RNA–Protein interactions for RNA: ENST00000579245.1

ARHGAP28-209, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 3

Gene ARHGAP28, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-209ENST00000579245 C3orf62Q6ZUJ4 267 aa2.59□□□□□ -1.99
ARHGAP28-209ENST00000579245 SSX8Q7RTT4 187 aa2.59□□□□□ -1.99
ARHGAP28-209ENST00000579245 CTAGE3PQ8IX95 158 aa2.59□□□□□ -1.99
ARHGAP28-209ENST00000579245 SPICQ8N5J4 248 aa2.59□□□□□ -1.99
ARHGAP28-209ENST00000579245 OR2K2Q8NGT1 345 aa2.59□□□□□ -1.99
ARHGAP28-209ENST00000579245 CHMP6Q96FZ7 201 aa2.59□□□□□ -1.99
ARHGAP28-209ENST00000579245 YPEL4Q96NS1 127 aa2.59□□□□□ -1.99
ARHGAP28-209ENST00000579245 ANAPC13Q9BS18 74 aa2.59□□□□□ -1.99
ARHGAP28-209ENST00000579245 RTBDNQ9BSG5 229 aaPredicted RBP2.59□□□□□ -1.99
ARHGAP28-209ENST00000579245 SHANK2-AS3Q9BTD1 123 aa2.59□□□□□ -1.99
ARHGAP28-209ENST00000579245 SUCNR1Q9BXA5 334 aa2.59□□□□□ -1.99
ARHGAP28-209ENST00000579245 MED29Q9NX70 200 aa2.59□□□□□ -1.99
ARHGAP28-209ENST00000579245 NOSIPQ9Y314 301 aaKnown RBP2.59□□□□□ -1.99
ARHGAP28-209ENST00000579245 SCN3AQ9NY46 2000 aa2.59□□□□□ -2
ARHGAP28-209ENST00000579245 VPS13CQ709C8 3753 aa2.59□□□□□ -2
ARHGAP28-209ENST00000579245 ABCA1O95477 2261 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 ROS1P08922 2347 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 PKD1L1Q8TDX9 2849 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 ATP6V1G2-DDX39BF2Z307 99 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 GYG2O15488 501 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 SHOX2O60902 331 aaPredicted RBP2.58□□□□□ -2
ARHGAP28-209ENST00000579245 PDYNP01213 254 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 CRYBA1P05813 215 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 MSMBP08118 114 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 IL3P08700 152 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 PRTN3P24158 256 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 CRABP2P29373 138 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 TMEM33P57088 247 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 RAB25P57735 213 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 OR2B6P58173 313 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 UBA52P62987 128 aaKnown RBP2.58□□□□□ -2
ARHGAP28-209ENST00000579245 FLI1Q01543 452 aaPredicted RBP2.58□□□□□ -2
ARHGAP28-209ENST00000579245 Q499Y3 187 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 COMMD6Q7Z4G1 85 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 TMEM144Q7Z5S9 345 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 TEX29Q8N6K0 151 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 SIGLECL1Q8N7X8 197 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 OR52E4Q8NGH9 312 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 CDC26Q8NHZ8 85 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 C16orf78Q8WTQ4 265 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 OR5P2Q8WZ92 322 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 CCL17Q92583 94 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 APOL4Q9BPW4 351 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 ZNF436Q9C0F3 470 aaPredicted RBP2.58□□□□□ -2
ARHGAP28-209ENST00000579245 SLC25A31Q9H0C2 315 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 DYNLRB1Q9NP97 96 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 TREM1Q9NP99 234 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 UBQLN4Q9NRR5 601 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 VPS29Q9UBQ0 182 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.58□□□□□ -2
ARHGAP28-209ENST00000579245 KIAA1549Q9HCM3 1950 aa2.58□□□□□ -2
ARHGAP28-209ENST00000579245 DYSFO75923 2080 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 TGP01266 2768 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 HRNRQ86YZ3 2850 aaPredicted RBP2.57□□□□□ -2
ARHGAP28-209ENST00000579245 MGAM2Q2M2H8 2515 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 A0A1B0GXF2 115 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 FFAR1O14842 300 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 FSTL3O95633 263 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 SCGB1C2P0DMR2 95 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 LGALS7P47929 136 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 KCNJ3P48549 501 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 PSPHP78330 225 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 PLPPR5Q32ZL2 321 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 DEFB121Q5J5C9 76 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 TMPPEQ6ZT21 453 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 RPS27LQ71UM5 84 aaKnown RBP2.57□□□□□ -2
ARHGAP28-209ENST00000579245 AAED1Q7RTV5 226 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 C10orf107Q8IVU9 208 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 FAM9CQ8IZT9 166 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 OR8S1Q8NH09 359 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 CLDND2Q8NHS1 167 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 SCGB1C1Q8TD33 95 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 GPR119Q8TDV5 335 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 TWIST2Q8WVJ9 160 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 ARL5BQ96KC2 179 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 LINC01587Q99440 93 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 POPDC3Q9HBV1 291 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 EMC3Q9P0I2 261 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 ENPP5Q9UJA9 477 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 SNX24Q9Y343 169 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 NOTCH1P46531 2555 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 NBEAL2Q6ZNJ1 2754 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 DNAJC13O75165 2243 aa2.57□□□□□ -2
ARHGAP28-209ENST00000579245 IGLV3-32A0A0A0MS00 114 aa2.56□□□□□ -2
ARHGAP28-209ENST00000579245 IGHV1-18A0A0C4DH31 117 aa2.56□□□□□ -2
ARHGAP28-209ENST00000579245 CD300LBA8K4G0 201 aa2.56□□□□□ -2
ARHGAP28-209ENST00000579245 IGLL5B9A064 214 aa2.56□□□□□ -2
ARHGAP28-209ENST00000579245 GOLGA8RI6L899 631 aa2.56□□□□□ -2
ARHGAP28-209ENST00000579245 K7EPK0 472 aa2.56□□□□□ -2
ARHGAP28-209ENST00000579245 ISLRO14498 428 aa2.56□□□□□ -2
ARHGAP28-209ENST00000579245 GPR171O14626 319 aa2.56□□□□□ -2
ARHGAP28-209ENST00000579245 SCN2BO60939 215 aa2.56□□□□□ -2
ARHGAP28-209ENST00000579245 SMIM24O75264 130 aa2.56□□□□□ -2
ARHGAP28-209ENST00000579245 ANP32AP39687 249 aaKnown RBP2.56□□□□□ -2
ARHGAP28-209ENST00000579245 AQP5P55064 265 aa2.56□□□□□ -2
ARHGAP28-209ENST00000579245 KRTAP10-10P60014 251 aa2.56□□□□□ -2
ARHGAP28-209ENST00000579245 MRPS25P82663 173 aaKnown RBP2.56□□□□□ -2
ARHGAP28-209ENST00000579245 FOXF1Q12946 379 aa2.56□□□□□ -2
ARHGAP28-209ENST00000579245 UAP1Q16222 522 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms