RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 ZNF320A2RRD8 509 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 MARCH11A6NNE9 402 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 GPR31O00270 319 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 KRASP01116 189 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 APOA1P02647 267 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 CBLN1P23435 193 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 LPAR6P43657 344 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 CD81P60033 236 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 ERVK-16P61578 105 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 FAM106AQ4KMX7 169 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 SNX29P2Q8IUI4 249 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 CMTM1Q8IZ96 169 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 DYNLRB2Q8TF09 96 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 CACNG8Q8WXS5 425 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 CXorf58Q96LI9 332 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 CMTM3Q96MX0 182 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 NEURL2Q9BR09 285 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 FXYD6Q9H0Q3 95 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 ZC4H2Q9NQZ6 224 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 TECRQ9NZ01 308 aaKnown RBP7.76□□□□□ -1.17
CLK3-205ENST00000561673 SELENOKQ9Y6D0 94 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 RYR2Q92736 4967 aa7.76□□□□□ -1.17
CLK3-205ENST00000561673 TMEM213A2RRL7 107 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 HPGDSO60760 199 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 SERPINE2P07093 398 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 CD7P09564 240 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 TRAPPC2P0DI81 140 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 TRAPPC2BP0DI82 140 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 OR13C7P0DN81 318 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 LYL1P12980 280 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 ELK1P19419 428 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 PTBP1P26599 531 aaKnown RBP eCLIP7.75□□□□□ -1.17
CLK3-205ENST00000561673 G6PCP35575 357 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 RORCP51449 518 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 TSPAN5P62079 268 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 WT1-ASQ06250 92 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 GUCA2BQ16661 112 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 PHLDA2Q53GA4 152 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 TM4SF20Q53R12 229 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 LAX1Q8IWV1 398 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 CADM3Q8N126 398 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 DEFB125Q8N687 156 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 OR1L8Q8NGR8 309 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 ZNF502Q8TBZ5 544 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 WDR89Q96FK6 387 aaPredicted RBP7.75□□□□□ -1.17
CLK3-205ENST00000561673 SPATA25Q9BR10 227 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 PLEKHA3Q9HB20 300 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 SCPEP1Q9HB40 452 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 NDUFA4L2Q9NRX3 87 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 NSG2Q9Y328 171 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 OR51B2Q9Y5P1 312 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 DNAH1Q9P2D7 4330 aa7.75□□□□□ -1.17
CLK3-205ENST00000561673 IGHV3-35A0A0C4DH35 117 aa7.74□□□□□ -1.17
CLK3-205ENST00000561673 TPPPO94811 219 aa7.74□□□□□ -1.17
CLK3-205ENST00000561673 GPR183P32249 361 aa7.74□□□□□ -1.17
CLK3-205ENST00000561673 MFAP2P55001 183 aa7.74□□□□□ -1.17
CLK3-205ENST00000561673 THOC7Q6I9Y2 204 aaKnown RBP7.74□□□□□ -1.17
CLK3-205ENST00000561673 SLC25A24Q6NUK1 477 aa7.74□□□□□ -1.17
CLK3-205ENST00000561673 LPCAT3Q6P1A2 487 aa7.74□□□□□ -1.17
CLK3-205ENST00000561673 UNQ9165/PRO28630Q6UXU0 137 aa7.74□□□□□ -1.17
CLK3-205ENST00000561673 LINC00322Q6ZN03 302 aaPredicted RBP7.74□□□□□ -1.17
CLK3-205ENST00000561673 GDPD1Q8N9F7 314 aa7.74□□□□□ -1.17
CLK3-205ENST00000561673 UXS1Q8NBZ7 420 aa7.74□□□□□ -1.17
CLK3-205ENST00000561673 HINT2Q9BX68 163 aa7.74□□□□□ -1.17
CLK3-205ENST00000561673 NAA50Q9GZZ1 169 aaKnown RBP7.74□□□□□ -1.17
CLK3-205ENST00000561673 EDA2RQ9HAV5 297 aa7.74□□□□□ -1.17
CLK3-205ENST00000561673 SLC2A8Q9NY64 477 aa7.74□□□□□ -1.17
CLK3-205ENST00000561673 THYN1Q9P016 225 aa7.74□□□□□ -1.17
CLK3-205ENST00000561673 MLXQ9UH92 298 aa7.74□□□□□ -1.17
CLK3-205ENST00000561673 RBMY1BA6NDE4 496 aaKnown RBP7.73□□□□□ -1.17
CLK3-205ENST00000561673 RBMY1EA6NEQ0 496 aaKnown RBP7.73□□□□□ -1.17
CLK3-205ENST00000561673 OR2T8A6NH00 312 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 DBX1A6NMT0 343 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 A8MWP6 167 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 OR11H12B2RN74 326 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 SNAPC5O75971 98 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 RBMY1DP0C7P1 496 aaKnown RBP7.73□□□□□ -1.17
CLK3-205ENST00000561673 SMIM18P0DKX4 95 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 RCVRNP35243 200 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 UCP3P55916 312 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 CTF1Q16619 201 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 ZNF57Q68EA5 555 aaPredicted RBP7.73□□□□□ -1.17
CLK3-205ENST00000561673 MZT2AQ6P582 158 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 PLET1Q6UQ28 207 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 HSD17B13Q7Z5P4 300 aaPredicted RBP7.73□□□□□ -1.17
CLK3-205ENST00000561673 TBC1D26Q86UD7 250 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 TMEM61Q8N0U2 210 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 VN1R17PQ8TDU5 208 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 LSM10Q969L4 123 aaKnown RBP7.73□□□□□ -1.17
CLK3-205ENST00000561673 ZNF436Q9C0F3 470 aaPredicted RBP7.73□□□□□ -1.17
CLK3-205ENST00000561673 WFDC10AQ9H1F0 79 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 KLK11Q9UBX7 282 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 PRNDQ9UKY0 176 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 CEPT1Q9Y6K0 416 aa7.73□□□□□ -1.17
CLK3-205ENST00000561673 IGHV3-21A0A0B4J1V1 117 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 FAM25AB3EWG3 89 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 FAM25CB3EWG5 89 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 FAM25GB3EWG6 89 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 M0QYG6 137 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 CYB5BO43169 146 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms