RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 TAS2R31P59538 309 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 GABARAPL2P60520 117 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 WT1-ASQ06250 92 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 KLK9Q2XQG4 91 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 SLC38A6Q8IZM9 456 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 ZBTB34Q8NCN2 500 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 OR5B3Q8NH48 314 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 TMEM190Q8WZ59 177 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 MARC2Q969Z3 335 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 AIFM2Q9BRQ8 373 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 CHRDL1Q9BU40 450 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 C5orf66Q9H5L9 145 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 AUNIPQ9H7T9 357 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 KLK9Q9UKQ9 250 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 RAB26Q9ULW5 256 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 IGKV3-7A0A075B6H7 116 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 RBFOX2O43251 390 aaKnown RBP eCLIP6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 KRASP01116 189 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 PMP2P02689 132 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 RLN1P04808 185 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 SERPINE2P07093 398 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 GNRHRP30968 328 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 BMI1P35226 326 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 G6PCP35575 357 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 LPAR6P43657 344 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 TFPI2P48307 235 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 RFX2P48378 723 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 APOC4P55056 127 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 ELLP55199 621 aaPredicted RBP6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 HERV-K104P61576 105 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 ERVK-16P61578 105 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 MSMO1Q15800 293 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 ZNF124Q15973 351 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 POU2AF1Q16633 256 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 ODF3L2Q3SX64 289 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 Q56UQ5 140 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 CEMP1Q6PRD7 247 aaPredicted RBP6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 APRG1Q8IVJ8 170 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 STPG3Q8N7X2 389 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 GDPD1Q8N9F7 314 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 VN1R17PQ8TDU5 208 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 GIMAP1Q8WWP7 306 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 FCAMRQ8WWV6 532 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 SPAG8Q99932 426 aaPredicted RBP6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 ZNF436Q9C0F3 470 aaPredicted RBP6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 PLEKHA2Q9HB19 425 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 DAZ1Q9NQZ3 744 aaKnown RBP6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 DIABLOQ9NR28 239 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 EHFQ9NZC4 300 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 THYN1Q9P016 225 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 ETV7Q9Y603 341 aa6.38□□□□□ -1.39
CTDNEP1-203ENST00000570385 IGHV3OR16-13A0A075B7E8 117 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 IGHV3-74A0A0B4J1X5 117 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 NUPR2A6NF83 97 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 DBX1A6NMT0 343 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 MARCH11A6NNE9 402 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 TSPAN4O14817 238 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 MRPS14O60783 128 aaKnown RBP6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 PGLYRP1O75594 196 aaPredicted RBP6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 IGHV3-48P01763 117 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 CTSDP07339 412 aaPredicted RBP6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 FCGR2BP31994 310 aaPredicted RBP6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 ADMP35318 185 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 TGFBR1P36897 503 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 NEDD8Q15843 81 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 LAMTOR1Q6IAA8 161 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 Q6ZWC4 215 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 RPP25LQ8N5L8 163 aaKnown RBP6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 OR5AP2Q8NGF4 316 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 OR1L8Q8NGR8 309 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 SCARB1Q8WTV0 552 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 FCGR1BQ92637 280 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 BSCL2Q96G97 398 aaPredicted RBP6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 SRSF8Q9BRL6 282 aaKnown RBP6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 ZNF2Q9BSG1 426 aaPredicted RBP6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 IFT46Q9NQC8 304 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 C21orf62Q9NYP8 219 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 OR51B2Q9Y5P1 312 aa6.37□□□□□ -1.39
CTDNEP1-203ENST00000570385 F8W735 103 aaPredicted RBP6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 K7EIM0 57 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 NDUFA4O00483 81 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 CYB5BO43169 146 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 DEDDO75618 318 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 SNAPC5O75971 98 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 YIF1AO95070 293 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 F2RP25116 425 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 TNFRSF9Q07011 255 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 PHLDA2Q53GA4 152 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 WFDC3Q8IUB2 231 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 GBGT1Q8N5D6 347 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 TSPAN14Q8NG11 270 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 CD300LFQ8TDQ1 290 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 LSM10Q969L4 123 aaKnown RBP6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 RNF183Q96D59 192 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 DGCR14Q96DF8 476 aaKnown RBP6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 MISP3Q96FF7 219 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 RNF2Q99496 336 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 NDUFA4L2Q9NRX3 87 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 COMMD9Q9P000 198 aa6.36□□□□□ -1.39
CTDNEP1-203ENST00000570385 F11RQ9Y624 299 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms