RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 ZNF207O43670 478 aaKnown RBP11.39□□□□□ -0.59
CDR2-206ENST00000567406 RLN1P04808 185 aa11.39□□□□□ -0.59
CDR2-206ENST00000567406 C8orf88P0DMB2 117 aa11.39□□□□□ -0.59
CDR2-206ENST00000567406 OR13C7P0DN81 318 aa11.39□□□□□ -0.59
CDR2-206ENST00000567406 PTBP1P26599 531 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDR2-206ENST00000567406 MFAP2P55001 183 aa11.39□□□□□ -0.59
CDR2-206ENST00000567406 HERV-K104P61576 105 aa11.39□□□□□ -0.59
CDR2-206ENST00000567406 WT1-ASQ06250 92 aa11.39□□□□□ -0.59
CDR2-206ENST00000567406 POU2AF1Q16633 256 aa11.39□□□□□ -0.59
CDR2-206ENST00000567406 RBPMS2Q6ZRY4 209 aaKnown RBP11.39□□□□□ -0.59
CDR2-206ENST00000567406 YIPF6Q96EC8 236 aa11.39□□□□□ -0.59
CDR2-206ENST00000567406 AIFM2Q9BRQ8 373 aa11.39□□□□□ -0.59
CDR2-206ENST00000567406 ZNF2Q9BSG1 426 aaPredicted RBP11.39□□□□□ -0.59
CDR2-206ENST00000567406 QTRT1Q9BXR0 403 aaKnown RBP11.39□□□□□ -0.59
CDR2-206ENST00000567406 IFT46Q9NQC8 304 aa11.39□□□□□ -0.59
CDR2-206ENST00000567406 A0A0A6YYH2 397 aa11.38□□□□□ -0.59
CDR2-206ENST00000567406 A6NJ64 397 aa11.38□□□□□ -0.59
CDR2-206ENST00000567406 TGOLN2O43493 480 aa11.38□□□□□ -0.59
CDR2-206ENST00000567406 PGLYRP1O75594 196 aaPredicted RBP11.38□□□□□ -0.59
CDR2-206ENST00000567406 TRAPPC2P0DI81 140 aa11.38□□□□□ -0.59
CDR2-206ENST00000567406 TRAPPC2BP0DI82 140 aa11.38□□□□□ -0.59
CDR2-206ENST00000567406 SCAND1P57086 179 aa11.38□□□□□ -0.59
CDR2-206ENST00000567406 LSM3P62310 102 aaKnown RBP11.38□□□□□ -0.59
CDR2-206ENST00000567406 EWSR1Q01844 656 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDR2-206ENST00000567406 OR1L6Q8NGR2 347 aa11.38□□□□□ -0.59
CDR2-206ENST00000567406 ZNF436Q9C0F3 470 aaPredicted RBP11.38□□□□□ -0.59
CDR2-206ENST00000567406 PLEKHA2Q9HB19 425 aa11.38□□□□□ -0.59
CDR2-206ENST00000567406 MRPL27Q9P0M9 148 aaKnown RBP11.38□□□□□ -0.59
CDR2-206ENST00000567406 KRASP01116 189 aa11.37□□□□□ -0.59
CDR2-206ENST00000567406 SERPINE2P07093 398 aa11.37□□□□□ -0.59
CDR2-206ENST00000567406 G6PCP35575 357 aa11.37□□□□□ -0.59
CDR2-206ENST00000567406 LPAR6P43657 344 aa11.37□□□□□ -0.59
CDR2-206ENST00000567406 CBX5P45973 191 aa11.37□□□□□ -0.59
CDR2-206ENST00000567406 PMS2P11Q13670 270 aa11.37□□□□□ -0.59
CDR2-206ENST00000567406 GDPD1Q8N9F7 314 aa11.37□□□□□ -0.59
CDR2-206ENST00000567406 FCAMRQ8WWV6 532 aa11.37□□□□□ -0.59
CDR2-206ENST00000567406 CHRDL1Q9BU40 450 aa11.37□□□□□ -0.59
CDR2-206ENST00000567406 MRPS26Q9BYN8 205 aaKnown RBP11.37□□□□□ -0.59
CDR2-206ENST00000567406 UFC1Q9Y3C8 167 aa11.37□□□□□ -0.59
CDR2-206ENST00000567406 DBX1A6NMT0 343 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 MARCH11A6NNE9 402 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 XRCC3O43542 346 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 RPS19P39019 145 aaKnown RBP11.36□□□□□ -0.59
CDR2-206ENST00000567406 TAS2R20P59543 309 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 ERVK-16P61578 105 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 ANKRD55Q3KP44 614 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 DHRS11Q6UWP2 260 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 OR2C3Q8N628 320 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 UBAC2Q8NBM4 344 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 OR1L8Q8NGR8 309 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 CD300LFQ8TDQ1 290 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 TMEM190Q8WZ59 177 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 C20orf24Q9BUV8 137 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 NDUFA4L2Q9NRX3 87 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 THYN1Q9P016 225 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 OR51B2Q9Y5P1 312 aa11.36□□□□□ -0.59
CDR2-206ENST00000567406 KMT2AQ03164 3969 aa11.35□□□□□ -0.59
CDR2-206ENST00000567406 TRAV25A0A0B4J276 109 aa11.35□□□□□ -0.59
CDR2-206ENST00000567406 A0A0J9YWU9 116 aa11.35□□□□□ -0.59
CDR2-206ENST00000567406 F8W735 103 aaPredicted RBP11.35□□□□□ -0.59
CDR2-206ENST00000567406 SAMD12Q8N8I0 201 aa11.35□□□□□ -0.59
CDR2-206ENST00000567406 VN1R17PQ8TDU5 208 aa11.35□□□□□ -0.59
CDR2-206ENST00000567406 SCARB1Q8WTV0 552 aa11.35□□□□□ -0.59
CDR2-206ENST00000567406 MARC2Q969Z3 335 aa11.35□□□□□ -0.59
CDR2-206ENST00000567406 MOB3AQ96BX8 217 aa11.35□□□□□ -0.59
CDR2-206ENST00000567406 S100A16Q96FQ6 103 aaKnown RBP11.35□□□□□ -0.59
CDR2-206ENST00000567406 SRSF8Q9BRL6 282 aaKnown RBP11.35□□□□□ -0.59
CDR2-206ENST00000567406 FUNDC2Q9BWH2 189 aa11.35□□□□□ -0.59
CDR2-206ENST00000567406 FXYD6Q9H0Q3 95 aa11.35□□□□□ -0.59
CDR2-206ENST00000567406 COMMD9Q9P000 198 aa11.35□□□□□ -0.59
CDR2-206ENST00000567406 F11RQ9Y624 299 aaKnown RBP11.35□□□□□ -0.59
CDR2-206ENST00000567406 RPL35AP18077 110 aaKnown RBP11.34□□□□□ -0.59
CDR2-206ENST00000567406 F2RP25116 425 aa11.34□□□□□ -0.59
CDR2-206ENST00000567406 HLA-DMAP28067 261 aa11.34□□□□□ -0.59
CDR2-206ENST00000567406 ADMP35318 185 aa11.34□□□□□ -0.59
CDR2-206ENST00000567406 ELLP55199 621 aaPredicted RBP11.34□□□□□ -0.59
CDR2-206ENST00000567406 DEFB135Q30KP9 77 aa11.34□□□□□ -0.59
CDR2-206ENST00000567406 PHLDA2Q53GA4 152 aa11.34□□□□□ -0.59
CDR2-206ENST00000567406 UBE2NLQ5JXB2 153 aa11.34□□□□□ -0.59
CDR2-206ENST00000567406 TMEM69Q5SWH9 247 aa11.34□□□□□ -0.59
CDR2-206ENST00000567406 LYSMD2Q8IV50 215 aa11.34□□□□□ -0.59
CDR2-206ENST00000567406 SLC38A6Q8IZM9 456 aa11.34□□□□□ -0.59
CDR2-206ENST00000567406 OR5H2Q8NGV7 314 aa11.34□□□□□ -0.59
CDR2-206ENST00000567406 DGCR14Q96DF8 476 aaKnown RBP11.34□□□□□ -0.59
CDR2-206ENST00000567406 C5orf66Q9H5L9 145 aa11.34□□□□□ -0.59
CDR2-206ENST00000567406 C21orf62Q9NYP8 219 aa11.34□□□□□ -0.59
CDR2-206ENST00000567406 ANAPC10Q9UM13 185 aa11.34□□□□□ -0.59
CDR2-206ENST00000567406 FRAS1Q86XX4 4008 aa11.33□□□□□ -0.6
CDR2-206ENST00000567406 IGHV3-49A0A0A0MS15 119 aa11.33□□□□□ -0.6
CDR2-206ENST00000567406 CXorf65A6NEN9 183 aa11.33□□□□□ -0.6
CDR2-206ENST00000567406 K7EIM0 57 aa11.33□□□□□ -0.6
CDR2-206ENST00000567406 TSPAN4O14817 238 aa11.33□□□□□ -0.6
CDR2-206ENST00000567406 IGHV3-48P01763 117 aa11.33□□□□□ -0.6
CDR2-206ENST00000567406 HRH1P35367 487 aa11.33□□□□□ -0.6
CDR2-206ENST00000567406 ZNF124Q15973 351 aa11.33□□□□□ -0.6
CDR2-206ENST00000567406 ODF3L2Q3SX64 289 aa11.33□□□□□ -0.6
CDR2-206ENST00000567406 Q56UQ5 140 aa11.33□□□□□ -0.6
CDR2-206ENST00000567406 LSM10Q969L4 123 aaKnown RBP11.33□□□□□ -0.6
CDR2-206ENST00000567406 BSCL2Q96G97 398 aaPredicted RBP11.33□□□□□ -0.6
CDR2-206ENST00000567406 ZNF414Q96IQ9 312 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms