RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SCGB3A2Q96PL1 93 aa6.72□□□□□ -1.33
VPS9D1-205ENST00000565452 HSD17B10Q99714 261 aaKnown RBP6.72□□□□□ -1.33
VPS9D1-205ENST00000565452 PRRT1Q99946 306 aa6.72□□□□□ -1.33
VPS9D1-205ENST00000565452 AIFM2Q9BRQ8 373 aa6.72□□□□□ -1.33
VPS9D1-205ENST00000565452 ZNF2Q9BSG1 426 aaPredicted RBP6.72□□□□□ -1.33
VPS9D1-205ENST00000565452 TINAGL1Q9GZM7 467 aaPredicted RBP6.72□□□□□ -1.33
VPS9D1-205ENST00000565452 OR2D2Q9H210 308 aa6.72□□□□□ -1.33
VPS9D1-205ENST00000565452 SCRT2Q9NQ03 307 aa6.72□□□□□ -1.33
VPS9D1-205ENST00000565452 ZC4H2Q9NQZ6 224 aa6.72□□□□□ -1.33
VPS9D1-205ENST00000565452 SDHAF2Q9NX18 166 aa6.72□□□□□ -1.33
VPS9D1-205ENST00000565452 SCP2D1Q9UJQ7 156 aa6.72□□□□□ -1.33
VPS9D1-205ENST00000565452 UBR4Q5T4S7 5183 aa6.72□□□□□ -1.33
VPS9D1-205ENST00000565452 KIR2DL5BA0A0G2JN68 375 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 KIR2DL5BA0A0G2JPC4 375 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 NAP1L6A6NFF2 107 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 CENPXA8MT69 81 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 PROP1O75360 226 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 APOA2P02652 100 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 CT45A6P0DMU7 189 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 CT45A5P0DMU8 189 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 CT45A7P0DMV0 189 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 FOLR2P14207 255 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 INPP1P49441 399 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 KIR2DL5AQ8N109 375 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 BVESQ8NE79 360 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 KIR2DL5BQ8NHK3 375 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 ZFAND1Q8TCF1 268 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 TMEM68Q96MH6 324 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 CLCC1Q96S66 551 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 C7orf50Q9BRJ6 194 aaKnown RBP6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 CCDC32Q9BV29 185 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 MRPL20Q9BYC9 149 aaKnown RBP6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 WDR12Q9GZL7 423 aaKnown RBP6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 SRRQ9GZT4 340 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 SLC5A7Q9GZV3 580 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 FAM212BQ9NTI7 297 aaPredicted RBP6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 PRELID3BQ9Y3B1 194 aa6.71□□□□□ -1.34
VPS9D1-205ENST00000565452 DMBT1Q9UGM3 2413 aaPredicted RBP6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 C11orf94C9JXX5 98 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 M0R2N4 97 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 TRBV12-3P01733 135 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 CTRB1P17538 263 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 GNRHRP30968 328 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 DUTP33316 252 aaKnown RBP6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 LGALS7P47929 136 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 CATR1Q13166 79 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 ZNF846Q147U1 533 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 FXYD3Q14802 87 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 SURF2Q15527 256 aaPredicted RBP6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 RTL8BQ17RB0 113 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 LGALS9BQ3B8N2 356 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 TM4SF20Q53R12 229 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 SOHLH1Q5JUK2 328 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 TRIQKQ629K1 86 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 CTRB2Q6GPI1 263 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 LHFPL1Q86WI0 220 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 PDPNQ86YL7 162 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 SLC38A6Q8IZM9 456 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 CD300LFQ8TDQ1 290 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 SECTM1Q8WVN6 248 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 PARP12Q9H0J9 701 aaKnown RBP6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 AKIP1Q9NQ31 210 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 WASHC3Q9Y3C0 194 aa6.7□□□□□ -1.34
VPS9D1-205ENST00000565452 IGKV1D-13A0A0B4J2D9 117 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 C2orf70A6NJV1 201 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 H0YJW9 148 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 M0QYG6 137 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 M0R1X1 148 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 GPR31O00270 319 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 RBFOX2O43251 390 aaKnown RBP eCLIP6.69□□□□□ -1.342e-7■■■■□ 26
VPS9D1-205ENST00000565452 B3GALNT1O75752 331 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 ZNF735P0CB33 412 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 IGKV1-13P0DP09 117 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 MFAP2P55001 183 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 FXYD4P59646 89 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 RND3P61587 244 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 KLF9Q13886 244 aaPredicted RBP6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 RBMY1FQ15415 496 aaKnown RBP6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 RPL39P5Q59GN2 51 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 RNASE12Q5GAN4 147 aaKnown RBP6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 AADACL3Q5VUY0 350 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 ZNF57Q68EA5 555 aaPredicted RBP6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 CADM3Q8N126 398 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 MFSD4AQ8N468 514 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 POM121L12Q8N7R1 296 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 OR4C16Q8NGL9 310 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 GRPEL2Q8TAA5 225 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 OSR1Q8TAX0 266 aaPredicted RBP6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 TRIM63Q969Q1 353 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 TSNAXQ99598 290 aaKnown RBP6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 RARRES2Q99969 163 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 SLC25A21Q9BQT8 299 aaPredicted RBP6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 CCL28Q9NRJ3 127 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 SLC35D1Q9NTN3 355 aa6.69□□□□□ -1.34
VPS9D1-205ENST00000565452 PIGBOS1A0A0B4J2F0 54 aa6.68□□□□□ -1.34
VPS9D1-205ENST00000565452 C16orf90A8MZG2 172 aa6.68□□□□□ -1.34
VPS9D1-205ENST00000565452 H7C2Y5 167 aa6.68□□□□□ -1.34
VPS9D1-205ENST00000565452 J3QRK9 145 aa6.68□□□□□ -1.34
VPS9D1-205ENST00000565452 SPDEFO95238 335 aa6.68□□□□□ -1.34
VPS9D1-205ENST00000565452 CA2P00918 260 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms