RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 YIPF6Q96EC8 236 aa10.9□□□□□ -0.66
USB1-214ENST00000568848 SPAG8Q99932 426 aaPredicted RBP10.9□□□□□ -0.66
USB1-214ENST00000568848 CHRDL1Q9BU40 450 aa10.9□□□□□ -0.66
USB1-214ENST00000568848 KRTAP4-5Q9BYR2 181 aa10.9□□□□□ -0.66
USB1-214ENST00000568848 MRPL27Q9P0M9 148 aaKnown RBP10.9□□□□□ -0.66
USB1-214ENST00000568848 A0A087WXM4 84 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 TRAV25A0A0B4J276 109 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 TSPAN4O14817 238 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 TGOLN2O43493 480 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 DIRAS3O95661 229 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 HLA-DQB1P01920 261 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 HLA-GP17693 338 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 MFAP2P55001 183 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 OR2B8PP59922 312 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 RPL8P62917 257 aaKnown RBP10.89□□□□□ -0.67
USB1-214ENST00000568848 TIMM50Q3ZCQ8 353 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 SLC38A6Q8IZM9 456 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 MFSD4AQ8N468 514 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 OR4S2Q8NH73 311 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 ZNF436Q9C0F3 470 aaPredicted RBP10.89□□□□□ -0.67
USB1-214ENST00000568848 DCSTAMPQ9H295 470 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 C5orf66Q9H5L9 145 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 CCL28Q9NRJ3 127 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 MRPS7Q9Y2R9 242 aaKnown RBP10.89□□□□□ -0.67
USB1-214ENST00000568848 PRELID3BQ9Y3B1 194 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 OR2W1Q9Y3N9 320 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 MUC4Q99102 2169 aa10.89□□□□□ -0.67
USB1-214ENST00000568848 F8W735 103 aaPredicted RBP10.88□□□□□ -0.67
USB1-214ENST00000568848 SCGNO76038 276 aa10.88□□□□□ -0.67
USB1-214ENST00000568848 TNFAIP8O95379 198 aa10.88□□□□□ -0.67
USB1-214ENST00000568848 RPS19P39019 145 aaKnown RBP10.88□□□□□ -0.67
USB1-214ENST00000568848 RBMS2Q15434 407 aaKnown RBP10.88□□□□□ -0.67
USB1-214ENST00000568848 GBGT1Q8N5D6 347 aa10.88□□□□□ -0.67
USB1-214ENST00000568848 GVQW1Q8N7I0 195 aa10.88□□□□□ -0.67
USB1-214ENST00000568848 OR11H2Q8NH07 326 aa10.88□□□□□ -0.67
USB1-214ENST00000568848 C11orf45Q8TAV5 145 aa10.88□□□□□ -0.67
USB1-214ENST00000568848 RARRES2Q99969 163 aa10.88□□□□□ -0.67
USB1-214ENST00000568848 HRASLSQ9HDD0 168 aa10.88□□□□□ -0.67
USB1-214ENST00000568848 UFC1Q9Y3C8 167 aa10.88□□□□□ -0.67
USB1-214ENST00000568848 ETV7Q9Y603 341 aa10.88□□□□□ -0.67
USB1-214ENST00000568848 TRBV7-1A0A0A6YYK4 115 aa10.87□□□□□ -0.67
USB1-214ENST00000568848 KIR2DL5BA0A0G2JN68 375 aa10.87□□□□□ -0.67
USB1-214ENST00000568848 KIR2DL5BA0A0G2JPC4 375 aa10.87□□□□□ -0.67
USB1-214ENST00000568848 IGLL5B9A064 214 aa10.87□□□□□ -0.67
USB1-214ENST00000568848 UBE2CO00762 179 aa10.87□□□□□ -0.67
USB1-214ENST00000568848 ADMP35318 185 aa10.87□□□□□ -0.67
USB1-214ENST00000568848 SCAND1P57086 179 aa10.87□□□□□ -0.67
USB1-214ENST00000568848 CNIH2Q6PI25 160 aa10.87□□□□□ -0.67
USB1-214ENST00000568848 KIR2DL5AQ8N109 375 aa10.87□□□□□ -0.67
USB1-214ENST00000568848 UBAC2Q8NBM4 344 aa10.87□□□□□ -0.67
USB1-214ENST00000568848 KIR2DL5BQ8NHK3 375 aa10.87□□□□□ -0.67
USB1-214ENST00000568848 RNF2Q99496 336 aa10.87□□□□□ -0.67
USB1-214ENST00000568848 ANXA10Q9UJ72 324 aa10.87□□□□□ -0.67
USB1-214ENST00000568848 APLNQ9ULZ1 77 aa10.87□□□□□ -0.67
USB1-214ENST00000568848 SULT1C2O00338 296 aa10.86□□□□□ -0.67
USB1-214ENST00000568848 CTXN2P0C2S0 81 aa10.86□□□□□ -0.67
USB1-214ENST00000568848 HIST1H1BP16401 226 aaKnown RBP10.86□□□□□ -0.67
USB1-214ENST00000568848 KLK9Q2XQG4 91 aa10.86□□□□□ -0.67
USB1-214ENST00000568848 TMEM217Q8N7C4 229 aa10.86□□□□□ -0.67
USB1-214ENST00000568848 SECTM1Q8WVN6 248 aa10.86□□□□□ -0.67
USB1-214ENST00000568848 MARC2Q969Z3 335 aa10.86□□□□□ -0.67
USB1-214ENST00000568848 CXorf58Q96LI9 332 aa10.86□□□□□ -0.67
USB1-214ENST00000568848 SCRT1Q9BWW7 348 aa10.86□□□□□ -0.67
USB1-214ENST00000568848 AUNIPQ9H7T9 357 aa10.86□□□□□ -0.67
USB1-214ENST00000568848 VCX3AQ9NNX9 186 aa10.86□□□□□ -0.67
USB1-214ENST00000568848 KLK9Q9UKQ9 250 aa10.86□□□□□ -0.67
USB1-214ENST00000568848 AGRNO00468 2067 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 A0A1B0GVY2 172 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 MEIS3P1A6NDR6 274 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 DHFRP00374 187 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 IGHV3-48P01763 117 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 ATF4P18848 351 aaPredicted RBP10.85□□□□□ -0.67
USB1-214ENST00000568848 MAS1LP35410 378 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 WT1-ASQ06250 92 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 SPAG16Q8N0X2 631 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 BEST4Q8NFU0 473 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 VSTM2AQ8TAG5 236 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 GALNT14Q96FL9 552 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 HSD17B10Q99714 261 aaKnown RBP10.85□□□□□ -0.67
USB1-214ENST00000568848 CSTL1Q9H114 145 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 DIABLOQ9NR28 239 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 NSG2Q9Y328 171 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 HSPG2P98160 4391 aa10.85□□□□□ -0.67
USB1-214ENST00000568848 OR4C46A6NHA9 309 aa10.84□□□□□ -0.67
USB1-214ENST00000568848 UPK2O00526 184 aa10.84□□□□□ -0.67
USB1-214ENST00000568848 OR13C7P0DN81 318 aa10.84□□□□□ -0.67
USB1-214ENST00000568848 PTBP1P26599 531 aaKnown RBP eCLIP10.84□□□□□ -0.67
USB1-214ENST00000568848 ELLP55199 621 aaPredicted RBP10.84□□□□□ -0.67
USB1-214ENST00000568848 ARPC4P59998 168 aa10.84□□□□□ -0.67
USB1-214ENST00000568848 LEMD1Q68G75 181 aa10.84□□□□□ -0.67
USB1-214ENST00000568848 SLC25A24Q6NUK1 477 aa10.84□□□□□ -0.67
USB1-214ENST00000568848 ZNF767PQ75MW2 155 aa10.84□□□□□ -0.67
USB1-214ENST00000568848 HOGA1Q86XE5 327 aa10.84□□□□□ -0.67
USB1-214ENST00000568848 FAM24BQ8N5W8 94 aa10.84□□□□□ -0.67
USB1-214ENST00000568848 C2CD4CQ8TF44 421 aa10.84□□□□□ -0.67
USB1-214ENST00000568848 FUNDC2Q9BWH2 189 aa10.84□□□□□ -0.67
USB1-214ENST00000568848 HINT2Q9BX68 163 aa10.84□□□□□ -0.67
USB1-214ENST00000568848 DAZ1Q9NQZ3 744 aaKnown RBP10.84□□□□□ -0.67
USB1-214ENST00000568848 BET1LQ9NYM9 111 aa10.84□□□□□ -0.67
USB1-214ENST00000568848 A0A0A6YYH2 397 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms