RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 C2orf88Q9BSF0 95 aa11.51□□□□□ -0.57
CX3CL1-204ENST00000565912 TRBV9A0A0B4J1U6 114 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 CGAP01215 116 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 IGFBP2P18065 325 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 CDKN1AP38936 164 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 PLSCR2Q9NRY7 297 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 KIF13BQ9NQT8 1826 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 NAT1P18440 290 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 IGLV3-21P80748 117 aaPredicted RBP11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 CHCHD2Q9Y6H1 151 aaPredicted RBP11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 RGPD3A6NKT7 1758 aaPredicted RBP11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 ZNF318Q5VUA4 2279 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 CD200R1LQ6Q8B3 271 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 PROB1E7EW31 1015 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 TDGF1P13385 188 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 OR13A1Q8NGR1 328 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 ZNF418Q8TF45 676 aaPredicted RBP11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 NPCDR1Q9BY65 106 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 SVILO95425 2214 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 C1QL2Q7Z5L3 287 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 SCGB3A1Q96QR1 104 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 UNC13CQ8NB66 2214 aa11.5□□□□□ -0.57
CX3CL1-204ENST00000565912 DOCK3Q8IZD9 2030 aa11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 SMIM13P0DJ93 91 aa11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 FAM57AQ8TBR7 257 aa11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 WDR90Q96KV7 1748 aa11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 MYO16Q9Y6X6 1858 aa11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 CXorf65A6NEN9 183 aa11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 TMEM250H0YL14 139 aa11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 TM4SF5O14894 197 aa11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 PGPEP1Q9NXJ5 209 aa11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 IGHV2OR16-5A0A0B4J2B6 119 aa11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 C17orf98A8MV24 154 aa11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 LDLRAD4O15165 306 aa11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 GPX4P36969 197 aaPredicted RBP11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 PRB3Q04118 309 aaPredicted RBP11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 MRPL20Q9BYC9 149 aaKnown RBP11.49□□□□□ -0.57
CX3CL1-204ENST00000565912 CFAP161Q6P656 301 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 RTN4RL2Q86UN3 420 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 GP6Q9HCN6 339 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 MRPL16Q9NX20 251 aaKnown RBP11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 PEX7O00628 323 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 ZNF708P17019 499 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 TFF3Q07654 80 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 PMCHL2Q9BQD1 86 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 NUDT11Q96G61 164 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 PSMG3Q9BT73 122 aaPredicted RBP11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 CBLN4Q9NTU7 201 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 SIPA1L1O43166 1804 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 KBTBD11-OT1A0A1B0GTJ5 212 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 ZNF815PA8K554 130 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 H3BRM9 83 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 APOHP02749 345 aaPredicted RBP11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 REPIN1Q9BWE0 567 aaKnown RBP11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 JKAMPQ9P055 326 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 A0A0G2JMM0 328 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 A0A1W2PPB8 328 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 A0A1W2PRS3 328 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 KIR3DP1A8MWS1 328 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 SLC17A3O00476 420 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 PEMTQ9UBM1 199 aa11.48□□□□□ -0.57
CX3CL1-204ENST00000565912 HOXA5P20719 270 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 MEF2CQ06413 473 aaPredicted RBP11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 OR52E5Q8NH55 327 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 RPRMQ9NS64 109 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 TBL2Q9Y4P3 447 aaKnown RBP11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 C1QTNF9BB2RNN3 333 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 FAM71F2Q6NXP2 309 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 COLCA1Q6ZS62 124 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 SOX21Q9Y651 276 aaPredicted RBP11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 GREB1LQ9C091 1923 aaPredicted RBP11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 MSGN1A6NI15 193 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 CEACAM1P13688 526 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 DDTP30046 118 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 Q5BKY6 102 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 C1orf162Q8NEQ5 155 aaPredicted RBP11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 WNT10AQ9GZT5 417 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 SNAI2O43623 268 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 GLMPQ8WWB7 406 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 SDF2L1Q9HCN8 221 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 PLXNA1Q9UIW2 1896 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 IGHV1-2P23083 117 aa11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 RCC1LQ96I51 464 aaKnown RBP11.47□□□□□ -0.57
CX3CL1-204ENST00000565912 IGKV3D-20A0A0C4DH25 116 aa11.46□□□□□ -0.57
CX3CL1-204ENST00000565912 TRBV7-9A0A0J9YWB2 115 aa11.46□□□□□ -0.57
CX3CL1-204ENST00000565912 CNTFRP26992 372 aa11.46□□□□□ -0.57
CX3CL1-204ENST00000565912 TBR1Q16650 682 aa11.46□□□□□ -0.57
CX3CL1-204ENST00000565912 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.46□□□□□ -0.57
CX3CL1-204ENST00000565912 NPIPB13A6NJU9 1138 aa11.46□□□□□ -0.57
CX3CL1-204ENST00000565912 PSG7Q13046 419 aa11.46□□□□□ -0.57
CX3CL1-204ENST00000565912 ZIC4Q8N9L1 334 aa11.46□□□□□ -0.57
CX3CL1-204ENST00000565912 OR11H4Q8NGC9 324 aa11.46□□□□□ -0.57
CX3CL1-204ENST00000565912 C10orf126Q8N4M7 172 aa11.46□□□□□ -0.58
CX3CL1-204ENST00000565912 IGKV1D-43A0A0B4J1Z2 117 aa11.46□□□□□ -0.58
CX3CL1-204ENST00000565912 MALP21145 153 aa11.46□□□□□ -0.58
CX3CL1-204ENST00000565912 GATA2P23769 480 aaPredicted RBP11.46□□□□□ -0.58
CX3CL1-204ENST00000565912 SCO2A0A1W2PP80 73 aa11.45□□□□□ -0.58
CX3CL1-204ENST00000565912 DPRXA6NFQ7 191 aa11.45□□□□□ -0.58
CX3CL1-204ENST00000565912 CELA3BP08861 270 aa11.45□□□□□ -0.58
CX3CL1-204ENST00000565912 VDAC2P45880 294 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms