RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 SLC25A24Q6NUK1 477 aa11.35□□□□□ -0.59
CTNS-209ENST00000574776 OR2C3Q8N628 320 aa11.35□□□□□ -0.59
CTNS-209ENST00000574776 OR1L6Q8NGR2 347 aa11.35□□□□□ -0.59
CTNS-209ENST00000574776 CD300LFQ8TDQ1 290 aa11.35□□□□□ -0.59
CTNS-209ENST00000574776 SRSF8Q9BRL6 282 aaKnown RBP11.35□□□□□ -0.59
CTNS-209ENST00000574776 QTRT1Q9BXR0 403 aaKnown RBP11.35□□□□□ -0.59
CTNS-209ENST00000574776 ZNF436Q9C0F3 470 aaPredicted RBP11.35□□□□□ -0.59
CTNS-209ENST00000574776 Q9H521 79 aa11.35□□□□□ -0.59
CTNS-209ENST00000574776 IGHV3-21A0A0B4J1V1 117 aa11.34□□□□□ -0.59
CTNS-209ENST00000574776 OR2T8A6NH00 312 aa11.34□□□□□ -0.59
CTNS-209ENST00000574776 TGOLN2O43493 480 aa11.34□□□□□ -0.59
CTNS-209ENST00000574776 SERPINE2P07093 398 aa11.34□□□□□ -0.59
CTNS-209ENST00000574776 RFX2P48378 723 aa11.34□□□□□ -0.59
CTNS-209ENST00000574776 HERV-K104P61576 105 aa11.34□□□□□ -0.59
CTNS-209ENST00000574776 WT1-ASQ06250 92 aa11.34□□□□□ -0.59
CTNS-209ENST00000574776 VN1R17PQ8TDU5 208 aa11.34□□□□□ -0.59
CTNS-209ENST00000574776 C5orf66Q9H5L9 145 aa11.34□□□□□ -0.59
CTNS-209ENST00000574776 CYB5BO43169 146 aa11.33□□□□□ -0.6
CTNS-209ENST00000574776 XRCC3O43542 346 aa11.33□□□□□ -0.6
CTNS-209ENST00000574776 PGLYRP1O75594 196 aaPredicted RBP11.33□□□□□ -0.6
CTNS-209ENST00000574776 LPAR6P43657 344 aa11.33□□□□□ -0.6
CTNS-209ENST00000574776 NEDD8Q15843 81 aa11.33□□□□□ -0.6
CTNS-209ENST00000574776 DHRS11Q6UWP2 260 aa11.33□□□□□ -0.6
CTNS-209ENST00000574776 SLC38A6Q8IZM9 456 aa11.33□□□□□ -0.6
CTNS-209ENST00000574776 GDPD1Q8N9F7 314 aa11.33□□□□□ -0.6
CTNS-209ENST00000574776 OR1L8Q8NGR8 309 aa11.33□□□□□ -0.6
CTNS-209ENST00000574776 S100A16Q96FQ6 103 aaKnown RBP11.33□□□□□ -0.6
CTNS-209ENST00000574776 HINT2Q9BX68 163 aa11.33□□□□□ -0.6
CTNS-209ENST00000574776 IFT46Q9NQC8 304 aa11.33□□□□□ -0.6
CTNS-209ENST00000574776 EHFQ9NZC4 300 aa11.33□□□□□ -0.6
CTNS-209ENST00000574776 COMMD9Q9P000 198 aa11.33□□□□□ -0.6
CTNS-209ENST00000574776 UBQLN2Q9UHD9 624 aa11.33□□□□□ -0.6
CTNS-209ENST00000574776 NSG2Q9Y328 171 aa11.33□□□□□ -0.6
CTNS-209ENST00000574776 KRASP01116 189 aa11.32□□□□□ -0.6
CTNS-209ENST00000574776 PMP2P02689 132 aa11.32□□□□□ -0.6
CTNS-209ENST00000574776 RLN1P04808 185 aa11.32□□□□□ -0.6
CTNS-209ENST00000574776 FGF2P09038 288 aa11.32□□□□□ -0.6
CTNS-209ENST00000574776 F2RP25116 425 aa11.32□□□□□ -0.6
CTNS-209ENST00000574776 MFAP2P55001 183 aa11.32□□□□□ -0.6
CTNS-209ENST00000574776 ERVK-16P61578 105 aa11.32□□□□□ -0.6
CTNS-209ENST00000574776 THOC7Q6I9Y2 204 aaKnown RBP11.32□□□□□ -0.6
CTNS-209ENST00000574776 FCAMRQ8WWV6 532 aa11.32□□□□□ -0.6
CTNS-209ENST00000574776 TMEM190Q8WZ59 177 aa11.32□□□□□ -0.6
CTNS-209ENST00000574776 ZNF2Q9BSG1 426 aaPredicted RBP11.32□□□□□ -0.6
CTNS-209ENST00000574776 NDUFA4L2Q9NRX3 87 aa11.32□□□□□ -0.6
CTNS-209ENST00000574776 ALMS1Q8TCU4 4167 aa11.31□□□□□ -0.6
CTNS-209ENST00000574776 IGHV3OR16-8A0A075B7F1 116 aa11.31□□□□□ -0.6
CTNS-209ENST00000574776 A0A0J9YWU9 116 aa11.31□□□□□ -0.6
CTNS-209ENST00000574776 MARCH11A6NNE9 402 aa11.31□□□□□ -0.6
CTNS-209ENST00000574776 G6PCP35575 357 aa11.31□□□□□ -0.6
CTNS-209ENST00000574776 TGFBR1P36897 503 aa11.31□□□□□ -0.6
CTNS-209ENST00000574776 HSD17B13Q7Z5P4 300 aaPredicted RBP11.31□□□□□ -0.6
CTNS-209ENST00000574776 SCARB1Q8WTV0 552 aa11.31□□□□□ -0.6
CTNS-209ENST00000574776 BORCS5Q969J3 196 aa11.31□□□□□ -0.6
CTNS-209ENST00000574776 DGCR14Q96DF8 476 aaKnown RBP11.31□□□□□ -0.6
CTNS-209ENST00000574776 BSCL2Q96G97 398 aaPredicted RBP11.31□□□□□ -0.6
CTNS-209ENST00000574776 SPAG8Q99932 426 aaPredicted RBP11.31□□□□□ -0.6
CTNS-209ENST00000574776 CHRDL1Q9BU40 450 aa11.31□□□□□ -0.6
CTNS-209ENST00000574776 C20orf24Q9BUV8 137 aa11.31□□□□□ -0.6
CTNS-209ENST00000574776 OR51B2Q9Y5P1 312 aa11.31□□□□□ -0.6
CTNS-209ENST00000574776 TSPAN4O14817 238 aa11.3□□□□□ -0.6
CTNS-209ENST00000574776 SPRY2O43597 315 aa11.3□□□□□ -0.6
CTNS-209ENST00000574776 ZNF207O43670 478 aaKnown RBP11.3□□□□□ -0.6
CTNS-209ENST00000574776 SNAPC5O75971 98 aa11.3□□□□□ -0.6
CTNS-209ENST00000574776 APOC4P55056 127 aa11.3□□□□□ -0.6
CTNS-209ENST00000574776 EWSR1Q01844 656 aaKnown RBP eCLIP11.3□□□□□ -0.6
CTNS-209ENST00000574776 PMS2P11Q13670 270 aa11.3□□□□□ -0.6
CTNS-209ENST00000574776 LAMTOR1Q6IAA8 161 aa11.3□□□□□ -0.6
CTNS-209ENST00000574776 UBAC2Q8NBM4 344 aa11.3□□□□□ -0.6
CTNS-209ENST00000574776 LSM10Q969L4 123 aaKnown RBP11.3□□□□□ -0.6
CTNS-209ENST00000574776 MOB3AQ96BX8 217 aa11.3□□□□□ -0.6
CTNS-209ENST00000574776 DAZ1Q9NQZ3 744 aaKnown RBP11.3□□□□□ -0.6
CTNS-209ENST00000574776 C21orf62Q9NYP8 219 aa11.3□□□□□ -0.6
CTNS-209ENST00000574776 F11RQ9Y624 299 aaKnown RBP11.3□□□□□ -0.6
CTNS-209ENST00000574776 CXorf65A6NEN9 183 aa11.29□□□□□ -0.6
CTNS-209ENST00000574776 NDUFA4O00483 81 aa11.29□□□□□ -0.6
CTNS-209ENST00000574776 TMEM127O75204 238 aa11.29□□□□□ -0.6
CTNS-209ENST00000574776 ADMP35318 185 aa11.29□□□□□ -0.6
CTNS-209ENST00000574776 RPS19P39019 145 aaKnown RBP11.29□□□□□ -0.6
CTNS-209ENST00000574776 DEFB135Q30KP9 77 aa11.29□□□□□ -0.6
CTNS-209ENST00000574776 SPSB3Q6PJ21 355 aa11.29□□□□□ -0.6
CTNS-209ENST00000574776 Q6ZWC4 215 aa11.29□□□□□ -0.6
CTNS-209ENST00000574776 WFDC3Q8IUB2 231 aa11.29□□□□□ -0.6
CTNS-209ENST00000574776 LYSMD2Q8IV50 215 aa11.29□□□□□ -0.6
CTNS-209ENST00000574776 CMTM1Q8IZ96 169 aa11.29□□□□□ -0.6
CTNS-209ENST00000574776 TSPAN14Q8NG11 270 aa11.29□□□□□ -0.6
CTNS-209ENST00000574776 OR5H2Q8NGV7 314 aa11.29□□□□□ -0.6
CTNS-209ENST00000574776 OR6F1Q8NGZ6 308 aa11.29□□□□□ -0.6
CTNS-209ENST00000574776 F8W735 103 aaPredicted RBP11.28□□□□□ -0.6
CTNS-209ENST00000574776 K7EIM0 57 aa11.28□□□□□ -0.6
CTNS-209ENST00000574776 UBE2CO00762 179 aa11.28□□□□□ -0.6
CTNS-209ENST00000574776 LY6G6CO95867 125 aa11.28□□□□□ -0.6
CTNS-209ENST00000574776 RPL35AP18077 110 aaKnown RBP11.28□□□□□ -0.6
CTNS-209ENST00000574776 NAT1P18440 290 aa11.28□□□□□ -0.6
CTNS-209ENST00000574776 BMI1P35226 326 aa11.28□□□□□ -0.6
CTNS-209ENST00000574776 TAS2R20P59543 309 aa11.28□□□□□ -0.6
CTNS-209ENST00000574776 ODF3L2Q3SX64 289 aa11.28□□□□□ -0.6
CTNS-209ENST00000574776 Q56UQ5 140 aa11.28□□□□□ -0.6
CTNS-209ENST00000574776 UBE2NLQ5JXB2 153 aa11.28□□□□□ -0.6
CTNS-209ENST00000574776 TMEM69Q5SWH9 247 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms