RNA–Protein interactions for RNA: ENST00000561440.1

RPS17-210, Transcript of ribosomal protein S17, human

TSL 2

Gene RPS17, Length 1,922 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS17-210	ENST00000561440	PFN1	P07737	140 aa	Known RBP	13.76	□□□□□ -0.21
RPS17-210	ENST00000561440	CDX1	P47902	265 aa	Predicted RBP	13.76	□□□□□ -0.21
RPS17-210	ENST00000561440	ZNF343	Q6P1L6	599 aa		13.76	□□□□□ -0.21
RPS17-210	ENST00000561440	MRPL41	Q8IXM3	137 aa	Known RBP	13.76	□□□□□ -0.21
RPS17-210	ENST00000561440	OR4C13	Q8NGP0	309 aa		13.76	□□□□□ -0.21
RPS17-210	ENST00000561440	TMEM167A	Q8TBQ9	72 aa		13.76	□□□□□ -0.21
RPS17-210	ENST00000561440	RPUSD4	Q96CM3	377 aa	Known RBP	13.76	□□□□□ -0.21
RPS17-210	ENST00000561440	TGIF2-C20orf24	A0A0A6YYL0	155 aa		13.76	□□□□□ -0.21
RPS17-210	ENST00000561440	ATXN7	O15265	892 aa	Predicted RBP	13.76	□□□□□ -0.21
RPS17-210	ENST00000561440	IGHV3-7	P01780	117 aa		13.76	□□□□□ -0.21
RPS17-210	ENST00000561440	CD3E	P07766	207 aa		13.76	□□□□□ -0.21
RPS17-210	ENST00000561440	OR9G1	Q8NH87	305 aa		13.76	□□□□□ -0.21
RPS17-210	ENST00000561440	LY96	Q9Y6Y9	160 aa		13.76	□□□□□ -0.21
RPS17-210	ENST00000561440	SPTBN4	Q9H254	2564 aa		13.75	□□□□□ -0.21
RPS17-210	ENST00000561440	TEX50	A0A1B0GTY4	177 aa		13.75	□□□□□ -0.21
RPS17-210	ENST00000561440	RBP4	P02753	201 aa		13.75	□□□□□ -0.21
RPS17-210	ENST00000561440	SAA1	P0DJI8	122 aa	Predicted RBP	13.75	□□□□□ -0.21
RPS17-210	ENST00000561440	AREG	P15514	252 aa		13.75	□□□□□ -0.21
RPS17-210	ENST00000561440	RPS16	P62249	146 aa	Known RBP	13.75	□□□□□ -0.21
RPS17-210	ENST00000561440	ERH	P84090	104 aa	Known RBP	13.75	□□□□□ -0.21
RPS17-210	ENST00000561440	TMEM155	Q4W5P6	130 aa		13.75	□□□□□ -0.21
RPS17-210	ENST00000561440	MIC13	Q5XKP0	118 aa		13.75	□□□□□ -0.21
RPS17-210	ENST00000561440	C16orf82	Q7Z2V1	217 aa		13.75	□□□□□ -0.21
RPS17-210	ENST00000561440	FLYWCH2	Q96CP2	140 aa	Known RBP	13.75	□□□□□ -0.21
RPS17-210	ENST00000561440	SCNM1	Q9BWG6	230 aa		13.75	□□□□□ -0.21
RPS17-210	ENST00000561440		E7EQL1	145 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	DLX6	P56179	175 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	LCN2	P80188	198 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	UTF1	Q5T230	341 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	KCNIP4	Q6PIL6	250 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	IQCF2	Q8IXL9	164 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	STPG3	Q8N7X2	389 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	ST6GALNAC6	Q969X2	333 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	COMMD5	Q9GZQ3	224 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	TMEM167B	Q9NRX6	74 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	DCAF16	Q9NXF7	216 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	SLC45A2	Q9UMX9	530 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	WASHC3	Q9Y3C0	194 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	URGCP-MRPS24	S4R325	110 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	ZGRF1	Q86YA3	2104 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	PLCE1	Q9P212	2302 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	HMGB3	O15347	200 aa	Known RBP	13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	TYMS	P04818	313 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	RPL8	P62917	257 aa	Known RBP	13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	OR51G1	Q8NGK1	321 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	C11orf52	Q96A22	123 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	C1orf159	Q96HA4	380 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	HARBI1	Q96MB7	349 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	NABP2	Q9BQ15	211 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	MRPL20	Q9BYC9	149 aa	Known RBP	13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	NDUFA4L2	Q9NRX3	87 aa		13.74	□□□□□ -0.21
RPS17-210	ENST00000561440	PTPRZ1	P23471	2315 aa	Predicted RBP	13.73	□□□□□ -0.21
RPS17-210	ENST00000561440	IGHV1-69-2	A0A0G2JMI3	117 aa		13.73	□□□□□ -0.21
RPS17-210	ENST00000561440	GGCT	O75223	188 aa	Known RBP	13.73	□□□□□ -0.21
RPS17-210	ENST00000561440	ARL14EPL	P0DKL9	152 aa		13.73	□□□□□ -0.21
RPS17-210	ENST00000561440	RNASE2	P10153	161 aa	Known RBP	13.73	□□□□□ -0.21
RPS17-210	ENST00000561440	LOX	P28300	417 aa	Predicted RBP	13.73	□□□□□ -0.21
RPS17-210	ENST00000561440	GALR1	P47211	349 aa		13.73	□□□□□ -0.21
RPS17-210	ENST00000561440	LGALS7	P47929	136 aa		13.73	□□□□□ -0.21
RPS17-210	ENST00000561440	SUB1	P53999	127 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
RPS17-210	ENST00000561440	FAM3B	P58499	235 aa	Predicted RBP	13.73	□□□□□ -0.21
RPS17-210	ENST00000561440	DNLZ	Q5SXM8	178 aa		13.73	□□□□□ -0.21
RPS17-210	ENST00000561440	OR10X1	Q8NGY0	326 aa		13.73	□□□□□ -0.21
RPS17-210	ENST00000561440	UHRF2	Q96PU4	802 aa		13.73	□□□□□ -0.21
RPS17-210	ENST00000561440	HIST1H2BK	O60814	126 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	HIST1H2BJ	P06899	126 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	HIST1H2BO	P23527	126 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	GCHFR	P30047	84 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	HIST1H2BB	P33778	126 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	CA7	P43166	264 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	HIST1H2BD	P58876	126 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	HIST1H2BC	P62807	126 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	CD69	Q07108	199 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	HIST2H2BE	Q16778	126 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	HLA-DRB5	Q30154	266 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	CCL17	Q92583	94 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	HIST1H2BH	Q93079	126 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	HIST1H2BN	Q99877	126 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	HIST1H2BM	Q99879	126 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	MRPL32	Q9BYC8	188 aa	Known RBP	13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	CACNA1A	O00555	2505 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	TRAV9-1	A0A075B6T8	112 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	SRRM4	A7MD48	611 aa	Known RBP	13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	DVL1	O14640	695 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	IGKV1-16	P04430	117 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	TAS2R45	P59539	299 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	VMA21	Q3ZAQ7	101 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	PQLC2	Q6ZP29	291 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	GATAD1	Q8WUU5	269 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	PATZ1	Q9HBE1	687 aa	Known RBP	13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	FUT9	Q9Y231	359 aa		13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	YLPM1	P49750	1951 aa	Known RBP	13.72	□□□□□ -0.21
RPS17-210	ENST00000561440	RIF1	Q5UIP0	2472 aa	Known RBP	13.71	□□□□□ -0.21
RPS17-210	ENST00000561440		C9JCJ5	164 aa		13.71	□□□□□ -0.21
RPS17-210	ENST00000561440	LINC00869	P0C866	280 aa		13.71	□□□□□ -0.21
RPS17-210	ENST00000561440	CCL3L1	P16619	93 aa		13.71	□□□□□ -0.21
RPS17-210	ENST00000561440	GNB1	P62873	340 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms