00000580751 CX3CL1P78423 397 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 TNFRSF9Q07011 255 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 RAB32Q13637 225 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 PRSS8Q16651 343 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 CXorf66Q5JRM2 361 aaPredicted RBP12.23□□□□□ -0.45
SS18-216ENST00000580751 SSX9Q7RTT3 188 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 NOXA1Q86UR1 476 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 VKORC1L1Q8N0U8 176 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 ZNF747Q9BV97 191 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 PARP11Q9NR21 331 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 NSG2Q9Y328 171 aa12.23□□□□□ -0.45
SS18-216ENST00000580751 WRBO00258 174 aa12.22□□□□□ -0.45
SS18-216ENST00000580751 FCN1O00602 326 aa12.22□□□□□ -0.45
SS18-216ENST00000580751 ATP6V0E1O15342 81 aa12.22□□□□□ -0.45
SS18-216ENST00000580751 SYNGR2O43760 224 aa12.22□□□□□ -0.45
SS18-216ENST00000580751 ACTL6BO94805 426 aa12.22□□□□□ -0.45
SS18-216ENST00000580751 SCAF4O95104 1147 aaKnown RBP12.22□□□□□ -0.45
SS18-216ENST00000580751 CNIH1O95406 144 aa12.22□□□□□ -0.45
SS18-216ENST00000580751 ATP5IP56385 69 aaPredicted RBP12.22□□□□□ -0.45
SS18-216ENST00000580751 GNB1P62873 340 aa12.22□□□□□ -0.45
SS18-216ENST00000580751 SLC35B1P78383 322 aa12.22□□□□□ -0.45
SS18-216ENST00000580751 CENPVQ7Z7K6 275 aaPredicted RBP12.22□□□□□ -0.45
SS18-216ENST00000580751 MRPL41Q8IXM3 137 aaKnown RBP12.22□□□□□ -0.45
SS18-216ENST00000580751 STPG2Q8N412 459 aa12.22□□□□□ -0.45
SS18-216ENST00000580751 ABHD5Q8WTS1 349 aa12.22□□□□□ -0.45
SS18-216ENST00000580751 ARPC1AQ92747 370 aa12.22□□□□□ -0.45
SS18-216ENST00000580751 WDR89Q96FK6 387 aaPredicted RBP12.22□□□□□ -0.45
SS18-216ENST00000580751 SRSF8Q9BRL6 282 aaKnown RBP12.22□□□□□ -0.45
SS18-216ENST00000580751 COMMD5Q9GZQ3 224 aa12.22□□□□□ -0.45
SS18-216ENST00000580751 WSB1Q9Y6I7 421 aa12.22□□□□□ -0.45
SS18-216ENST00000580751 TRAV14DV4A0A0A6YYC5 116 aa12.21□□□□□ -0.45
SS18-216ENST00000580751 PSMB11A5LHX3 300 aa12.21□□□□□ -0.45
SS18-216ENST00000580751 LINC01548A6NM66 108 aa12.21□□□□□ -0.45
SS18-216ENST00000580751 PLXNB1O43157 2135 aa12.21□□□□□ -0.45
SS18-216ENST00000580751 P2RY1P47900 373 aa12.21□□□□□ -0.45
SS18-216ENST00000580751 S100A10P60903 97 aa12.21□□□□□ -0.45
SS18-216ENST00000580751 NDPQ00604 133 aa12.21□□□□□ -0.45
SS18-216ENST00000580751 CD300CQ08708 224 aa12.21□□□□□ -0.45
SS18-216ENST00000580751 PJVKQ0ZLH3 352 aa12.21□□□□□ -0.45
SS18-216ENST00000580751 FXYD3Q14802 87 aa12.21□□□□□ -0.45
SS18-216ENST00000580751 HSD17B13Q7Z5P4 300 aaPredicted RBP12.21□□□□□ -0.45
SS18-216ENST00000580751 OR1L8Q8NGR8 309 aa12.21□□□□□ -0.45
SS18-216ENST00000580751 SMIM8Q96KF7 97 aa12.21□□□□□ -0.45
SS18-216ENST00000580751 NOL4LQ96MY1 436 aaPredicted RBP12.21□□□□□ -0.45
SS18-216ENST00000580751 RNF126Q9BV68 326 aa12.21□□□□□ -0.45
SS18-216ENST00000580751 ZNF430Q9H8G1 570 aaPredicted RBP12.21□□□□□ -0.45
SS18-216ENST00000580751 OR51B2Q9Y5P1 312 aa12.21□□□□□ -0.45
SS18-216ENST00000580751 TNCP24821 2201 aa12.21□□□□□ -0.46
SS18-216ENST00000580751 TSC22D2O75157 780 aa12.2□□□□□ -0.46
SS18-216ENST00000580751 SCGB1D2O95969 90 aa12.2□□□□□ -0.46
SS18-216ENST00000580751 IFNA17P01571 189 aa12.2□□□□□ -0.46
SS18-216ENST00000580751 C4BPBP20851 252 aa12.2□□□□□ -0.46
SS18-216ENST00000580751 NUP62P37198 522 aaPredicted RBP12.2□□□□□ -0.46
SS18-216ENST00000580751 CRIP2P52943 208 aaPredicted RBP12.2□□□□□ -0.46
SS18-216ENST00000580751 PRCDQ00LT1 54 aa12.2□□□□□ -0.46
SS18-216ENST00000580751 TMEM267Q0VDI3 215 aaPredicted RBP12.2□□□□□ -0.46
SS18-216ENST00000580751 TNXAQ16473 311 aa12.2□□□□□ -0.46
SS18-216ENST00000580751 IZUMO4Q1ZYL8 232 aa12.2□□□□□ -0.46
SS18-216ENST00000580751 LRRC37A5PQ49AS3 106 aa12.2□□□□□ -0.46
SS18-216ENST00000580751 SHISA2Q6UWI4 295 aa12.2□□□□□ -0.46
SS18-216ENST00000580751 ZNF546Q86UE3 836 aa12.2□□□□□ -0.46
SS18-216ENST00000580751 INO80EQ8NBZ0 244 aaPredicted RBP12.2□□□□□ -0.46
SS18-216ENST00000580751 OR4X2Q8NGF9 303 aa12.2□□□□□ -0.46
SS18-216ENST00000580751 WIPF2Q8TF74 440 aaPredicted RBP12.2□□□□□ -0.46
SS18-216ENST00000580751 QTRT1Q9BXR0 403 aaKnown RBP12.2□□□□□ -0.46
SS18-216ENST00000580751 C11orf1Q9H5F2 150 aa12.2□□□□□ -0.46
SS18-216ENST00000580751 MBD2Q9UBB5 411 aa12.2□□□□□ -0.46
SS18-216ENST00000580751 LINC00527Q9UJ94 153 aa12.2□□□□□ -0.46
SS18-216ENST00000580751 RCL1Q9Y2P8 373 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms