RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 OR2B8PP59922 312 aa5.29□□□□□ -1.56
VPS4A-203ENST00000564399 SSX1Q16384 188 aa5.29□□□□□ -1.56
VPS4A-203ENST00000564399 C12orf74Q32Q52 190 aa5.29□□□□□ -1.56
VPS4A-203ENST00000564399 Q56UQ5 140 aa5.29□□□□□ -1.56
VPS4A-203ENST00000564399 LIPKQ5VXJ0 399 aa5.29□□□□□ -1.56
VPS4A-203ENST00000564399 Q6ZR54 194 aa5.29□□□□□ -1.56
VPS4A-203ENST00000564399 Q6ZRM9 215 aa5.29□□□□□ -1.56
VPS4A-203ENST00000564399 GIMAP1Q8WWP7 306 aa5.29□□□□□ -1.56
VPS4A-203ENST00000564399 FAM3DQ96BQ1 224 aa5.29□□□□□ -1.56
VPS4A-203ENST00000564399 HSD17B10Q99714 261 aaKnown RBP5.29□□□□□ -1.56
VPS4A-203ENST00000564399 COMMD5Q9GZQ3 224 aa5.29□□□□□ -1.56
VPS4A-203ENST00000564399 SMPD3Q9NY59 655 aaPredicted RBP5.29□□□□□ -1.56
VPS4A-203ENST00000564399 C21orf62Q9NYP8 219 aa5.29□□□□□ -1.56
VPS4A-203ENST00000564399 TAS2R8Q9NYW2 309 aa5.29□□□□□ -1.56
VPS4A-203ENST00000564399 KCNK7Q9Y2U2 307 aa5.29□□□□□ -1.56
VPS4A-203ENST00000564399 AK6Q9Y3D8 172 aaKnown RBP5.29□□□□□ -1.56
VPS4A-203ENST00000564399 OR2W1Q9Y3N9 320 aa5.29□□□□□ -1.56
VPS4A-203ENST00000564399 ERICH4A6NGS2 130 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 HLA-DQB1P01920 261 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 EIF4EP06730 217 aaKnown RBP5.28□□□□□ -1.56
VPS4A-203ENST00000564399 UCHL1P09936 223 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 OR13C7P0DN81 318 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 CD37P11049 281 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 RPL11P62913 178 aaKnown RBP5.28□□□□□ -1.56
VPS4A-203ENST00000564399 C2orf76Q3KRA6 126 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 TIMM50Q3ZCQ8 353 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 TMEM41BQ5BJD5 291 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 ZFP1Q6P2D0 407 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 AHSA2Q719I0 299 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 TCF24Q7RTU0 167 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 MFSD4AQ8N468 514 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 GDPD1Q8N9F7 314 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 OR10W1Q8NGF6 305 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 SCARB1Q8WTV0 552 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 CYGBQ8WWM9 190 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 GPHA2Q96T91 129 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 GFI1Q99684 422 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 AIFM2Q9BRQ8 373 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 SCRT1Q9BWW7 348 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 CLEC5AQ9NY25 188 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 BET1LQ9NYM9 111 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 RAB22AQ9UL26 194 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 TBC1D24Q9ULP9 559 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 CELA1Q9UNI1 258 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 X6R8D5 127 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 PKD1P98161 4303 aa5.28□□□□□ -1.56
VPS4A-203ENST00000564399 IGKV1D-8A0A087WSZ0 117 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 TRAV14DV4A0A0A6YYC5 116 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 TRAV3A0A0B4J244 114 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 IGKV1D-13A0A0B4J2D9 117 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 TMEM272A0A1B0GTI8 110 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 ZNF705EA8MWA4 302 aaPredicted RBP5.27□□□□□ -1.57
VPS4A-203ENST00000564399 LCE2BO14633 110 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 NUPL2O15504 423 aaKnown RBP5.27□□□□□ -1.57
VPS4A-203ENST00000564399 ATP5HO75947 161 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 DFFBO76075 338 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 CD5P06127 495 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 SERPINE2P07093 398 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 CTXN2P0C2S0 81 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 IGKV1-13P0DP09 117 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 RANBP1P43487 201 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 BRWD1-AS2P59051 145 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 RELQ04864 619 aaPredicted RBP5.27□□□□□ -1.57
VPS4A-203ENST00000564399 FAM90A2PQ658T7 463 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 MORN3Q6PF18 240 aaPredicted RBP5.27□□□□□ -1.57
VPS4A-203ENST00000564399 SPAG16Q8N0X2 631 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 NANOGP1Q8N7R0 232 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 OR10R2Q8NGX6 335 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 TMEM203Q969S6 136 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 ATP6V0BQ99437 205 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 SRSF8Q9BRL6 282 aaKnown RBP5.27□□□□□ -1.57
VPS4A-203ENST00000564399 HINT2Q9BX68 163 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 QTRT1Q9BXR0 403 aaKnown RBP5.27□□□□□ -1.57
VPS4A-203ENST00000564399 MS4A6AQ9H2W1 248 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 TMEM14BQ9NUH8 114 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 RABAC1Q9UI14 185 aa5.27□□□□□ -1.57
VPS4A-203ENST00000564399 HSPG2P98160 4391 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 J3QL48 77 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 UPK2O00526 184 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 MFNGO00587 321 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 ST8SIA3O43173 380 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 TNFSF12O43508 249 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 IGLV2-14P01704 120 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 CD74P04233 296 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 CTSGP08311 255 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 GIG44P09565 113 aaPredicted RBP5.26□□□□□ -1.57
VPS4A-203ENST00000564399 TRAPPC2P0DI81 140 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 TRAPPC2BP0DI82 140 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 SPP1P10451 314 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 HIST1H1DP16402 221 aaKnown RBP5.26□□□□□ -1.57
VPS4A-203ENST00000564399 TNP2Q05952 138 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 WT1-ASQ06250 92 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 HES5Q5TA89 166 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 THOC7Q6I9Y2 204 aaKnown RBP5.26□□□□□ -1.57
VPS4A-203ENST00000564399 ZNF66Q6ZN08 573 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 Q6ZS49 121 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 HSD17B13Q7Z5P4 300 aaPredicted RBP5.26□□□□□ -1.57
VPS4A-203ENST00000564399 DUSP18Q8NEJ0 188 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 DMBX1Q8NFW5 382 aa5.26□□□□□ -1.57
VPS4A-203ENST00000564399 DGCR14Q96DF8 476 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms