RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 A0A0J9YWU9 116 aa12.41□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 MEIS3P1A6NDR6 274 aa12.41□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 FGF2P09038 288 aa12.41□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 AADACL3Q5VUY0 350 aa12.41□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 GDPD1Q8N9F7 314 aa12.41□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 VN1R17PQ8TDU5 208 aa12.41□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 SPAG8Q99932 426 aaPredicted RBP12.41□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 C5orf66Q9H5L9 145 aa12.41□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 UBQLN2Q9UHD9 624 aa12.41□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 KMT2AQ03164 3969 aa12.41□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 LOC100506127A0A0U1RQW1 187 aa12.4□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 TEX50A0A1B0GTY4 177 aa12.4□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 OR2T8A6NH00 312 aa12.4□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 SERPINE2P07093 398 aa12.4□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 GNRHRP30968 328 aa12.4□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 MFAP2P55001 183 aa12.4□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 PMS2P11Q13670 270 aa12.4□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 WFDC3Q8IUB2 231 aa12.4□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 CD300LFQ8TDQ1 290 aa12.4□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 COMMD9Q9P000 198 aa12.4□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 CXorf65A6NEN9 183 aa12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 MARCH11A6NNE9 402 aa12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 F8W735 103 aaPredicted RBP12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 TSPAN4O14817 238 aa12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 TRAPPC2P0DI81 140 aa12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 TRAPPC2BP0DI82 140 aa12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 OR13C7P0DN81 318 aa12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 TNFRSF9Q07011 255 aa12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 DEFB135Q30KP9 77 aa12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 ODF3L2Q3SX64 289 aa12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 Q6ZWC4 215 aa12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 LYG2Q86SG7 212 aa12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 SLC38A6Q8IZM9 456 aa12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 DAZ1Q9NQZ3 744 aaKnown RBP12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 DIABLOQ9NR28 239 aa12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 TP53TG1Q9Y2A0 90 aa12.39□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 IGHV3-21A0A0B4J1V1 117 aa12.38□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 SPRY2O43597 315 aa12.38□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 RLN1P04808 185 aa12.38□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 CBX5P45973 191 aa12.38□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 APOC4P55056 127 aa12.38□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 HERV-K104P61576 105 aa12.38□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 THOC7Q6I9Y2 204 aaKnown RBP12.38□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 SLC25A24Q6NUK1 477 aa12.38□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 HSD17B13Q7Z5P4 300 aaPredicted RBP12.38□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 BSCL2Q96G97 398 aaPredicted RBP12.38□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 CHRDL1Q9BU40 450 aa12.38□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 NDUFA4L2Q9NRX3 87 aa12.38□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 EHFQ9NZC4 300 aa12.38□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 IGHV3OR16-8A0A075B7F1 116 aa12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 CYB5BO43169 146 aa12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 PGLYRP1O75594 196 aaPredicted RBP12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 LY6G6CO95867 125 aa12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 BMI1P35226 326 aa12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 ADMP35318 185 aa12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 RFX2P48378 723 aa12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 DHRS11Q6UWP2 260 aa12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 OR1L8Q8NGR8 309 aa12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 SCARB1Q8WTV0 552 aa12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 FCAMRQ8WWV6 532 aa12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 MOB3AQ96BX8 217 aa12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 ZNF414Q96IQ9 312 aa12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 YTHDF1Q9BYJ9 559 aaKnown RBP12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 NSG2Q9Y328 171 aa12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 F11RQ9Y624 299 aaKnown RBP12.37□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 NUPR2A6NF83 97 aa12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 K7EIM0 57 aa12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 NDUFA4O00483 81 aa12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 XRCC3O43542 346 aa12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 ZNF207O43670 478 aaKnown RBP12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 ATP6V1G2O95670 118 aa12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 F2RP25116 425 aa12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 G6PCP35575 357 aa12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 ERVK-16P61578 105 aa12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 SPSB3Q6PJ21 355 aa12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 LSM10Q969L4 123 aaKnown RBP12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 ZNF2Q9BSG1 426 aaPredicted RBP12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 C20orf24Q9BUV8 137 aa12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 HINT2Q9BX68 163 aa12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 IFT46Q9NQC8 304 aa12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 C21orf62Q9NYP8 219 aa12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 ANAPC10Q9UM13 185 aa12.36□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 DBX1A6NMT0 343 aa12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 UBE2CO00762 179 aa12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 KRASP01116 189 aa12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 PMP2P02689 132 aa12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 TGFBR1P36897 503 aa12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 LPAR6P43657 344 aa12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 NEDD8Q15843 81 aa12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 LAMTOR1Q6IAA8 161 aa12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 UBAC2Q8NBM4 344 aa12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 BORCS5Q969J3 196 aa12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 RNF183Q96D59 192 aa12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 DGCR14Q96DF8 476 aaKnown RBP12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 ATP6V0BQ99437 205 aa12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 FXYD6Q9H0Q3 95 aa12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 OR51B2Q9Y5P1 312 aa12.35□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 KIR2DL5BA0A0G2JN68 375 aa12.34□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 KIR2DL5BA0A0G2JPC4 375 aa12.34□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 RPL35AP18077 110 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms