RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 GOSR2O14653 212 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 ST8SIA3O43173 380 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 KCNAB3O43448 404 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 RBMXL2O75526 392 aaKnown RBP6.66□□□□□ -1.34
SF3B3-212ENST00000568539 NDUFA7O95182 113 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 CNIH1O95406 144 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 OPN1MWP04001 364 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 IGF1P05019 195 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 OPN1MW2P0DN77 364 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 OPN1MW3P0DN78 364 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 RPL27AP46776 148 aaKnown RBP6.66□□□□□ -1.34
SF3B3-212ENST00000568539 CRIP2P52943 208 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-212ENST00000568539 H2BFSP57053 126 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 HSPE1P61604 102 aaKnown RBP6.66□□□□□ -1.34
SF3B3-212ENST00000568539 RRAS2P62070 204 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-212ENST00000568539 FCN2Q15485 313 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 IAH1Q2TAA2 248 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-212ENST00000568539 PDLIM3Q53GG5 364 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-212ENST00000568539 THOC7Q6I9Y2 204 aaKnown RBP6.66□□□□□ -1.34
SF3B3-212ENST00000568539 GSG1LQ6UXU4 331 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 ZBTB8BQ8NAP8 495 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-212ENST00000568539 OR11H7Q8NGC8 314 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 OR4D5Q8NGN0 318 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 GRPEL2Q8TAA5 225 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 FAM103A1Q9BTL3 118 aaKnown RBP6.66□□□□□ -1.34
SF3B3-212ENST00000568539 MED28Q9H204 178 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 C16orf95Q9H693 158 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 PARP11Q9NR21 331 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 NDUFA4L2Q9NRX3 87 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 SERTAD4Q9NUC0 356 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 MGAT4CQ9UBM8 478 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 HSPB7Q9UBY9 170 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 ZNF580Q9UK33 172 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 TLN2Q9Y4G6 2542 aa6.66□□□□□ -1.34
SF3B3-212ENST00000568539 C5orf51A6NDU8 294 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 FAM25EA8MYX2 175 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 FAM229AH3BQW9 127 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 AP4M1O00189 453 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 SIX6O95475 246 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 IFNA17P01571 189 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 TRAPPC2P0DI81 140 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 TRAPPC2BP0DI82 140 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 HKR1P10072 659 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 CXCL3P19876 107 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 SPCS3P61009 180 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 PRCDQ00LT1 54 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 TNFRSF9Q07011 255 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 IL15RAQ13261 267 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 TMEM95Q3KNT9 176 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 C19orf54Q5BKX5 351 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 CXorf66Q5JRM2 361 aaPredicted RBP6.65□□□□□ -1.34
SF3B3-212ENST00000568539 ASPHD1Q5U4P2 390 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 OR1L8Q8NGR8 309 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 OR52E5Q8NH55 327 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 OR1S1Q8NH92 325 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 OR2T6Q8NHC8 308 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 SGMS2Q8NHU3 365 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 LINC01006Q8NI28 216 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 C2orf50Q96LR7 162 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 FYTTD1Q96QD9 318 aaKnown RBP6.65□□□□□ -1.34
SF3B3-212ENST00000568539 PDCD10Q9BUL8 212 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 CACFD1Q9UGQ2 172 aa6.65□□□□□ -1.34
SF3B3-212ENST00000568539 TRAV41A0A0B4J266 112 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 A0A1B0GVG6 124 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 IGLC7A0M8Q6 106 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 HMX3A6NHT5 357 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 FAM90A26D6RGX4 464 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 INS-IGF2F8WCM5 200 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 G3V318 75 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 NXPH3O95157 252 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 AREGP15514 252 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 VDAC2P45880 294 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-212ENST00000568539 CFHR3Q02985 330 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 WT1-ASQ06250 92 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 SRSF4Q08170 494 aaKnown RBP6.64□□□□□ -1.35
SF3B3-212ENST00000568539 AKIRIN2Q53H80 203 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 SPINK9Q5DT21 86 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 STPG2Q8N412 459 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-212ENST00000568539 LFNGQ8NES3 379 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 OR10W1Q8NGF6 305 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 OR4F5Q8NH21 305 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 ABHD5Q8WTS1 349 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 NOL4LQ96MY1 436 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-212ENST00000568539 SRSF8Q9BRL6 282 aaKnown RBP6.64□□□□□ -1.35
SF3B3-212ENST00000568539 HINT2Q9BX68 163 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 RBKSQ9H477 322 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 GSKIPQ9P0R6 139 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 LINC00527Q9UJ94 153 aa6.64□□□□□ -1.35
SF3B3-212ENST00000568539 A0A1W2PN81 502 aa6.63□□□□□ -1.35
SF3B3-212ENST00000568539 CEBPZOSA8MTT3 80 aa6.63□□□□□ -1.35
SF3B3-212ENST00000568539 MBPP02686 304 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-212ENST00000568539 APELAP0DMC3 54 aa6.63□□□□□ -1.35
SF3B3-212ENST00000568539 PPIFP30405 207 aaKnown RBP6.63□□□□□ -1.35
SF3B3-212ENST00000568539 CHRNA7P36544 502 aa6.63□□□□□ -1.35
SF3B3-212ENST00000568539 NKX2-1P43699 371 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-212ENST00000568539 TMEM267Q0VDI3 215 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-212ENST00000568539 ECSCRQ19T08 205 aa6.63□□□□□ -1.35
SF3B3-212ENST00000568539 KRTAP24-1Q3LI83 254 aa6.63□□□□□ -1.35
SF3B3-212ENST00000568539 UNQ5815/PRO19632Q6UWF5 114 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms