RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TEX50A0A1B0GTY4 177 aa13.75□□□□□ -0.21
USB1-213ENST00000566292 F2RP25116 425 aa13.75□□□□□ -0.21
USB1-213ENST00000566292 GPR183P32249 361 aa13.75□□□□□ -0.21
USB1-213ENST00000566292 TM4SF20Q53R12 229 aa13.75□□□□□ -0.21
USB1-213ENST00000566292 ZNF57Q68EA5 555 aaPredicted RBP13.75□□□□□ -0.21
USB1-213ENST00000566292 TSPAN14Q8NG11 270 aa13.75□□□□□ -0.21
USB1-213ENST00000566292 OR5H2Q8NGV7 314 aa13.75□□□□□ -0.21
USB1-213ENST00000566292 BORCS5Q969J3 196 aa13.75□□□□□ -0.21
USB1-213ENST00000566292 A0A087WXM4 84 aa13.74□□□□□ -0.21
USB1-213ENST00000566292 MARCH11A6NNE9 402 aa13.74□□□□□ -0.21
USB1-213ENST00000566292 EIF4EP06730 217 aaKnown RBP13.74□□□□□ -0.21
USB1-213ENST00000566292 PTBP1P26599 531 aaKnown RBP eCLIP13.74□□□□□ -0.21
USB1-213ENST00000566292 PRSS3P35030 304 aa13.74□□□□□ -0.21
USB1-213ENST00000566292 TAS2R46P59540 309 aa13.74□□□□□ -0.21
USB1-213ENST00000566292 WT1-ASQ06250 92 aa13.74□□□□□ -0.21
USB1-213ENST00000566292 ZNF585BQ52M93 769 aa13.74□□□□□ -0.21
USB1-213ENST00000566292 THOC7Q6I9Y2 204 aaKnown RBP13.74□□□□□ -0.21
USB1-213ENST00000566292 LYSMD2Q8IV50 215 aa13.74□□□□□ -0.21
USB1-213ENST00000566292 GDPD1Q8N9F7 314 aa13.74□□□□□ -0.21
USB1-213ENST00000566292 FCAMRQ8WWV6 532 aa13.74□□□□□ -0.21
USB1-213ENST00000566292 IGHV3-35A0A0C4DH35 117 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 TRAPPC2P0DI81 140 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 TRAPPC2BP0DI82 140 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 C8orf88P0DMB2 117 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 OR13C7P0DN81 318 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 LPAR6P43657 344 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 MFAP2P55001 183 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 ERVK-16P61578 105 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 BTNL8Q6UX41 500 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 OR1L8Q8NGR8 309 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 SLC25A46Q96AG3 418 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 DGCR14Q96DF8 476 aaKnown RBP13.73□□□□□ -0.21
USB1-213ENST00000566292 VCX3AQ9NNX9 186 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 NDUFA4L2Q9NRX3 87 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 THYN1Q9P016 225 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 NSG2Q9Y328 171 aa13.73□□□□□ -0.21
USB1-213ENST00000566292 GPR31O00270 319 aa13.72□□□□□ -0.21
USB1-213ENST00000566292 SCAF4O95104 1147 aaKnown RBP13.72□□□□□ -0.21
USB1-213ENST00000566292 KRASP01116 189 aa13.72□□□□□ -0.21
USB1-213ENST00000566292 SERPINE2P07093 398 aa13.72□□□□□ -0.21
USB1-213ENST00000566292 HLA-DMAP28067 261 aa13.72□□□□□ -0.21
USB1-213ENST00000566292 HRH1P35367 487 aa13.72□□□□□ -0.21
USB1-213ENST00000566292 G6PCP35575 357 aa13.72□□□□□ -0.21
USB1-213ENST00000566292 PLET1Q6UQ28 207 aa13.72□□□□□ -0.21
USB1-213ENST00000566292 SLC16A13Q7RTY0 426 aa13.72□□□□□ -0.21
USB1-213ENST00000566292 OR6F1Q8NGZ6 308 aa13.72□□□□□ -0.21
USB1-213ENST00000566292 VN1R17PQ8TDU5 208 aa13.72□□□□□ -0.21
USB1-213ENST00000566292 GPX8Q8TED1 209 aa13.72□□□□□ -0.21
USB1-213ENST00000566292 ZNF436Q9C0F3 470 aaPredicted RBP13.72□□□□□ -0.21
USB1-213ENST00000566292 TGOLN2O43493 480 aa13.71□□□□□ -0.21
USB1-213ENST00000566292 TNFAIP8O95379 198 aa13.71□□□□□ -0.21
USB1-213ENST00000566292 NCS1P62166 190 aa13.71□□□□□ -0.21
USB1-213ENST00000566292 SLC25A24Q6NUK1 477 aa13.71□□□□□ -0.21
USB1-213ENST00000566292 CMTM1Q8IZ96 169 aa13.71□□□□□ -0.21
USB1-213ENST00000566292 CADM3Q8N126 398 aa13.71□□□□□ -0.21
USB1-213ENST00000566292 OR52B4Q8NGK2 314 aa13.71□□□□□ -0.21
USB1-213ENST00000566292 COMMD3Q9UBI1 195 aa13.71□□□□□ -0.21
USB1-213ENST00000566292 OR51B2Q9Y5P1 312 aa13.71□□□□□ -0.21
USB1-213ENST00000566292 IGHV3-21A0A0B4J1V1 117 aa13.7□□□□□ -0.22
USB1-213ENST00000566292 ELLP55199 621 aaPredicted RBP13.7□□□□□ -0.22
USB1-213ENST00000566292 PHLDA2Q53GA4 152 aa13.7□□□□□ -0.22
USB1-213ENST00000566292 HSD17B13Q7Z5P4 300 aaPredicted RBP13.7□□□□□ -0.22
USB1-213ENST00000566292 TMEM190Q8WZ59 177 aa13.7□□□□□ -0.22
USB1-213ENST00000566292 LSM10Q969L4 123 aaKnown RBP13.7□□□□□ -0.22
USB1-213ENST00000566292 MARC2Q969Z3 335 aa13.7□□□□□ -0.22
USB1-213ENST00000566292 FUNDC2Q9BWH2 189 aa13.7□□□□□ -0.22
USB1-213ENST00000566292 HINT2Q9BX68 163 aa13.7□□□□□ -0.22
USB1-213ENST00000566292 MRPL27Q9P0M9 148 aaKnown RBP13.7□□□□□ -0.22
USB1-213ENST00000566292 UFC1Q9Y3C8 167 aa13.7□□□□□ -0.22
USB1-213ENST00000566292 F11RQ9Y624 299 aaKnown RBP13.7□□□□□ -0.22
USB1-213ENST00000566292 OR2T8A6NH00 312 aa13.69□□□□□ -0.22
USB1-213ENST00000566292 DBX1A6NMT0 343 aa13.69□□□□□ -0.22
USB1-213ENST00000566292 F8W735 103 aaPredicted RBP13.69□□□□□ -0.22
USB1-213ENST00000566292 CYB5BO43169 146 aa13.69□□□□□ -0.22
USB1-213ENST00000566292 APOA1P02647 267 aa13.69□□□□□ -0.22
USB1-213ENST00000566292 VBP1P61758 197 aa13.69□□□□□ -0.22
USB1-213ENST00000566292 SNX29P2Q8IUI4 249 aa13.69□□□□□ -0.22
USB1-213ENST00000566292 TRAV25A0A0B4J276 109 aa13.68□□□□□ -0.22
USB1-213ENST00000566292 SNAPC5O75971 98 aa13.68□□□□□ -0.22
USB1-213ENST00000566292 SCARB1Q8WTV0 552 aa13.68□□□□□ -0.22
USB1-213ENST00000566292 BSCL2Q96G97 398 aaPredicted RBP13.68□□□□□ -0.22
USB1-213ENST00000566292 CMTM3Q96MX0 182 aa13.68□□□□□ -0.22
USB1-213ENST00000566292 CHRDL1Q9BU40 450 aa13.68□□□□□ -0.22
USB1-213ENST00000566292 SCPEP1Q9HB40 452 aa13.68□□□□□ -0.22
USB1-213ENST00000566292 SMIM31A0A1B0GVY4 71 aa13.67□□□□□ -0.22
USB1-213ENST00000566292 K7EIM0 57 aa13.67□□□□□ -0.22
USB1-213ENST00000566292 HPGDSO60760 199 aa13.67□□□□□ -0.22
USB1-213ENST00000566292 ELK1P19419 428 aa13.67□□□□□ -0.22
USB1-213ENST00000566292 ADMP35318 185 aa13.67□□□□□ -0.22
USB1-213ENST00000566292 TSPAN5P62079 268 aa13.67□□□□□ -0.22
USB1-213ENST00000566292 ANKRD55Q3KP44 614 aa13.67□□□□□ -0.22
USB1-213ENST00000566292 RBPMS2Q6ZRY4 209 aaKnown RBP13.67□□□□□ -0.22
USB1-213ENST00000566292 TBC1D26Q86UD7 250 aa13.67□□□□□ -0.22
USB1-213ENST00000566292 TMEM14BQ9NUH8 114 aa13.67□□□□□ -0.22
USB1-213ENST00000566292 C21orf62Q9NYP8 219 aa13.67□□□□□ -0.22
USB1-213ENST00000566292 PRNDQ9UKY0 176 aa13.67□□□□□ -0.22
USB1-213ENST00000566292 C15orf61A6NNL5 157 aa13.66□□□□□ -0.22
USB1-213ENST00000566292 IGKV1-39P01597 117 aa13.66□□□□□ -0.22
USB1-213ENST00000566292 IGKV1D-39P04432 117 aa13.66□□□□□ -0.22
USB1-213ENST00000566292 RCVRNP35243 200 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms