RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 GUCA2BQ16661 112 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 SPSB3Q6PJ21 355 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 PLET1Q6UQ28 207 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 OR5B3Q8NH48 314 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 AP3S1Q92572 193 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 DGCR14Q96DF8 476 aaKnown RBP7.37□□□□□ -1.23
CIITA-207ENST00000571545 YIPF6Q96EC8 236 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 BSCL2Q96G97 398 aaPredicted RBP7.37□□□□□ -1.23
CIITA-207ENST00000571545 TMEM56Q96MV1 263 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 PRNDQ9UKY0 176 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 A0A1B0GW64 132 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 MEIS3P1A6NDR6 274 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 E7EUB6 86 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 PGLYRP1O75594 196 aaPredicted RBP7.36□□□□□ -1.23
CIITA-207ENST00000571545 REG1AP05451 166 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 CLEC3BP05452 202 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 PTHLHP12272 177 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 RCVRNP35243 200 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 HRH1P35367 487 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 RPS19P39019 145 aaKnown RBP7.36□□□□□ -1.23
CIITA-207ENST00000571545 RFX2P48378 723 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 MZT2AQ6P582 158 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 ZNF502Q8TBZ5 544 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 C15orf40Q8WUR7 153 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 GPHA2Q96T91 129 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 SRD5A3Q9H8P0 318 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 EDA2RQ9HAV5 297 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 PLEKHA3Q9HB20 300 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 MRPL27Q9P0M9 148 aaKnown RBP7.36□□□□□ -1.23
CIITA-207ENST00000571545 DMRT1Q9Y5R6 373 aa7.36□□□□□ -1.23
CIITA-207ENST00000571545 TMEM213A2RRL7 107 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 IZUMO1RA6ND01 250 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 MFSD2BA6NFX1 497 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 OR11H12B2RN74 326 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 TGOLN2O43493 480 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 ATG12O94817 140 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 IGHV3-23P01764 117 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 HLA-AP01891 365 aaKnown RBP7.35□□□□□ -1.23
CIITA-207ENST00000571545 PMP2P02689 132 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 FCER2P06734 321 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 SERPINE2P07093 398 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 OR13C7P0DN81 318 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 GPR183P32249 361 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 LSM3P62310 102 aaKnown RBP7.35□□□□□ -1.23
CIITA-207ENST00000571545 RBPMS2Q6ZRY4 209 aaKnown RBP7.35□□□□□ -1.23
CIITA-207ENST00000571545 SLC38A6Q8IZM9 456 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 OR52B4Q8NGK2 314 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 DAZ1Q9NQZ3 744 aaKnown RBP7.35□□□□□ -1.23
CIITA-207ENST00000571545 OR51B2Q9Y5P1 312 aa7.35□□□□□ -1.23
CIITA-207ENST00000571545 F11RQ9Y624 299 aaKnown RBP7.35□□□□□ -1.23
CIITA-207ENST00000571545 CGB1A6NKQ9 187 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 ZNF785A8K8V0 405 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 NDUFA4O00483 81 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 KRASP01116 189 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 RPA2P15927 270 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 TBPP20226 339 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 HLA-DMAP28067 261 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 LPAR6P43657 344 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 RORCP51449 518 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 UCP3P55916 312 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 RELQ04864 619 aaPredicted RBP7.34□□□□□ -1.23
CIITA-207ENST00000571545 SLC25A24Q6NUK1 477 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 ADAMTSL5Q6ZMM2 481 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 LINC00322Q6ZN03 302 aaPredicted RBP7.34□□□□□ -1.23
CIITA-207ENST00000571545 C19orf35Q6ZS72 473 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 TMEM61Q8N0U2 210 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 UXS1Q8NBZ7 420 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 GPX8Q8TED1 209 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 FCAMRQ8WWV6 532 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 TMEM190Q8WZ59 177 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 WDR89Q96FK6 387 aaPredicted RBP7.34□□□□□ -1.23
CIITA-207ENST00000571545 ZNF486Q96H40 463 aaPredicted RBP7.34□□□□□ -1.23
CIITA-207ENST00000571545 SPAG8Q99932 426 aaPredicted RBP7.34□□□□□ -1.23
CIITA-207ENST00000571545 FUNDC2Q9BWH2 189 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 ZNF436Q9C0F3 470 aaPredicted RBP7.34□□□□□ -1.23
CIITA-207ENST00000571545 FXYD6Q9H0Q3 95 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 HIPK2Q9H2X6 1198 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 NDUFA4L2Q9NRX3 87 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 C21orf62Q9NYP8 219 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 COMMD3Q9UBI1 195 aa7.34□□□□□ -1.23
CIITA-207ENST00000571545 TRAV3A0A0B4J244 114 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 TEX50A0A1B0GTY4 177 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 C15orf61A6NNL5 157 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 EIF4EP06730 217 aaKnown RBP7.33□□□□□ -1.24
CIITA-207ENST00000571545 CD7P09564 240 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 C8orf88P0DMB2 117 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 BMI1P35226 326 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 G6PCP35575 357 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 TGFBR1P36897 503 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 WT1-ASQ06250 92 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 LAMTOR1Q6IAA8 161 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 BTNL8Q6UX41 500 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 H2BFWTQ7Z2G1 175 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 OR1P1Q8NH06 330 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 OR4A16Q8NH70 328 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 GGTLC1Q9BX51 225 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 HINT2Q9BX68 163 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 C5orf66Q9H5L9 145 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 TMEM14BQ9NUH8 114 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 MLXQ9UH92 298 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms