RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 SDHCQ99643 169 aaPredicted RBP7.57□□□□□ -1.2
SF3B3-204ENST00000563739 CCDC32Q9BV29 185 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 FBXL7Q9UJT9 491 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 V9GYH0 126 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 MYCBP2O75592 4640 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 FAT1Q14517 4588 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 IGLV11-55A0A075B6I3 123 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 TRBV6-7A0A0A0MS04 114 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 A0A0A6YYH2 397 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 TMEM235A6NFC5 223 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 A6NJ64 397 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 NPIPB5A8MRT5 1133 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 DEFB4AO15263 64 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 CRYGCP07315 174 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 FCGR3AP08637 254 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 RPL30P62888 115 aaKnown RBP7.56□□□□□ -1.2
SF3B3-204ENST00000563739 MRPS15P82914 257 aaKnown RBP7.56□□□□□ -1.2
SF3B3-204ENST00000563739 OXA1LQ15070 435 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 CDK10Q15131 360 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 FAM209BQ5JX69 171 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 OR2C3Q8N628 320 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 SAMD12Q8N8I0 201 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 SPAG8Q99932 426 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-204ENST00000563739 SOSTQ9BQB4 213 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 COMMD3Q9UBI1 195 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 FBXL17Q9UF56 701 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 MGAT4AQ9UM21 535 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 ZNF257Q9Y2Q1 563 aa7.56□□□□□ -1.2
SF3B3-204ENST00000563739 IGKV1D-8A0A087WSZ0 117 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 IGHV3-35A0A0C4DH35 117 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 FABP12A6NFH5 140 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 TSPAN4O14817 238 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 HPGDSO60760 199 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 IGLV2-14P01704 120 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 ZNF735P0CB33 412 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 PTBP1P26599 531 aaKnown RBP eCLIP7.55□□□□□ -1.2
SF3B3-204ENST00000563739 EIF4EBP1Q13541 118 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-204ENST00000563739 ARFRP1Q13795 201 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 RBMS2Q15434 407 aaKnown RBP7.55□□□□□ -1.2
SF3B3-204ENST00000563739 ZNF79Q15937 498 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 TRIM16LQ309B1 348 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 VMA21Q3ZAQ7 101 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 CDNFQ49AH0 187 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 ZNF585BQ52M93 769 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 HACD4Q5VWC8 232 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 VKORC1L1Q8N0U8 176 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 PUSL1Q8N0Z8 303 aaKnown RBP7.55□□□□□ -1.2
SF3B3-204ENST00000563739 ZNF502Q8TBZ5 544 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 NUDCD2Q8WVJ2 157 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 MAFIPQ8WZ33 124 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 TMEM190Q8WZ59 177 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 DIRAS2Q96HU8 199 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 ZNF436Q9C0F3 470 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-204ENST00000563739 SRRQ9GZT4 340 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 PGPEP1Q9NXJ5 209 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 ELF5Q9UKW6 265 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-204ENST00000563739 AGRNO00468 2067 aa7.55□□□□□ -1.2
SF3B3-204ENST00000563739 TRAV18A0A075B6X5 111 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 ZNF320A2RRD8 509 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 TRDCB7Z8K6 153 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 F8W735 103 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-204ENST00000563739 MPPED1O15442 326 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 FABP7O15540 132 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 XRCC3O43542 346 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 APOA1P02647 267 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 EIF4EP06730 217 aaKnown RBP7.54□□□□□ -1.2
SF3B3-204ENST00000563739 GSTT2P0CG29 244 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 GSTT2BP0CG30 244 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 DTYMKP23919 212 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 TALDO1P37837 337 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 GNG2P59768 71 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 TMEM69Q5SWH9 247 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 CNIH2Q6PI25 160 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 Q6ZS49 121 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 APRG1Q8IVJ8 170 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 TMEM217Q8N7C4 229 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 STPG3Q8N7X2 389 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 GDPD1Q8N9F7 314 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 Q8NAQ8 132 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 C11orf45Q8TAV5 145 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 OSR1Q8TAX0 266 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-204ENST00000563739 C2CD4CQ8TF44 421 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 CMTM3Q96MX0 182 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 FYTTD1Q96QD9 318 aaKnown RBP7.54□□□□□ -1.2
SF3B3-204ENST00000563739 SPIN2AQ99865 258 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 SPIN2BQ9BPZ2 258 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 SCRT1Q9BWW7 348 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 C5orf66Q9H5L9 145 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 AUNIPQ9H7T9 357 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 DIABLOQ9NR28 239 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 NACAE9PAV3 2078 aa7.54□□□□□ -1.2
SF3B3-204ENST00000563739 hCG_2014768A0A024R1R8 64 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 PRSS29PA6NIE9 313 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 BET1O15155 118 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 SSX5O60225 188 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 REG1AP05451 166 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 GIG44P09565 113 aaPredicted RBP7.53□□□□□ -1.2
SF3B3-204ENST00000563739 PSMB6P28072 239 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 MFAP2P55001 183 aa7.53□□□□□ -1.2
SF3B3-204ENST00000563739 TCTAP57738 103 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms