RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 MLLT11Q13015 90 aaPredicted RBP14.5□□□□□ -0.09
CCDC40-206ENST00000572083 SLC25A24Q6NUK1 477 aa14.5□□□□□ -0.09
CCDC40-206ENST00000572083 CNIH2Q6PI25 160 aa14.5□□□□□ -0.09
CCDC40-206ENST00000572083 SPSB3Q6PJ21 355 aa14.5□□□□□ -0.09
CCDC40-206ENST00000572083 SPAG16Q8N0X2 631 aa14.5□□□□□ -0.09
CCDC40-206ENST00000572083 SECTM1Q8WVN6 248 aa14.5□□□□□ -0.09
CCDC40-206ENST00000572083 QTRT1Q9BXR0 403 aaKnown RBP14.5□□□□□ -0.09
CCDC40-206ENST00000572083 SCN3BQ9NY72 215 aa14.5□□□□□ -0.09
CCDC40-206ENST00000572083 IGHV3-49A0A0A0MS15 119 aa14.49□□□□□ -0.09
CCDC40-206ENST00000572083 F8W735 103 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-206ENST00000572083 UPK2O00526 184 aa14.49□□□□□ -0.09
CCDC40-206ENST00000572083 PDCD5O14737 125 aa14.49□□□□□ -0.09
CCDC40-206ENST00000572083 ADMP35318 185 aa14.49□□□□□ -0.09
CCDC40-206ENST00000572083 HACD4Q5VWC8 232 aa14.49□□□□□ -0.09
CCDC40-206ENST00000572083 SRSF8Q9BRL6 282 aaKnown RBP14.49□□□□□ -0.09
CCDC40-206ENST00000572083 ACOT13Q9NPJ3 140 aa14.49□□□□□ -0.09
CCDC40-206ENST00000572083 CCL28Q9NRJ3 127 aa14.49□□□□□ -0.09
CCDC40-206ENST00000572083 ETV7Q9Y603 341 aa14.49□□□□□ -0.09
CCDC40-206ENST00000572083 TMEM235A6NFC5 223 aa14.48□□□□□ -0.09
CCDC40-206ENST00000572083 K7EMT4 169 aa14.48□□□□□ -0.09
CCDC40-206ENST00000572083 SULT1C2O00338 296 aa14.48□□□□□ -0.09
CCDC40-206ENST00000572083 CYB5BO43169 146 aa14.48□□□□□ -0.09
CCDC40-206ENST00000572083 OR13C7P0DN81 318 aa14.48□□□□□ -0.09
CCDC40-206ENST00000572083 WT1-ASQ06250 92 aa14.48□□□□□ -0.09
CCDC40-206ENST00000572083 ARL6IP1Q15041 203 aa14.48□□□□□ -0.09
CCDC40-206ENST00000572083 RCN1Q15293 331 aa14.48□□□□□ -0.09
CCDC40-206ENST00000572083 AIFM2Q9BRQ8 373 aa14.48□□□□□ -0.09
CCDC40-206ENST00000572083 RHPN1-AS1Q9BWJ2 59 aa14.48□□□□□ -0.09
CCDC40-206ENST00000572083 DCSTAMPQ9H295 470 aa14.48□□□□□ -0.09
CCDC40-206ENST00000572083 TMEM140Q9NV12 185 aa14.48□□□□□ -0.09
CCDC40-206ENST00000572083 C21orf62Q9NYP8 219 aa14.48□□□□□ -0.09
CCDC40-206ENST00000572083 SMPXQ9UHP9 88 aa14.48□□□□□ -0.09
CCDC40-206ENST00000572083 IGHV7-4-1A0A0J9YVY3 117 aa14.47□□□□□ -0.09
CCDC40-206ENST00000572083 C15orf62A8K5M9 175 aa14.47□□□□□ -0.09
CCDC40-206ENST00000572083 C11orf94C9JXX5 98 aa14.47□□□□□ -0.09
CCDC40-206ENST00000572083 SERPINE2P07093 398 aa14.47□□□□□ -0.09
CCDC40-206ENST00000572083 TAS2R31P59538 309 aa14.47□□□□□ -0.09
CCDC40-206ENST00000572083 TMEM187Q14656 261 aa14.47□□□□□ -0.09
CCDC40-206ENST00000572083 Q56UQ5 140 aa14.47□□□□□ -0.09
CCDC40-206ENST00000572083 GBGT1Q8N5D6 347 aa14.47□□□□□ -0.09
CCDC40-206ENST00000572083 ANXA10Q9UJ72 324 aa14.47□□□□□ -0.09
CCDC40-206ENST00000572083 SMIM30A4D0T7 59 aa14.46□□□□□ -0.09
CCDC40-206ENST00000572083 CHEK1O14757 476 aa14.46□□□□□ -0.09
CCDC40-206ENST00000572083 NQO2P16083 231 aa14.46□□□□□ -0.09
CCDC40-206ENST00000572083 OGFRL1Q5TC84 451 aaPredicted RBP14.46□□□□□ -0.09
CCDC40-206ENST00000572083 Q8NAQ8 132 aa14.46□□□□□ -0.09
CCDC40-206ENST00000572083 TMEM116Q8NCL8 245 aa14.46□□□□□ -0.09
CCDC40-206ENST00000572083 DMBX1Q8NFW5 382 aa14.46□□□□□ -0.09
CCDC40-206ENST00000572083 SCARB1Q8WTV0 552 aa14.46□□□□□ -0.09
CCDC40-206ENST00000572083 ZNF414Q96IQ9 312 aa14.46□□□□□ -0.09
CCDC40-206ENST00000572083 MGLLQ99685 303 aa14.46□□□□□ -0.09
CCDC40-206ENST00000572083 IGHV3OR16-13A0A075B7E8 117 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 IGHV3-74A0A0B4J1X5 117 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 TRAV1-2A0A0B4J238 106 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 RBFOX2O43251 390 aaKnown RBP eCLIP14.45□□□□□ -0.1
CCDC40-206ENST00000572083 RGS10O43665 173 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 SSX5O60225 188 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 MRPS14O60783 128 aaKnown RBP14.45□□□□□ -0.1
CCDC40-206ENST00000572083 HPRT1P00492 218 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 TRAPPC2P0DI81 140 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 TRAPPC2BP0DI82 140 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 PTHLHP12272 177 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 RAB3BP20337 219 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 CMC4P56277 68 aaPredicted RBP14.45□□□□□ -0.1
CCDC40-206ENST00000572083 GNG2P59768 71 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 POU2AF1Q16633 256 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 ZNF773Q6PK81 442 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 NR2C2APQ86WQ0 139 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 OR13F1Q8NGS4 319 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 MUC4Q99102 2169 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 HINT2Q9BX68 163 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 CCDC90BQ9GZT6 254 aa14.45□□□□□ -0.1
CCDC40-206ENST00000572083 F11RQ9Y624 299 aaKnown RBP14.45□□□□□ -0.1
CCDC40-206ENST00000572083 IGHV4-4A0A075B6R2 117 aa14.44□□□□□ -0.1
CCDC40-206ENST00000572083 TEX50A0A1B0GTY4 177 aa14.44□□□□□ -0.1
CCDC40-206ENST00000572083 PRSS29PA6NIE9 313 aa14.44□□□□□ -0.1
CCDC40-206ENST00000572083 K7EIM0 57 aa14.44□□□□□ -0.1
CCDC40-206ENST00000572083 MYL9P24844 172 aa14.44□□□□□ -0.1
CCDC40-206ENST00000572083 FCGR2CP31995 323 aa14.44□□□□□ -0.1
CCDC40-206ENST00000572083 ARPC4P59998 168 aa14.44□□□□□ -0.1
CCDC40-206ENST00000572083 Q6ZTC4 211 aa14.44□□□□□ -0.1
CCDC40-206ENST00000572083 OR51H1Q8NH63 302 aa14.44□□□□□ -0.1
CCDC40-206ENST00000572083 HRH4Q9H3N8 390 aa14.44□□□□□ -0.1
CCDC40-206ENST00000572083 TPRKBQ9Y3C4 175 aa14.44□□□□□ -0.1
CCDC40-206ENST00000572083 HSPG2P98160 4391 aa14.43□□□□□ -0.1
CCDC40-206ENST00000572083 YIF1AO95070 293 aa14.43□□□□□ -0.1
CCDC40-206ENST00000572083 CTSGP08311 255 aa14.43□□□□□ -0.1
CCDC40-206ENST00000572083 HLA-DMBP28068 263 aa14.43□□□□□ -0.1
CCDC40-206ENST00000572083 CATR1Q13166 79 aa14.43□□□□□ -0.1
CCDC40-206ENST00000572083 MSMO1Q15800 293 aa14.43□□□□□ -0.1
CCDC40-206ENST00000572083 LEMD1Q68G75 181 aa14.43□□□□□ -0.1
CCDC40-206ENST00000572083 THOC7Q6I9Y2 204 aaKnown RBP14.43□□□□□ -0.1
CCDC40-206ENST00000572083 ATP6V0BQ99437 205 aa14.43□□□□□ -0.1
CCDC40-206ENST00000572083 DUSP21Q9H596 190 aa14.43□□□□□ -0.1
CCDC40-206ENST00000572083 IGHV4-28A0A0C4DH34 117 aa14.42□□□□□ -0.1
CCDC40-206ENST00000572083 C15orf61A6NNL5 157 aa14.42□□□□□ -0.1
CCDC40-206ENST00000572083 PPYP01298 95 aa14.42□□□□□ -0.1
CCDC40-206ENST00000572083 RBMY1A1P0DJD3 496 aaKnown RBP14.42□□□□□ -0.1
CCDC40-206ENST00000572083 RBMY1CP0DJD4 496 aa14.42□□□□□ -0.1
CCDC40-206ENST00000572083 FXYD4P59646 89 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms