RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 FKBP11Q9NYL4 201 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 CACNG5Q9UF02 275 aa6.71□□□□□ -1.34
NUP88-211ENST00000575976 FOXA2Q9Y261 457 aaPredicted RBP6.71□□□□□ -1.34
NUP88-211ENST00000575976 PLXNB1O43157 2135 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 PIGBOS1A0A0B4J2F0 54 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 ST8SIA3O43173 380 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 PRAF2O60831 178 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 ADAP1O75689 374 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 DHFRP00374 187 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 IGHG4P01861 327 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 TRAPPC2P0DI81 140 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 TRAPPC2BP0DI82 140 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 SULT1A3P0DMM9 295 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 SULT1A4P0DMN0 295 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 CD28P10747 220 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 HSPE1P61604 102 aaKnown RBP6.7□□□□□ -1.34
NUP88-211ENST00000575976 RGS21Q2M5E4 152 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 GGNBP1Q5YKI7 109 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 LCNL1Q6ZST4 164 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 ZNF429Q86V71 674 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 C12orf45Q8N5I9 185 aaPredicted RBP6.7□□□□□ -1.34
NUP88-211ENST00000575976 C3orf56Q8N813 242 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 UXS1Q8NBZ7 420 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 OR10W1Q8NGF6 305 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 OR5B3Q8NH48 314 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 TMEM68Q96MH6 324 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 HINT2Q9BX68 163 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 GPN1Q9HCN4 374 aaPredicted RBP6.7□□□□□ -1.34
NUP88-211ENST00000575976 NDUFA4L2Q9NRX3 87 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.7□□□□□ -1.34
NUP88-211ENST00000575976 ZNF257Q9Y2Q1 563 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 TMED3Q9Y3Q3 217 aa6.7□□□□□ -1.34
NUP88-211ENST00000575976 A0A1B0GU03 582 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 IGLC7A0M8Q6 106 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 MPTX1A8MV57 137 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 FBXO24O75426 580 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 NXPH3O95157 252 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 IFNA17P01571 189 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 IGLV1-40P01703 118 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 REG1AP05451 166 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 ELANEP08246 267 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 PF4V1P10720 104 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 AREGP15514 252 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 SMCO1Q147U7 214 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 SPINK9Q5DT21 86 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 TEX38Q6PEX7 206 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 C19orf35Q6ZS72 473 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 TTC9CQ8N5M4 171 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 COMMD1Q8N668 190 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 OR4X2Q8NGF9 303 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 OR5M8Q8NGP6 311 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 FAM110DQ8TAY7 271 aaPredicted RBP6.69□□□□□ -1.34
NUP88-211ENST00000575976 MS4A10Q96PG2 267 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 CITED1Q99966 193 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 SRSF8Q9BRL6 282 aaKnown RBP6.69□□□□□ -1.34
NUP88-211ENST00000575976 PDCD10Q9BUL8 212 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 KLK15Q9H2R5 256 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 COA4Q9NYJ1 87 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 MGAM2Q2M2H8 2515 aa6.69□□□□□ -1.34
NUP88-211ENST00000575976 TCRBV4S1A1TA0A5B7 111 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 NPIPB5A8MRT5 1133 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 SNRPGP15A8MWD9 76 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 CCSO14618 274 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 PITX3O75364 302 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 IFNA21P01568 189 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 PRH1P02810 166 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 RPLP1P05386 114 aaKnown RBP6.68□□□□□ -1.34
NUP88-211ENST00000575976 CRYGCP07315 174 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 OR13C7P0DN81 318 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 CTRB1P17538 263 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 PSMB8P28062 276 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 PSMB6P28072 239 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 PRCDQ00LT1 54 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 CD83Q01151 205 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 WT1-ASQ06250 92 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 FOXE3Q13461 319 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 OXA1LQ15070 435 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 TATDN3Q17R31 274 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 C2orf68Q2NKX9 166 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 AARDQ4LEZ3 155 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 CXorf66Q5JRM2 361 aaPredicted RBP6.68□□□□□ -1.34
NUP88-211ENST00000575976 CTRB2Q6GPI1 263 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 THOC7Q6I9Y2 204 aaKnown RBP6.68□□□□□ -1.34
NUP88-211ENST00000575976 SHISA2Q6UWI4 295 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 OR52E5Q8NH55 327 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 OR1S1Q8NH92 325 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 CITED2Q99967 270 aaPredicted RBP6.68□□□□□ -1.34
NUP88-211ENST00000575976 ZNF355PQ9NSJ1 428 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 TNCP24821 2201 aa6.68□□□□□ -1.34
NUP88-211ENST00000575976 C13orf42A0A1B0GVH6 325 aa6.67□□□□□ -1.34
NUP88-211ENST00000575976 C7orf66A4D0T2 115 aa6.67□□□□□ -1.34
NUP88-211ENST00000575976 H3BUA1 57 aa6.67□□□□□ -1.34
NUP88-211ENST00000575976 TRGV3P03979 118 aa6.67□□□□□ -1.34
NUP88-211ENST00000575976 SLC25A6P12236 298 aa6.67□□□□□ -1.34
NUP88-211ENST00000575976 RAB9AP51151 201 aa6.67□□□□□ -1.34
NUP88-211ENST00000575976 SPCS3P61009 180 aa6.67□□□□□ -1.34
NUP88-211ENST00000575976 KIAA0141Q14154 515 aaPredicted RBP6.67□□□□□ -1.34
NUP88-211ENST00000575976 PDLIM3Q53GG5 364 aaPredicted RBP6.67□□□□□ -1.34
NUP88-211ENST00000575976 C11orf87Q6NUJ2 197 aa6.67□□□□□ -1.34
NUP88-211ENST00000575976 TMEM65Q6PI78 240 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms