RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PRSS54Q6PEW0 395 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 GRPEL2Q8TAA5 225 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 SRSF12Q8WXF0 261 aaKnown RBP12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 ARPC1AQ92747 370 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 OR5AC2Q9NZP5 309 aa12.23□□□□□ -0.45
HERPUD1-219ENST00000570273 ZFHX3Q15911 3703 aa12.22□□□□□ -0.45
HERPUD1-219ENST00000570273 IGHV7-81A0A0B4J1V7 117 aa12.22□□□□□ -0.45
HERPUD1-219ENST00000570273 AMY1AP04745 511 aa12.22□□□□□ -0.45
HERPUD1-219ENST00000570273 SSBP2P81877 361 aaPredicted RBP12.22□□□□□ -0.45
HERPUD1-219ENST00000570273 NDPQ00604 133 aa12.22□□□□□ -0.45
HERPUD1-219ENST00000570273 DCUN1D4Q92564 292 aa12.22□□□□□ -0.45
HERPUD1-219ENST00000570273 RAB40CQ96S21 281 aa12.22□□□□□ -0.45
HERPUD1-219ENST00000570273 HSPB9Q9BQS6 159 aa12.22□□□□□ -0.45
HERPUD1-219ENST00000570273 NDUFA4L2Q9NRX3 87 aa12.22□□□□□ -0.45
HERPUD1-219ENST00000570273 FN1P02751 2386 aaKnown RBP12.22□□□□□ -0.45
HERPUD1-219ENST00000570273 A0A1W2PN81 502 aa12.21□□□□□ -0.45
HERPUD1-219ENST00000570273 CGB1A6NKQ9 187 aa12.21□□□□□ -0.45
HERPUD1-219ENST00000570273 E5RGE8 158 aa12.21□□□□□ -0.45
HERPUD1-219ENST00000570273 GPR137BO60478 399 aa12.21□□□□□ -0.45
HERPUD1-219ENST00000570273 C1QBP02746 253 aa12.21□□□□□ -0.45
HERPUD1-219ENST00000570273 FAM157CP0CG43 387 aa12.21□□□□□ -0.45
HERPUD1-219ENST00000570273 SLC25A4P12235 298 aa12.21□□□□□ -0.45
HERPUD1-219ENST00000570273 CHRNA7P36544 502 aa12.21□□□□□ -0.45
HERPUD1-219ENST00000570273 ZNF562Q6V9R5 426 aa12.21□□□□□ -0.45
HERPUD1-219ENST00000570273 MRPL41Q8IXM3 137 aaKnown RBP12.21□□□□□ -0.45
HERPUD1-219ENST00000570273 CIB3Q96Q77 187 aaPredicted RBP12.21□□□□□ -0.45
HERPUD1-219ENST00000570273 RNF126Q9BV68 326 aa12.21□□□□□ -0.45
HERPUD1-219ENST00000570273 HEYLQ9NQ87 328 aaPredicted RBP12.21□□□□□ -0.45
HERPUD1-219ENST00000570273 PARP11Q9NR21 331 aa12.21□□□□□ -0.45
HERPUD1-219ENST00000570273 SETD2Q9BYW2 2564 aaPredicted RBP12.21□□□□□ -0.46
HERPUD1-219ENST00000570273 A0A1B0GW64 132 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 E7EUB6 86 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 CRLF1O75462 422 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 VDAC2P45880 294 aaPredicted RBP12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 RPL23AP62750 156 aaKnown RBP12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 OR10W1Q8NGF6 305 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 FAM103A1Q9BTL3 118 aaKnown RBP12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 HIPK2Q9H2X6 1198 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 C11orf1Q9H5F2 150 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 ESM1Q9NQ30 184 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 MSGN1A6NI15 193 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 TEX22C9J3V5 150 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 H3BP45 60 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 BOLA2-SMG1P6H3BVE0 249 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 LY86O95711 162 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 TMEM50AO95807 157 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 APELAP0DMC3 54 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 LYL1P12980 280 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 OR11H4Q8NGC9 324 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 SMIM8Q96KF7 97 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 NPFFR1Q9GZQ6 430 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 PSENENQ9NZ42 101 aa12.2□□□□□ -0.46
HERPUD1-219ENST00000570273 TNCP24821 2201 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 IGLC7A0M8Q6 106 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 CLDN34H7C241 214 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 ATP6V0E1O15342 81 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 KCNAB3O43448 404 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 HNRNPCP07910 306 aaKnown RBP eCLIP12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 OR13C7P0DN81 318 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 CAV2P51636 162 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 PAX9P55771 341 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 TAS2R30P59541 319 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 HILS1P60008 231 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 BLCAPP62952 87 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 SLC35E3Q7Z769 313 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 JMJD8Q96S16 334 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 SRSF8Q9BRL6 282 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 PAIP2BQ9ULR5 123 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 FBXO7Q9Y3I1 522 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 WSB1Q9Y6I7 421 aa12.19□□□□□ -0.46
HERPUD1-219ENST00000570273 TSC22D2O75157 780 aa12.18□□□□□ -0.46
HERPUD1-219ENST00000570273 REG1AP05451 166 aa12.18□□□□□ -0.46
HERPUD1-219ENST00000570273 AREGP15514 252 aa12.18□□□□□ -0.46
HERPUD1-219ENST00000570273 NUP62P37198 522 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-219ENST00000570273 P2RY1P47900 373 aa12.18□□□□□ -0.46
HERPUD1-219ENST00000570273 ERHP84090 104 aaKnown RBP12.18□□□□□ -0.46
HERPUD1-219ENST00000570273 WT1-ASQ06250 92 aa12.18□□□□□ -0.46
HERPUD1-219ENST00000570273 ECSCRQ19T08 205 aa12.18□□□□□ -0.46
HERPUD1-219ENST00000570273 SPANXN5Q5MJ07 72 aa12.18□□□□□ -0.46
HERPUD1-219ENST00000570273 HSD17B13Q7Z5P4 300 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-219ENST00000570273 ZNF546Q86UE3 836 aa12.18□□□□□ -0.46
HERPUD1-219ENST00000570273 NOXA1Q86UR1 476 aa12.18□□□□□ -0.46
HERPUD1-219ENST00000570273 OR4C12Q96R67 309 aa12.18□□□□□ -0.46
HERPUD1-219ENST00000570273 LYRM2Q9NU23 88 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-219ENST00000570273 FAM24AA6NFZ4 105 aa12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 INS-IGF2F8WCM5 200 aa12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 TRIM77I1YAP6 450 aa12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 ARPC5O15511 151 aa12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 IFNA10P01566 189 aa12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 IGHG2P01859 326 aa12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 UBA52P62987 128 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 RPP30P78346 268 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 TMEM267Q0VDI3 215 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 ARSJQ5FYB0 599 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 TET2Q6N021 2002 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 OR2C3Q8N628 320 aa12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 SLC24A4Q8NFF2 622 aa12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 PPP1R14BQ96C90 147 aa12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 HYLS1Q96M11 299 aa12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 PRSS22Q9GZN4 317 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms