RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 UNQ9165/PRO28630Q6UXU0 137 aa11.78□□□□□ -0.52
CDH3-204ENST00000565453 GDPD1Q8N9F7 314 aa11.78□□□□□ -0.52
CDH3-204ENST00000565453 WFDC10AQ9H1F0 79 aa11.78□□□□□ -0.52
CDH3-204ENST00000565453 SCPEP1Q9HB40 452 aa11.78□□□□□ -0.52
CDH3-204ENST00000565453 NDUFA4L2Q9NRX3 87 aa11.78□□□□□ -0.52
CDH3-204ENST00000565453 SLC2A8Q9NY64 477 aa11.78□□□□□ -0.52
CDH3-204ENST00000565453 MLXQ9UH92 298 aa11.78□□□□□ -0.52
CDH3-204ENST00000565453 TPPPO94811 219 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 SERPINE2P07093 398 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 TRAPPC2P0DI81 140 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 TRAPPC2BP0DI82 140 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 C8orf88P0DMB2 117 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 OR13C7P0DN81 318 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 GPR183P32249 361 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 MFAP2P55001 183 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 ERVK-16P61578 105 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 HSD17B13Q7Z5P4 300 aaPredicted RBP11.77□□□□□ -0.53
CDH3-204ENST00000565453 CMTM1Q8IZ96 169 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 DEFB125Q8N687 156 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 UXS1Q8NBZ7 420 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 OR1L8Q8NGR8 309 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 NSG2Q9Y328 171 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 SELENOKQ9Y6D0 94 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 CEPT1Q9Y6K0 416 aa11.77□□□□□ -0.53
CDH3-204ENST00000565453 ZNF320A2RRD8 509 aa11.76□□□□□ -0.53
CDH3-204ENST00000565453 RBMY1BA6NDE4 496 aaKnown RBP11.76□□□□□ -0.53
CDH3-204ENST00000565453 RBMY1EA6NEQ0 496 aaKnown RBP11.76□□□□□ -0.53
CDH3-204ENST00000565453 HPGDSO60760 199 aa11.76□□□□□ -0.53
CDH3-204ENST00000565453 KRASP01116 189 aa11.76□□□□□ -0.53
CDH3-204ENST00000565453 RBMY1DP0C7P1 496 aaKnown RBP11.76□□□□□ -0.53
CDH3-204ENST00000565453 ELK1P19419 428 aa11.76□□□□□ -0.53
CDH3-204ENST00000565453 G6PCP35575 357 aa11.76□□□□□ -0.53
CDH3-204ENST00000565453 GUCA2BQ16661 112 aa11.76□□□□□ -0.53
CDH3-204ENST00000565453 TM4SF20Q53R12 229 aa11.76□□□□□ -0.53
CDH3-204ENST00000565453 SNX29P2Q8IUI4 249 aa11.76□□□□□ -0.53
CDH3-204ENST00000565453 TMEM61Q8N0U2 210 aa11.76□□□□□ -0.53
CDH3-204ENST00000565453 VN1R17PQ8TDU5 208 aa11.76□□□□□ -0.53
CDH3-204ENST00000565453 ISOC1Q96CN7 298 aa11.76□□□□□ -0.53
CDH3-204ENST00000565453 ZNF436Q9C0F3 470 aaPredicted RBP11.76□□□□□ -0.53
CDH3-204ENST00000565453 HIPK2Q9H2X6 1198 aa11.76□□□□□ -0.53
CDH3-204ENST00000565453 THYN1Q9P016 225 aa11.76□□□□□ -0.53
CDH3-204ENST00000565453 SMIM31A0A1B0GVY4 71 aa11.75□□□□□ -0.53
CDH3-204ENST00000565453 DBX1A6NMT0 343 aa11.75□□□□□ -0.53
CDH3-204ENST00000565453 OR11H12B2RN74 326 aa11.75□□□□□ -0.53
CDH3-204ENST00000565453 RCVRNP35243 200 aa11.75□□□□□ -0.53
CDH3-204ENST00000565453 PHLDA2Q53GA4 152 aa11.75□□□□□ -0.53
CDH3-204ENST00000565453 ZNF57Q68EA5 555 aaPredicted RBP11.75□□□□□ -0.53
CDH3-204ENST00000565453 LSM10Q969L4 123 aaKnown RBP11.75□□□□□ -0.53
CDH3-204ENST00000565453 NAA50Q9GZZ1 169 aaKnown RBP11.75□□□□□ -0.53
CDH3-204ENST00000565453 RETNQ9HD89 108 aa11.75□□□□□ -0.53
CDH3-204ENST00000565453 FAM212BQ9NTI7 297 aaPredicted RBP11.75□□□□□ -0.53
CDH3-204ENST00000565453 OR51B2Q9Y5P1 312 aa11.75□□□□□ -0.53
CDH3-204ENST00000565453 F11RQ9Y624 299 aaKnown RBP11.75□□□□□ -0.53
CDH3-204ENST00000565453 F8W735 103 aaPredicted RBP11.74□□□□□ -0.53
CDH3-204ENST00000565453 TGOLN2O43493 480 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 IGKV1-39P01597 117 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 IGKV1D-39P04432 117 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 IFNA6P05013 189 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 SMIM18P0DKX4 95 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 ELLP55199 621 aaPredicted RBP11.74□□□□□ -0.53
CDH3-204ENST00000565453 UCP3P55916 312 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 ZFAND6Q6FIF0 208 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 SLC25A24Q6NUK1 477 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 LPCAT3Q6P1A2 487 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 PLET1Q6UQ28 207 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 BTNL8Q6UX41 500 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 MARC2Q969Z3 335 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 SRD5A3Q9H8P0 318 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 PALMDQ9NP74 551 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 TMEM14BQ9NUH8 114 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 PRNDQ9UKY0 176 aa11.74□□□□□ -0.53
CDH3-204ENST00000565453 IGHV3-35A0A0C4DH35 117 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 C15orf61A6NNL5 157 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 CYB5BO43169 146 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 SNAPC5O75971 98 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 GABARAPO95166 117 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 RORCP51449 518 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 TSPAN5P62079 268 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 CTF1Q16619 201 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 TBC1D26Q86UD7 250 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 OR5B3Q8NH48 314 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 TMEM190Q8WZ59 177 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 ZNF414Q96IQ9 312 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 SEC22AQ96IW7 307 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 ATP6V0BQ99437 205 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 HINT2Q9BX68 163 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 MRPL27Q9P0M9 148 aaKnown RBP11.73□□□□□ -0.53
CDH3-204ENST00000565453 UFC1Q9Y3C8 167 aa11.73□□□□□ -0.53
CDH3-204ENST00000565453 CSMD3Q7Z407 3707 aa11.72□□□□□ -0.53
CDH3-204ENST00000565453 TRAV25A0A0B4J276 109 aa11.72□□□□□ -0.53
CDH3-204ENST00000565453 K7EIM0 57 aa11.72□□□□□ -0.53
CDH3-204ENST00000565453 SCAF4O95104 1147 aaKnown RBP11.72□□□□□ -0.53
CDH3-204ENST00000565453 SLC16A13Q7RTY0 426 aa11.72□□□□□ -0.53
CDH3-204ENST00000565453 SLC38A6Q8IZM9 456 aa11.72□□□□□ -0.53
CDH3-204ENST00000565453 SCARB1Q8WTV0 552 aa11.72□□□□□ -0.53
CDH3-204ENST00000565453 BSCL2Q96G97 398 aaPredicted RBP11.72□□□□□ -0.53
CDH3-204ENST00000565453 TSC22D3Q99576 134 aa11.72□□□□□ -0.53
CDH3-204ENST00000565453 FAM110AQ9BQ89 295 aa11.72□□□□□ -0.53
CDH3-204ENST00000565453 CHRDL1Q9BU40 450 aa11.72□□□□□ -0.53
CDH3-204ENST00000565453 FKBP11Q9NYL4 201 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms