RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 HOXA5P20719 270 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 GLIPR1P48060 266 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 RND2P52198 227 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 CFHR1Q03591 330 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 TMEM30BQ3MIR4 351 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 TMEM177Q53S58 311 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 IDI2-AS1Q9NZ38 188 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 TUBD1Q9UJT1 453 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 DSCAML1Q8TD84 2053 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 LHBP01229 141 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 FXYD3Q14802 87 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 GCSAMQ8N6F7 178 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 ADAD2Q8NCV1 583 aaKnown RBP5.34□□□□□ -1.55
CDH13-209ENST00000567109 GGACTQ9BVM4 153 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 IL36RNQ9UBH0 155 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 TRBV5-5A0A0J9YX44 114 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 J3QT63 122 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 PPYP01298 95 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 HBZP02008 142 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 SRSF7Q16629 238 aaKnown RBP eCLIP5.34□□□□□ -1.55
CDH13-209ENST00000567109 MMD2Q8IY49 270 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 PNKDQ8N490 385 aa5.34□□□□□ -1.55
CDH13-209ENST00000567109 IGHV1-45A0A0A0MS14 117 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 H3BQ15 152 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 SIGLEC5O15389 551 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 NTN1O95631 604 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 TMEM170BQ5T4T1 132 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 GVQW1Q8N7I0 195 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 SLC6A13Q9NSD5 602 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 PAM16Q9Y3D7 125 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 RNF222A6NCQ9 220 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 TMEM8BA6NDV4 472 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 NPIPB11E5RHQ5 1161 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 LINC00869P0C866 280 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 CGB3P0DN86 165 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 TDGF1P3P51864 188 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 EFNB2P52799 333 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 ZNF324BQ6AW86 544 aaPredicted RBP5.34□□□□□ -1.56
CDH13-209ENST00000567109 TMEM91Q6ZNR0 172 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 TMEM45BQ96B21 275 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 FAM60AQ9NP50 221 aa5.34□□□□□ -1.56
CDH13-209ENST00000567109 TRBV6-7A0A0A0MS04 114 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 C7orf71A4D174 169 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 HPRT1P00492 218 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 ZNF25P17030 456 aaPredicted RBP5.33□□□□□ -1.56
CDH13-209ENST00000567109 PEBP1P30086 187 aaKnown RBP5.33□□□□□ -1.56
CDH13-209ENST00000567109 LOC102723996A0A087X1L8 192 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 IGHV3-49A0A0A0MS15 119 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 CKS1BP61024 79 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 RPS11P62280 158 aaKnown RBP eCLIP5.33□□□□□ -1.56
CDH13-209ENST00000567109 MEF2BQ02080 365 aaPredicted RBP5.33□□□□□ -1.56
CDH13-209ENST00000567109 COLCA1Q6ZS62 124 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 GLRX5Q86SX6 157 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 PRSS33Q8NF86 280 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 PRSS22Q9GZN4 317 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 SEPSECSQ9HD40 501 aaKnown RBP5.33□□□□□ -1.56
CDH13-209ENST00000567109 HOGA1Q86XE5 327 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 KIAA1549LQ6ZVL6 1849 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 FOXI3A8MTJ6 420 aaPredicted RBP5.33□□□□□ -1.56
CDH13-209ENST00000567109 ASAH2BP0C7U1 165 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 RCC1P18754 421 aaPredicted RBP5.33□□□□□ -1.56
CDH13-209ENST00000567109 CTAG1AP78358 180 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 FDCSPQ8NFU4 85 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 ZFP36L1Q07352 338 aaKnown RBP5.33□□□□□ -1.56
CDH13-209ENST00000567109 PLA2G2CQ5R387 149 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 TCF24Q7RTU0 167 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 VN1R17PQ8TDU5 208 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 PXMP4Q9Y6I8 212 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 EXPH5Q8NEV8 1989 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 F8VVB4 439 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 F8VWA3 439 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 FGF16O43320 207 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 EIF3GO75821 320 aaKnown RBP eCLIP5.33□□□□□ -1.56
CDH13-209ENST00000567109 CGB7P0DN87 165 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 MYOD1P15172 320 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 CXCL2P19875 107 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 RPL32P62910 135 aaKnown RBP5.33□□□□□ -1.56
CDH13-209ENST00000567109 SRSF4Q08170 494 aaKnown RBP5.33□□□□□ -1.56
CDH13-209ENST00000567109 LY6DQ14210 128 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 SPNS2Q8IVW8 549 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 WDFY1Q8IWB7 410 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 OR1P1Q8NH06 330 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 CLDND2Q8NHS1 167 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 TMEM167AQ8TBQ9 72 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 PLXNA3P51805 1871 aa5.33□□□□□ -1.56
CDH13-209ENST00000567109 TRAV21A0A0B4J279 112 aa5.32□□□□□ -1.56
CDH13-209ENST00000567109 RAB32Q13637 225 aa5.32□□□□□ -1.56
CDH13-209ENST00000567109 ARTNQ5T4W7 220 aa5.32□□□□□ -1.56
CDH13-209ENST00000567109 SDHCQ99643 169 aaPredicted RBP5.32□□□□□ -1.56
CDH13-209ENST00000567109 CITED2Q99967 270 aaPredicted RBP5.32□□□□□ -1.56
CDH13-209ENST00000567109 CT62P0C5K7 136 aa5.32□□□□□ -1.56
CDH13-209ENST00000567109 ASIPP42127 132 aa5.32□□□□□ -1.56
CDH13-209ENST00000567109 EFNB1P98172 346 aa5.32□□□□□ -1.56
CDH13-209ENST00000567109 ZXDCQ2QGD7 858 aaPredicted RBP5.32□□□□□ -1.56
CDH13-209ENST00000567109 C10orf126Q8N4M7 172 aa5.32□□□□□ -1.56
CDH13-209ENST00000567109 TRAV1-1A0A0B4J248 108 aa5.32□□□□□ -1.56
CDH13-209ENST00000567109 A0A0U1RQV5 110 aa5.32□□□□□ -1.56
CDH13-209ENST00000567109 TLNRD1Q9H1K6 362 aa5.32□□□□□ -1.56
CDH13-209ENST00000567109 EDA2RQ9HAV5 297 aa5.32□□□□□ -1.56
CDH13-209ENST00000567109 TRBV24-1A0A075B6N3 115 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms