RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 GREB1Q4ZG55 1949 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 RTTNQ86VV8 2226 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 DENND4BO75064 1496 aaPredicted RBP0.73□□□□□ -2.29
BBS4-215ENST00000569001 PIK3C2GO75747 1445 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 CAMSAP1Q5T5Y3 1602 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 GBF1Q92538 1859 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 DOCK5Q9H7D0 1870 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 TMSB15BA0A087X1C1 80 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 TGIF2-C20orf24A0A0A6YYL0 155 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 IGHV1-18A0A0C4DH31 117 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 A0A0J9YY10 115 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 A0A1B0GX78 115 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 IRGMA1A4Y4 181 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 OR51F1A6NGY5 319 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 SMIM9A6NGZ8 99 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 ZNF705FA8MVS1 300 aaPredicted RBP0.72□□□□□ -2.29
BBS4-215ENST00000569001 TMEM114B3SHH9 223 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 FNDC10F2Z333 226 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 F8W036 122 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 H7C2G1 150 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 KLRC4O43908 158 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 CREBL2O60519 120 aaPredicted RBP0.72□□□□□ -2.29
BBS4-215ENST00000569001 LYPLA2O95372 231 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 IGKV1-5P01602 117 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 IGHV3-7P01780 117 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 HLA-DRB1P01911 266 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 SERPINA7P05543 415 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 PEBP1P30086 187 aaKnown RBP0.72□□□□□ -2.29
BBS4-215ENST00000569001 HAAOP46952 286 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 CSN1S1P47710 185 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 ZNF80P51504 273 aaPredicted RBP0.72□□□□□ -2.29
BBS4-215ENST00000569001 FXYD2P54710 66 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 RAB14P61106 215 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 RPL30P62888 115 aaKnown RBP0.72□□□□□ -2.29
BBS4-215ENST00000569001 MRPS15P82914 257 aaKnown RBP0.72□□□□□ -2.29
BBS4-215ENST00000569001 GLO1Q04760 184 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 RPL18Q07020 188 aaKnown RBP0.72□□□□□ -2.29
BBS4-215ENST00000569001 GRK1Q15835 563 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 KRTAP21-3Q3LHN1 58 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 TMEM97Q5BJF2 176 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 C9orf64Q5T6V5 341 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 LPCAT3Q6P1A2 487 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 Q6ZSA8 131 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 OR6V1Q8N148 313 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 C12orf45Q8N5I9 185 aaPredicted RBP0.72□□□□□ -2.29
BBS4-215ENST00000569001 TBC1D19Q8N5T2 526 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 OR8B12Q8NGG6 310 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 OR2T4Q8NH00 348 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 RNASE11Q8TAA1 199 aaKnown RBP0.72□□□□□ -2.29
BBS4-215ENST00000569001 SPACA4Q8TDM5 124 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 PPP1R14BQ96C90 147 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 CHMP6Q96FZ7 201 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 DCUN1D1Q96GG9 259 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 ERMAPQ96PL5 475 aaPredicted RBP0.72□□□□□ -2.29
BBS4-215ENST00000569001 IMMP2LQ96T52 175 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 NIPSNAP1Q9BPW8 284 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 TIMM21Q9BVV7 248 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 OR8D2Q9GZM6 311 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 WDR61Q9GZS3 305 aaKnown RBP0.72□□□□□ -2.29
BBS4-215ENST00000569001 VCX3BQ9H321 246 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 FAM96AQ9H5X1 160 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 CISHQ9NSE2 258 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 IL36BQ9NZH7 164 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 FUT9Q9Y231 359 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 TMEM56-RWDD3S4R434 201 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 KIF13BQ9NQT8 1826 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 PRRC2BQ5JSZ5 2229 aaKnown RBP0.72□□□□□ -2.29
BBS4-215ENST00000569001 ZFYVE9O95405 1425 aa0.72□□□□□ -2.29
BBS4-215ENST00000569001 ROBO3Q96MS0 1386 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 PCF11O94913 1555 aaKnown RBP0.71□□□□□ -2.3
BBS4-215ENST00000569001 HECW2Q9P2P5 1572 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 HEATR5AQ86XA9 2040 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 CCDC88CQ9P219 2028 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 TOPBP1Q92547 1522 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 TRBV20OR9-2A0A075B6H5 130 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 A0A087WUJ7 227 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 MEIKINA0A087WXM9 373 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 TRAV26-2A0A0B4J265 109 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 TRBV10-2A0A0K0K1G8 114 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 TMEM269A0A1B0GVZ9 245 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 I3L521 148 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 FAAHO00519 579 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 PRM2P04554 102 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 IFNA6P05013 189 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 ZNF705DP0CH99 300 aaPredicted RBP0.71□□□□□ -2.3
BBS4-215ENST00000569001 ARL14EPLP0DKL9 152 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 SULT1A3P0DMM9 295 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 SULT1A4P0DMN0 295 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 MSNP26038 577 aaKnown RBP0.71□□□□□ -2.3
BBS4-215ENST00000569001 S100A7P31151 101 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 RPL5P46777 297 aaKnown RBP0.71□□□□□ -2.3
BBS4-215ENST00000569001 RPL28P46779 137 aaKnown RBP0.71□□□□□ -2.3
BBS4-215ENST00000569001 EVX1P49640 407 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 ARF6P62330 175 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 ERHP84090 104 aaKnown RBP0.71□□□□□ -2.3
BBS4-215ENST00000569001 STX5Q13190 355 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 HES1Q14469 280 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 RPL22L1Q6P5R6 122 aaKnown RBP0.71□□□□□ -2.3
BBS4-215ENST00000569001 PACRGLQ8N7B6 248 aa0.71□□□□□ -2.3
BBS4-215ENST00000569001 OR51D1Q8NGF3 324 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms