RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 SPCS3P61009 180 aa19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 HSPE1P61604 102 aaKnown RBP19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 TUSC1Q2TAM9 212 aa19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 SSMEM1Q8WWF3 244 aa19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 UBQLN2Q9UHD9 624 aa19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 CDC42EP3Q9UKI2 254 aa19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 ZNF257Q9Y2Q1 563 aa19.11■□□□□ 0.65
ATPAF1-213ENST00000574428 HIVEP2P31629 2446 aa19.1■□□□□ 0.65
ATPAF1-213ENST00000574428 SYNGR2O43760 224 aa19.1■□□□□ 0.65
ATPAF1-213ENST00000574428 ACTL6BO94805 426 aa19.1■□□□□ 0.65
ATPAF1-213ENST00000574428 IAPPP10997 89 aa19.1■□□□□ 0.65
ATPAF1-213ENST00000574428 SRD5A1P18405 259 aa19.1■□□□□ 0.65
ATPAF1-213ENST00000574428 SSBP2P81877 361 aaPredicted RBP19.1■□□□□ 0.65
ATPAF1-213ENST00000574428 C5orf56Q8N8D9 126 aa19.1■□□□□ 0.65
ATPAF1-213ENST00000574428 OR52E5Q8NH55 327 aa19.1■□□□□ 0.65
ATPAF1-213ENST00000574428 OR5R1Q8NH85 324 aa19.1■□□□□ 0.65
ATPAF1-213ENST00000574428 RASL11BQ9BPW5 248 aa19.1■□□□□ 0.65
ATPAF1-213ENST00000574428 ZFP57Q9NU63 452 aa19.1■□□□□ 0.65
ATPAF1-213ENST00000574428 TNCP24821 2201 aa19.1■□□□□ 0.65
ATPAF1-213ENST00000574428 BTBD17A6NE02 478 aa19.09■□□□□ 0.65
ATPAF1-213ENST00000574428 SH2D7A6NKC9 451 aaPredicted RBP19.09■□□□□ 0.65
ATPAF1-213ENST00000574428 CEBPZOSA8MTT3 80 aa19.09■□□□□ 0.65
ATPAF1-213ENST00000574428 INAFM1C9JVW0 142 aa19.09■□□□□ 0.65
ATPAF1-213ENST00000574428 E7EUB6 86 aa19.09■□□□□ 0.65
ATPAF1-213ENST00000574428 BCL2L11O43521 198 aa19.09■□□□□ 0.65
ATPAF1-213ENST00000574428 OR5B3Q8NH48 314 aa19.09■□□□□ 0.65
ATPAF1-213ENST00000574428 KANTRA0A1W2PQU2 76 aa19.09■□□□□ 0.65
ATPAF1-213ENST00000574428 RLN2P04090 185 aa19.09■□□□□ 0.65
ATPAF1-213ENST00000574428 FGF2P09038 288 aa19.09■□□□□ 0.65
ATPAF1-213ENST00000574428 COMPP49747 757 aaPredicted RBP19.09■□□□□ 0.65
ATPAF1-213ENST00000574428 PDLIM3Q53GG5 364 aaPredicted RBP19.09■□□□□ 0.65
ATPAF1-213ENST00000574428 SLC51BQ86UW2 128 aa19.09■□□□□ 0.65
ATPAF1-213ENST00000574428 OR1L8Q8NGR8 309 aa19.09■□□□□ 0.65
ATPAF1-213ENST00000574428 A0A1B0GW64 132 aa19.08■□□□□ 0.64
ATPAF1-213ENST00000574428 MED6O75586 246 aa19.08■□□□□ 0.64
ATPAF1-213ENST00000574428 TMEM50AO95807 157 aa19.08■□□□□ 0.64
ATPAF1-213ENST00000574428 MAS1LP35410 378 aa19.08■□□□□ 0.64
ATPAF1-213ENST00000574428 DTD1Q8TEA8 209 aa19.08■□□□□ 0.64
ATPAF1-213ENST00000574428 VPREB3Q9UKI3 123 aa19.08■□□□□ 0.64
ATPAF1-213ENST00000574428 MSGN1A6NI15 193 aa19.07■□□□□ 0.64
ATPAF1-213ENST00000574428 CGB1A6NKQ9 187 aa19.07■□□□□ 0.64
ATPAF1-213ENST00000574428 CNIH1O95406 144 aa19.07■□□□□ 0.64
ATPAF1-213ENST00000574428 AMY1AP04745 511 aa19.07■□□□□ 0.64
ATPAF1-213ENST00000574428 HOXA1P49639 335 aaPredicted RBP19.07■□□□□ 0.64
ATPAF1-213ENST00000574428 PRCDQ00LT1 54 aa19.07■□□□□ 0.64
ATPAF1-213ENST00000574428 DUX5Q96PT3 197 aa19.07■□□□□ 0.64
ATPAF1-213ENST00000574428 C11orf1Q9H5F2 150 aa19.07■□□□□ 0.64
ATPAF1-213ENST00000574428 NDUFA4L2Q9NRX3 87 aa19.07■□□□□ 0.64
ATPAF1-213ENST00000574428 CACFD1Q9UGQ2 172 aa19.07■□□□□ 0.64
ATPAF1-213ENST00000574428 FGF16O43320 207 aa19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 RPL27AP46776 148 aaKnown RBP19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 RBMS3Q6XE24 437 aaKnown RBP19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 OR10W1Q8NGF6 305 aa19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 HSPB9Q9BQS6 159 aa19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 PLXNB1O43157 2135 aa19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 MTORP42345 2549 aa19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 H3BP45 60 aa19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 HLA-DRB1P01911 266 aa19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 PAX9P55771 341 aa19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 VAMP2P63027 116 aa19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 CX3CL1P78423 397 aa19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 SCGB2A2Q13296 93 aa19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 SRSF12Q8WXF0 261 aaKnown RBP19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 AQP10Q96PS8 301 aa19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 RAB40CQ96S21 281 aa19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 PLEKHA3Q9HB20 300 aa19.06■□□□□ 0.64
ATPAF1-213ENST00000574428 PVALBP20472 110 aaPredicted RBP19.05■□□□□ 0.64
ATPAF1-213ENST00000574428 NUP62P37198 522 aaPredicted RBP19.05■□□□□ 0.64
ATPAF1-213ENST00000574428 UBA52P62987 128 aaKnown RBP19.05■□□□□ 0.64
ATPAF1-213ENST00000574428 NDPQ00604 133 aa19.05■□□□□ 0.64
ATPAF1-213ENST00000574428 FXYD3Q14802 87 aa19.05■□□□□ 0.64
ATPAF1-213ENST00000574428 C16orf82Q7Z2V1 217 aa19.05■□□□□ 0.64
ATPAF1-213ENST00000574428 ARPC5LQ9BPX5 153 aa19.05■□□□□ 0.64
ATPAF1-213ENST00000574428 IGHV7-81A0A0B4J1V7 117 aa19.04■□□□□ 0.64
ATPAF1-213ENST00000574428 RPS10-NUDT3A0A1W2PQS6 291 aa19.04■□□□□ 0.64
ATPAF1-213ENST00000574428 E5RGE8 158 aa19.04■□□□□ 0.64
ATPAF1-213ENST00000574428 APELAP0DMC3 54 aa19.04■□□□□ 0.64
ATPAF1-213ENST00000574428 VDAC2P45880 294 aaPredicted RBP19.04■□□□□ 0.64
ATPAF1-213ENST00000574428 ALKAL2Q6UX46 152 aa19.04■□□□□ 0.64
ATPAF1-213ENST00000574428 ZNF562Q6V9R5 426 aa19.04■□□□□ 0.64
ATPAF1-213ENST00000574428 HEYLQ9NQ87 328 aaPredicted RBP19.04■□□□□ 0.64
ATPAF1-213ENST00000574428 ST8SIA2Q92186 375 aa19.04■□□□□ 0.64
ATPAF1-213ENST00000574428 FAM103A1Q9BTL3 118 aaKnown RBP19.04■□□□□ 0.64
ATPAF1-213ENST00000574428 ENY2Q9NPA8 101 aa19.04■□□□□ 0.64
ATPAF1-213ENST00000574428 F8P00451 2351 aa19.03■□□□□ 0.64
ATPAF1-213ENST00000574428 M0QZK8 103 aa19.03■□□□□ 0.64
ATPAF1-213ENST00000574428 CAV2P51636 162 aa19.03■□□□□ 0.64
ATPAF1-213ENST00000574428 ABHD5Q8WTS1 349 aa19.03■□□□□ 0.64
ATPAF1-213ENST00000574428 PCNPQ8WW12 178 aaKnown RBP19.03■□□□□ 0.64
ATPAF1-213ENST00000574428 ARPC1AQ92747 370 aa19.03■□□□□ 0.64
ATPAF1-213ENST00000574428 SMIM8Q96KF7 97 aa19.03■□□□□ 0.64
ATPAF1-213ENST00000574428 ZNF471Q9BX82 626 aaPredicted RBP19.03■□□□□ 0.64
ATPAF1-213ENST00000574428 PSENENQ9NZ42 101 aa19.03■□□□□ 0.64
ATPAF1-213ENST00000574428 NSD1Q96L73 2696 aaPredicted RBP19.02■□□□□ 0.64
ATPAF1-213ENST00000574428 DNAJC9-AS1A6NH13 148 aa19.02■□□□□ 0.64
ATPAF1-213ENST00000574428 TEX22C9J3V5 150 aa19.02■□□□□ 0.64
ATPAF1-213ENST00000574428 HKR1P10072 659 aa19.02■□□□□ 0.64
ATPAF1-213ENST00000574428 CLLU1Q5K131 121 aa19.02■□□□□ 0.64
ATPAF1-213ENST00000574428 SCARB1Q8WTV0 552 aa19.02■□□□□ 0.64
ATPAF1-213ENST00000574428 HIPK2Q9H2X6 1198 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms