RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 CCL3L1P16619 93 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 AGAP20933 346 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 IL3RAP26951 378 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 RPL29P47914 159 aaKnown RBP4.37□□□□□ -1.71
SF3B3-213ENST00000569687 PSMB3P49720 205 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 PRRX1P54821 245 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 PRCDQ00LT1 54 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 PNRC1Q12796 327 aaPredicted RBP4.37□□□□□ -1.71
SF3B3-213ENST00000569687 C2orf83Q53S99 150 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 AWAT1Q58HT5 328 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 FFAR4Q5NUL3 377 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 FAM90A2PQ658T7 463 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 PVRIGQ6DKI7 326 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 LCN15Q6UWW0 184 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 TREML4Q6UXN2 200 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 SSX9Q7RTT3 188 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 SSX7Q7RTT5 188 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 PDPNQ86YL7 162 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 CBLN2Q8IUK8 224 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 CYB561D1Q8N8Q1 229 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 BEND2Q8NDZ0 799 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 OR4C13Q8NGP0 309 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 OR1L8Q8NGR8 309 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 VSTM2AQ8TAG5 236 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 TMEM167AQ8TBQ9 72 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 RXFP4Q8TDU9 374 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 NEU4Q8WWR8 484 aaPredicted RBP4.37□□□□□ -1.71
SF3B3-213ENST00000569687 CACNG8Q8WXS5 425 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 FLYWCH2Q96CP2 140 aaKnown RBP4.37□□□□□ -1.71
SF3B3-213ENST00000569687 MALSU1Q96EH3 234 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 TVP23CQ96ET8 276 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 YPEL4Q96NS1 127 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 RNF5Q99942 180 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 TXNDC17Q9BRA2 123 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 RAB1BQ9H0U4 201 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 TMEM133Q9H2Q1 129 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 ENY2Q9NPA8 101 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 RPS10P5Q9NQ39 176 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 MANBALQ9NQG1 85 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 SIRT7Q9NRC8 400 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 NDUFA4L2Q9NRX3 87 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 KCNIP2Q9NS61 270 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 GNG13Q9P2W3 67 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 MIOXQ9UGB7 285 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 RELNP78509 3460 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 KALRNO60229 2985 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 A0A1B0GV50 99 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 M0R036 132 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 YIF1AO95070 293 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 CA2P00918 260 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 IGLV2-23P01705 113 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 IGKV1-16P04430 117 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 IFNA4P05014 189 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 CRYGBP07316 175 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 SNRNP70P08621 437 aaKnown RBP4.36□□□□□ -1.71
SF3B3-213ENST00000569687 CTRB1P17538 263 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 USF1P22415 310 aaPredicted RBP4.36□□□□□ -1.71
SF3B3-213ENST00000569687 NPY1RP25929 384 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 GNG10P50151 68 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 RAB13P51153 203 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 CD81P60033 236 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 ERVFRD-1P60508 538 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 ERHP84090 104 aaKnown RBP4.36□□□□□ -1.71
SF3B3-213ENST00000569687 RAB31Q13636 194 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 CDSNQ15517 529 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 SPINK9Q5DT21 86 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 AVPI1Q5T686 147 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 WDR25Q64LD2 544 aaPredicted RBP4.36□□□□□ -1.71
SF3B3-213ENST00000569687 CTRB2Q6GPI1 263 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 C11orf71Q6IPW1 123 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 TEPPQ6URK8 271 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 C1orf122Q6ZSJ8 110 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 TMEM144Q7Z5S9 345 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 C1QL4Q86Z23 238 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 PNKDQ8N490 385 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 TEX45Q8NA69 505 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 SLC24A4Q8NFF2 622 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 OR10X1Q8NGY0 326 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 RAB24Q969Q5 203 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 HIST1H2BAQ96A08 127 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 MGST2Q99735 147 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 NIPSNAP3BQ9BS92 247 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 C19orf24Q9BVV8 132 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 MRPL20Q9BYC9 149 aaKnown RBP4.36□□□□□ -1.71
SF3B3-213ENST00000569687 CTDSP1Q9GZU7 261 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 C7orf69Q9H7B7 122 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 PLEKHA3Q9HB20 300 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 SDF2L1Q9HCN8 221 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 CBLN4Q9NTU7 201 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 SLC45A2Q9UMX9 530 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 WASHC3Q9Y3C0 194 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 PUS1Q9Y606 427 aaKnown RBP eCLIP4.36□□□□□ -1.71
SF3B3-213ENST00000569687 DSCAML1Q8TD84 2053 aa4.36□□□□□ -1.71
SF3B3-213ENST00000569687 ICE1Q9Y2F5 2266 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 PKD1L2Q7Z442 2459 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 A0A1W2PN81 502 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 hCG_1809904A0A1W2PP81 198 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 A0A1W2PPE2 198 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 A0A1W2PR64 198 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 A0A1W2PRV1 198 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms