RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 FAM110AQ9BQ89 295 aa13.1□□□□□ -0.31
MAP1LC3B-207ENST00000565788 QTRT1Q9BXR0 403 aaKnown RBP13.1□□□□□ -0.31
MAP1LC3B-207ENST00000565788 HIPK2Q9H2X6 1198 aa13.1□□□□□ -0.31
MAP1LC3B-207ENST00000565788 VCX3AQ9NNX9 186 aa13.1□□□□□ -0.31
MAP1LC3B-207ENST00000565788 MLXQ9UH92 298 aa13.1□□□□□ -0.31
MAP1LC3B-207ENST00000565788 EIF4EP06730 217 aaKnown RBP13.09□□□□□ -0.31
MAP1LC3B-207ENST00000565788 F2RP25116 425 aa13.09□□□□□ -0.31
MAP1LC3B-207ENST00000565788 TAS2R46P59540 309 aa13.09□□□□□ -0.31
MAP1LC3B-207ENST00000565788 ERVK-16P61578 105 aa13.09□□□□□ -0.31
MAP1LC3B-207ENST00000565788 TM4SF20Q53R12 229 aa13.09□□□□□ -0.31
MAP1LC3B-207ENST00000565788 ZNF57Q68EA5 555 aaPredicted RBP13.09□□□□□ -0.31
MAP1LC3B-207ENST00000565788 UXS1Q8NBZ7 420 aa13.09□□□□□ -0.31
MAP1LC3B-207ENST00000565788 IGHV3-35A0A0C4DH35 117 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 TEX50A0A1B0GTY4 177 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 TNFAIP8O95379 198 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 TRAPPC2P0DI81 140 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 TRAPPC2BP0DI82 140 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 PRSS3P35030 304 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 HRH1P35367 487 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 LPAR6P43657 344 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 WT1-ASQ06250 92 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 THOC7Q6I9Y2 204 aaKnown RBP13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 BTNL8Q6UX41 500 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 LYSMD2Q8IV50 215 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 GDPD1Q8N9F7 314 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 FCAMRQ8WWV6 532 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 SLC25A46Q96AG3 418 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 THYN1Q9P016 225 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 NSG2Q9Y328 171 aa13.08□□□□□ -0.32
MAP1LC3B-207ENST00000565788 LCE6AA0A183 80 aa13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 GPR31O00270 319 aa13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 SCAF4O95104 1147 aaKnown RBP13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 OR13C7P0DN81 318 aa13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 PTBP1P26599 531 aaKnown RBP eCLIP13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 HLA-DMAP28067 261 aa13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 G6PCP35575 357 aa13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 NCS1P62166 190 aa13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 ZNF585BQ52M93 769 aa13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 OR1L8Q8NGR8 309 aa13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 OR6F1Q8NGZ6 308 aa13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 GPX8Q8TED1 209 aa13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 DGCR14Q96DF8 476 aaKnown RBP13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 NDUFA4L2Q9NRX3 87 aa13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 COMMD3Q9UBI1 195 aa13.07□□□□□ -0.32
MAP1LC3B-207ENST00000565788 TGOLN2O43493 480 aa13.06□□□□□ -0.32
MAP1LC3B-207ENST00000565788 KRASP01116 189 aa13.06□□□□□ -0.32
MAP1LC3B-207ENST00000565788 SERPINE2P07093 398 aa13.06□□□□□ -0.32
MAP1LC3B-207ENST00000565788 MFAP2P55001 183 aa13.06□□□□□ -0.32
MAP1LC3B-207ENST00000565788 SLC25A24Q6NUK1 477 aa13.06□□□□□ -0.32
MAP1LC3B-207ENST00000565788 PLET1Q6UQ28 207 aa13.06□□□□□ -0.32
MAP1LC3B-207ENST00000565788 SLC16A13Q7RTY0 426 aa13.06□□□□□ -0.32
MAP1LC3B-207ENST00000565788 HSD17B13Q7Z5P4 300 aaPredicted RBP13.06□□□□□ -0.32
MAP1LC3B-207ENST00000565788 CMTM1Q8IZ96 169 aa13.06□□□□□ -0.32
MAP1LC3B-207ENST00000565788 VN1R17PQ8TDU5 208 aa13.06□□□□□ -0.32
MAP1LC3B-207ENST00000565788 HINT2Q9BX68 163 aa13.06□□□□□ -0.32
MAP1LC3B-207ENST00000565788 ZNF436Q9C0F3 470 aaPredicted RBP13.06□□□□□ -0.32
MAP1LC3B-207ENST00000565788 DNAH1Q9P2D7 4330 aa13.06□□□□□ -0.32
MAP1LC3B-207ENST00000565788 IGHV3-21A0A0B4J1V1 117 aa13.05□□□□□ -0.32
MAP1LC3B-207ENST00000565788 C8orf88P0DMB2 117 aa13.05□□□□□ -0.32
MAP1LC3B-207ENST00000565788 VBP1P61758 197 aa13.05□□□□□ -0.32
MAP1LC3B-207ENST00000565788 PHLDA2Q53GA4 152 aa13.05□□□□□ -0.32
MAP1LC3B-207ENST00000565788 SNX29P2Q8IUI4 249 aa13.05□□□□□ -0.32
MAP1LC3B-207ENST00000565788 OR52B4Q8NGK2 314 aa13.05□□□□□ -0.32
MAP1LC3B-207ENST00000565788 LSM10Q969L4 123 aaKnown RBP13.05□□□□□ -0.32
MAP1LC3B-207ENST00000565788 FUNDC2Q9BWH2 189 aa13.05□□□□□ -0.32
MAP1LC3B-207ENST00000565788 OR51B2Q9Y5P1 312 aa13.05□□□□□ -0.32
MAP1LC3B-207ENST00000565788 F11RQ9Y624 299 aaKnown RBP13.05□□□□□ -0.32
MAP1LC3B-207ENST00000565788 OR2T8A6NH00 312 aa13.04□□□□□ -0.32
MAP1LC3B-207ENST00000565788 DBX1A6NMT0 343 aa13.04□□□□□ -0.32
MAP1LC3B-207ENST00000565788 CYB5BO43169 146 aa13.04□□□□□ -0.32
MAP1LC3B-207ENST00000565788 SNAPC5O75971 98 aa13.04□□□□□ -0.32
MAP1LC3B-207ENST00000565788 ELLP55199 621 aaPredicted RBP13.04□□□□□ -0.32
MAP1LC3B-207ENST00000565788 CADM3Q8N126 398 aa13.04□□□□□ -0.32
MAP1LC3B-207ENST00000565788 TMEM190Q8WZ59 177 aa13.04□□□□□ -0.32
MAP1LC3B-207ENST00000565788 MARC2Q969Z3 335 aa13.04□□□□□ -0.32
MAP1LC3B-207ENST00000565788 MRPL27Q9P0M9 148 aaKnown RBP13.04□□□□□ -0.32
MAP1LC3B-207ENST00000565788 UFC1Q9Y3C8 167 aa13.04□□□□□ -0.32
MAP1LC3B-207ENST00000565788 APOA1P02647 267 aa13.03□□□□□ -0.32
MAP1LC3B-207ENST00000565788 TSPAN5P62079 268 aa13.03□□□□□ -0.32
MAP1LC3B-207ENST00000565788 TBC1D26Q86UD7 250 aa13.03□□□□□ -0.32
MAP1LC3B-207ENST00000565788 CMTM3Q96MX0 182 aa13.03□□□□□ -0.32
MAP1LC3B-207ENST00000565788 PRNDQ9UKY0 176 aa13.03□□□□□ -0.32
MAP1LC3B-207ENST00000565788 TRAV25A0A0B4J276 109 aa13.02□□□□□ -0.33
MAP1LC3B-207ENST00000565788 F8W735 103 aaPredicted RBP13.02□□□□□ -0.33
MAP1LC3B-207ENST00000565788 HPGDSO60760 199 aa13.02□□□□□ -0.33
MAP1LC3B-207ENST00000565788 ELK1P19419 428 aa13.02□□□□□ -0.33
MAP1LC3B-207ENST00000565788 RCVRNP35243 200 aa13.02□□□□□ -0.33
MAP1LC3B-207ENST00000565788 RBPMS2Q6ZRY4 209 aaKnown RBP13.02□□□□□ -0.33
MAP1LC3B-207ENST00000565788 SCARB1Q8WTV0 552 aa13.02□□□□□ -0.33
MAP1LC3B-207ENST00000565788 BSCL2Q96G97 398 aaPredicted RBP13.02□□□□□ -0.33
MAP1LC3B-207ENST00000565788 CHRDL1Q9BU40 450 aa13.02□□□□□ -0.33
MAP1LC3B-207ENST00000565788 SCPEP1Q9HB40 452 aa13.02□□□□□ -0.33
MAP1LC3B-207ENST00000565788 C21orf62Q9NYP8 219 aa13.02□□□□□ -0.33
MAP1LC3B-207ENST00000565788 HYDINQ4G0P3 5121 aa13.01□□□□□ -0.33
MAP1LC3B-207ENST00000565788 SMIM31A0A1B0GVY4 71 aa13.01□□□□□ -0.33
MAP1LC3B-207ENST00000565788 C15orf61A6NNL5 157 aa13.01□□□□□ -0.33
MAP1LC3B-207ENST00000565788 K7EIM0 57 aa13.01□□□□□ -0.33
MAP1LC3B-207ENST00000565788 IGKV1-39P01597 117 aa13.01□□□□□ -0.33
MAP1LC3B-207ENST00000565788 IGKV1D-39P04432 117 aa13.01□□□□□ -0.33
MAP1LC3B-207ENST00000565788 ANKRD55Q3KP44 614 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms