RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 CD5P06127 495 aa13.57□□□□□ -0.24
RAB40C-210ENST00000566290 OR2B8PP59922 312 aa13.57□□□□□ -0.24
RAB40C-210ENST00000566290 PMS2P11Q13670 270 aa13.57□□□□□ -0.24
RAB40C-210ENST00000566290 ZDHHC16Q969W1 377 aa13.57□□□□□ -0.24
RAB40C-210ENST00000566290 HARBI1Q96MB7 349 aa13.57□□□□□ -0.24
RAB40C-210ENST00000566290 LINC00052Q96N35 136 aa13.57□□□□□ -0.24
RAB40C-210ENST00000566290 KPTNQ9Y664 436 aa13.57□□□□□ -0.24
RAB40C-210ENST00000566290 CR1P17927 2039 aa13.56□□□□□ -0.24
RAB40C-210ENST00000566290 TMEM218A2RU14 115 aa13.56□□□□□ -0.24
RAB40C-210ENST00000566290 OOSP1A8MZH6 123 aa13.56□□□□□ -0.24
RAB40C-210ENST00000566290 BUB1B-PAK6H3BSN5 160 aa13.56□□□□□ -0.24
RAB40C-210ENST00000566290 NDUFS6O75380 124 aaKnown RBP13.56□□□□□ -0.24
RAB40C-210ENST00000566290 TSPAN15O95858 294 aa13.56□□□□□ -0.24
RAB40C-210ENST00000566290 IGKV1-16P04430 117 aa13.56□□□□□ -0.24
RAB40C-210ENST00000566290 SAA1P0DJI8 122 aaPredicted RBP13.56□□□□□ -0.24
RAB40C-210ENST00000566290 PRTN3P24158 256 aa13.56□□□□□ -0.24
RAB40C-210ENST00000566290 DVL1P1P54792 670 aaPredicted RBP13.56□□□□□ -0.24
RAB40C-210ENST00000566290 RAB11AP62491 216 aa13.56□□□□□ -0.24
RAB40C-210ENST00000566290 AKR1C8PQ5T2L2 129 aa13.56□□□□□ -0.24
RAB40C-210ENST00000566290 TMEM182Q6ZP80 229 aaPredicted RBP13.56□□□□□ -0.24
RAB40C-210ENST00000566290 OR4P4Q8NGL7 312 aa13.56□□□□□ -0.24
RAB40C-210ENST00000566290 CARHSP1Q9Y2V2 147 aaKnown RBP13.56□□□□□ -0.24
RAB40C-210ENST00000566290 POLR3KQ9Y2Y1 108 aaPredicted RBP13.56□□□□□ -0.24
RAB40C-210ENST00000566290 LOC105371242A0A075B767 164 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 ODF3BA8MYP8 253 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 H7C2Y5 167 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 ENSAO43768 121 aaKnown RBP13.55□□□□□ -0.24
RAB40C-210ENST00000566290 IGHV2-5P01817 119 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 MBP02144 154 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 PRH1P02810 166 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 SNCAP37840 140 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 HABP2Q14520 560 aaPredicted RBP13.55□□□□□ -0.24
RAB40C-210ENST00000566290 SLC25A24Q6NUK1 477 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 SSX9Q7RTT3 188 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 THNSL2Q86YJ6 484 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 TEX45Q8NA69 505 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 MS4A7Q9GZW8 240 aaPredicted RBP13.55□□□□□ -0.24
RAB40C-210ENST00000566290 HRH4Q9H3N8 390 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 HEYLQ9NQ87 328 aaPredicted RBP13.55□□□□□ -0.24
RAB40C-210ENST00000566290 KCNIP2Q9NS61 270 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 KIAA1456Q9P272 454 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 WDR83OSQ9Y284 106 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 OR51B2Q9Y5P1 312 aa13.55□□□□□ -0.24
RAB40C-210ENST00000566290 TRAV3A0A0B4J244 114 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 SRRM4A7MD48 611 aaKnown RBP13.54□□□□□ -0.24
RAB40C-210ENST00000566290 NDUFS8O00217 210 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 IGLV2-23P01705 113 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 MAS1LP35410 378 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 HOXA1P49639 335 aaPredicted RBP13.54□□□□□ -0.24
RAB40C-210ENST00000566290 RAB2AP61019 212 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 VMA21Q3ZAQ7 101 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 VKORC1L1Q8N0U8 176 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 Q8N7P7 452 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 SLC24A4Q8NFF2 622 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 C10orf105Q8TEF2 133 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 MBD3L1Q8WWY6 194 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 RBMXL1Q96E39 390 aaKnown RBP13.54□□□□□ -0.24
RAB40C-210ENST00000566290 PBDC1Q9BVG4 233 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 SCRT1Q9BWW7 348 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 SEC11CQ9BY50 192 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 ENY2Q9NPA8 101 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 ZNRD1Q9P1U0 126 aa13.54□□□□□ -0.24
RAB40C-210ENST00000566290 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.53□□□□□ -0.244e-6■■■■□ 21.3
RAB40C-210ENST00000566290 A0A1W2PN81 502 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 CHRNA7P36544 502 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 CEACAM3P40198 252 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 RPL8P62917 257 aaKnown RBP13.53□□□□□ -0.24
RAB40C-210ENST00000566290 RUNX1Q01196 453 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 PAX2Q02962 417 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 ZNF616Q08AN1 781 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 TUSC1Q2TAM9 212 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 KRTAP24-1Q3LI83 254 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 C2orf83Q53S99 150 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 OR8G2PQ6IF36 304 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 CLEC2AQ6UVW9 174 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 BPIFCQ8NFQ6 507 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 OR1L8Q8NGR8 309 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 FAM213BQ8TBF2 198 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 PLEKHA3Q9HB20 300 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 NDUFA4L2Q9NRX3 87 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 FBXO7Q9Y3I1 522 aa13.53□□□□□ -0.24
RAB40C-210ENST00000566290 IGHV1-3A0A0C4DH29 117 aa13.52□□□□□ -0.25
RAB40C-210ENST00000566290 FAM157AC9JC47 383 aa13.52□□□□□ -0.25
RAB40C-210ENST00000566290 C17orf112F2Z3M2 114 aa13.52□□□□□ -0.25
RAB40C-210ENST00000566290 IFNA10P01566 189 aa13.52□□□□□ -0.25
RAB40C-210ENST00000566290 H2AFB1P0C5Y9 115 aa13.52□□□□□ -0.25
RAB40C-210ENST00000566290 M6PRP20645 277 aa13.52□□□□□ -0.25
RAB40C-210ENST00000566290 NPY1RP25929 384 aa13.52□□□□□ -0.25
RAB40C-210ENST00000566290 TMEM41BQ5BJD5 291 aa13.52□□□□□ -0.25
RAB40C-210ENST00000566290 SPSB3Q6PJ21 355 aa13.52□□□□□ -0.25
RAB40C-210ENST00000566290 MRPL41Q8IXM3 137 aaKnown RBP13.52□□□□□ -0.25
RAB40C-210ENST00000566290 FAM168AQ92567 244 aa13.52□□□□□ -0.25
RAB40C-210ENST00000566290 YLPM1P49750 1951 aaKnown RBP13.52□□□□□ -0.25
RAB40C-210ENST00000566290 TEX50A0A1B0GTY4 177 aa13.51□□□□□ -0.25
RAB40C-210ENST00000566290 UBE2L5PA0A1B0GUS4 154 aa13.51□□□□□ -0.25
RAB40C-210ENST00000566290 CRYGBP07316 175 aa13.51□□□□□ -0.25
RAB40C-210ENST00000566290 CD1BP29016 333 aa13.51□□□□□ -0.25
RAB40C-210ENST00000566290 PDLIM4P50479 330 aa13.51□□□□□ -0.25
RAB40C-210ENST00000566290 PEA15Q15121 130 aa13.51□□□□□ -0.25
RAB40C-210ENST00000566290 TMEM249Q2WGJ8 235 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms